Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.1e-217 759.6 381 100.0
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 7.1e-159 564.3 349 80.5
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 3.5e-158 562.0 325 85.5
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 7.8e-158 560.8 382 75.7
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.3e-157 559.3 324 84.9
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 2.5e-156 555.8 381 75.3
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 2.1e-155 552.7 347 78.7
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.8e-154 549.7 374 73.8
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 1.8e-154 549.7 322 85.1
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 1.2e-153 547.0 381 73.0
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 4.4e-153 545.0 381 73.5
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 9.9e-153 543.9 324 82.7
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.9e-152 542.3 381 72.2
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 4.9e-152 541.6 348 77.3
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 4.9e-152 541.6 324 82.4
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 6.4e-152 541.2 329 81.2
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 3.2e-151 538.9 348 77.3
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 1.0e-149 533.9 356 76.7
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 3.9e-149 531.9 347 76.9
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 2.5e-148 529.3 359 74.7
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 3.3e-148 528.9 349 75.6
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.3e-148 528.5 348 75.0
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.6e-147 526.6 390 71.0
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 3.6e-147 525.4 341 75.7
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.4e-146 523.5 380 71.6
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 3.1e-146 522.3 326 78.2
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.2e-145 520.4 348 73.6
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 2.6e-145 519.2 362 72.1
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.7e-144 516.5 381 70.9
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.7e-144 516.5 384 69.3
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 8.4e-144 514.2 340 73.2
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.9e-143 513.1 323 77.7
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 2.7e-142 509.2 380 68.9
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 7.9e-142 507.7 323 76.5
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 1.0e-141 507.3 350 72.3
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 1.3e-141 506.9 357 71.4
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.8e-141 506.5 379 68.1
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 5.1e-141 505.0 387 69.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 6.7e-141 504.6 336 73.8
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 1.1e-140 503.8 330 75.8
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 1.5e-140 503.4 367 69.5
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.5e-140 503.4 381 68.0
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.3e-140 502.3 382 67.5
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 4.3e-140 501.9 324 77.5
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 4.3e-140 501.9 335 72.8
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.6e-139 500.0 330 75.2
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.1e-138 497.3 380 66.8
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 9.0e-138 494.2 346 71.1
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.2e-137 493.8 346 70.8
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.2e-137 493.8 346 70.8
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 2.0e-137 493.0 463 59.0
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 2.6e-137 492.7 326 74.5
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.2e-134 483.8 342 68.7
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 1.6e-134 483.4 344 68.0
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 2.1e-134 483.0 324 71.9
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 1.5e-132 476.9 281 84.3
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.5e-132 476.9 334 71.3
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 3.3e-132 475.7 357 66.1
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.8e-130 469.9 376 67.0
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.4e-127 460.3 337 70.9
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.6e-126 456.8 347 69.5
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 2.3e-125 453.0 332 71.1
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 5.7e-124 448.4 315 71.7
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 5.0e-120 435.3 369 64.0
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 2.1e-118 429.9 314 68.8
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 6.7e-117 424.9 273 77.3
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 4.2e-111 405.6 323 61.9
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 9.4e-111 404.4 325 60.6
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 9.7e-108 394.4 279 67.7
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.2e-107 393.3 269 72.5
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 5.0e-104 382.1 292 66.4
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.1e-98 364.4 330 52.4
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.4e-98 364.0 333 62.8
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.7e-91 339.3 279 64.2
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 1.2e-89 334.3 235 71.9
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 1.7e-88 330.5 379 50.1
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 8.0e-78 295.0 334 47.3
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 3.0e-77 293.1 206 67.0
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 4.0e-77 292.7 189 76.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 4.4e-76 289.3 245 61.2
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 7.5e-76 288.5 322 48.1
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 4.9e-75 285.8 327 44.6
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.5e-71 273.5 233 60.1
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 4.7e-70 269.2 177 71.8
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.1e-66 258.1 213 61.5
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 2.3e-64 250.4 251 54.2
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 3.0e-64 250.0 396 38.1
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 3.9e-64 249.6 259 53.7
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 1.1e-63 248.1 254 53.1
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 6.4e-59 232.3 221 52.9
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 7.1e-58 228.8 339 38.3
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.7e-51 206.5 307 38.8
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.1e-49 200.7 308 38.0
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 2.1e-49 200.7 308 38.6
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.6e-46 191.0 339 34.8
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 4.7e-46 189.5 121 78.5
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 5.2e-45 186.0 313 36.1
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 2.6e-44 183.7 355 36.1
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 4.9e-43 179.5 142 65.5
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.4e-42 177.2 157 62.4
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 1.6e-41 174.5 318 33.0
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 3.5e-41 173.3 94 89.4
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.0e-40 171.8 205 49.3
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.6e-38 164.5 311 34.7
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.6e-36 157.1 103 69.9
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 7.1e-34 149.1 142 55.6
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 3.5e-33 146.7 138 55.8
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 2.4e-29 134.0 129 52.7
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.0e-28 131.0 174 42.5
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 4.0e-21 106.7 84 63.1
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.3e-19 101.7 56 89.3
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 6.5e-19 99.4 56 87.5
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 3.5e-17 93.6 243 27.2
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 6.2e-14 82.8 244 27.5
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 6.9e-13 79.3 232 24.6
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.2e-12 78.6 59 62.7
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 2.6e-12 77.4 144 36.8
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 4.5e-12 76.6 58 65.5
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 6.5e-11 72.8 53 62.3
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.4e-10 71.6 238 24.8
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.5e-10 70.9 233 27.0
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 7.9e-09 65.9 244 26.2
GSVIVG01013797001 Vitis vinifera HOM05D005748 ORTHO05D007123 1.6e-06 58.2 125 33.6
Aqoxy6G01753 Aquilegia oxysepala HOM05D003793 ORTHO05D004471 2.2e-06 57.8 147 33.3
Duzib248G1559 Durio zibethinus HOM05D005748 ORTHO05D007123 2.2e-06 57.8 156 26.3
TAR622G1138 Trochodendron aralioides HOM05D005748 ORTHO05D007123 2.2e-06 57.8 116 31.9
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 3.7e-06 57.0 165 29.7
Lalb_Chr05g0211181 Lupinus albus HOM05D003793 ORTHO05D004471 4.8e-06 56.6 170 27.1


User provided reference genes

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