Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-172 607.8 358 100.0
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-108 397.5 309 71.2
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-95 353.2 494 49.4
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-90 337.0 509 50.5
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-86 321.6 487 55.9
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-63 247.3 519 48.9
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-60 235.3 272 45.2
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-57 225.3 272 43.4
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-54 216.9 341 46.0
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-54 216.1 109 94.5
Lj1A8T48 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-52 208.8 194 55.7
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-51 205.7 207 48.8
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 7.8e-51 205.3 269 40.5
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-49 201.1 292 39.4
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-49 200.7 503 40.0
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-49 199.9 292 38.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-49 199.1 227 45.8
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-48 198.0 230 43.5
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-48 196.8 292 38.4
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-48 195.7 264 39.8
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-47 193.4 203 48.3
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-47 193.4 293 37.9
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-46 190.3 234 42.7
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-46 189.9 234 41.0
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-46 189.9 256 39.1
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-45 185.7 106 85.8
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-44 182.6 216 45.4
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-43 180.6 239 40.6
Lj4C435T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-43 178.7 230 55.7
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-42 177.2 234 39.3
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-39 167.5 236 41.1
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-39 167.5 218 38.5
Lj9C53T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-39 167.2 162 50.6
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-38 164.5 271 35.8
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-38 164.5 255 39.2
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-35 154.1 208 41.3
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 5.1e-34 149.4 220 37.3
Lj7C368T6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-32 142.5 129 51.2
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-32 142.5 220 37.3
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-31 139.8 197 38.6
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-30 137.1 85 75.3
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-30 136.7 230 36.1
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-29 134.0 223 33.6
Lj2C883T0 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-29 134.0 129 48.8
Lj8P625T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-29 134.0 57 100.0
Lj4A52T44 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-28 130.2 127 48.8
Lj4A452T5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-28 129.4 138 47.8
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-28 129.0 226 34.1
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-28 128.6 95 56.8
Lj1A171T29 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-27 127.5 122 48.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-27 125.6 213 32.9
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-26 125.2 156 40.4
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-26 125.2 206 37.4
Lj7C349T8 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-26 123.2 104 52.9
Lj1A171T30 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-24 116.3 71 69.0
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-24 115.9 272 29.8
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-23 115.2 169 37.9
Lj2A512T36 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-23 114.8 71 67.6
Lj2C47G9 Lonicera japonica HOM05D000176 ORTHO05D235791 5.3e-23 112.8 81 72.8
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-23 112.5 173 37.0
Lj2P387T42 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-22 111.7 65 67.7
Lj1A609T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-22 111.3 144 38.2
Lj2A762T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-22 109.8 64 85.9
Lj4A246T82 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-21 108.2 72 63.9
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-20 103.2 227 33.5
Lj9P676T51 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-20 103.2 70 64.3
Lj4C621T9 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-20 102.1 167 36.5
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-19 101.3 76 55.3
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-19 100.9 174 32.8
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 2.1e-19 100.9 205 29.8
Lj2A197T66 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-19 99.4 64 67.2
Lj5A195T79 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-19 99.4 67 64.2
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-18 98.6 71 63.4
Lju41C46T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-18 98.6 232 30.6
Lj7C702T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-18 97.8 64 65.6
Lj9A187T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-18 97.1 64 65.6
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 5.1e-18 96.3 206 28.2
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.5e-17 94.7 273 27.8
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-17 94.4 204 30.4
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-17 94.4 74 52.7
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 2.0e-17 94.4 74 58.1
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-17 93.2 145 35.2
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-17 92.8 207 32.4
Lj1C600T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-16 91.7 70 57.1
Lj6P257T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-16 91.3 61 65.6
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-16 91.3 145 33.8
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-16 90.9 168 34.5
Lju170A10G17 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-16 90.9 140 32.9
Lj4C452T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-16 90.5 73 56.2
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-16 89.4 94 43.6
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-15 88.2 145 33.8
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 2.4e-15 87.4 182 29.7
Lj4C483T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-15 87.4 104 38.5
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.2e-14 85.1 268 23.5
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-14 84.7 184 30.4
Lj3A910T42 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-14 84.7 164 34.8
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.0e-14 84.3 178 29.2
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-14 84.0 176 34.1
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-14 83.6 123 36.6
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.2e-13 80.9 221 26.7
Lj1E569T0 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 80.5 68 45.6
Lj4C456T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 80.5 118 70.3
Lj2C799T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-12 78.2 62 58.1
Lj2A942G28 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-12 77.8 87 41.4
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 2.5e-12 77.4 168 29.8
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-12 77.4 130 31.5
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-12 75.9 208 26.4
Lj4C435T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-11 74.3 118 69.5
Lj7A594T54 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-11 73.9 65 52.3
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 2.7e-11 73.9 268 23.9
Lj2A163T67 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-11 73.2 137 38.0
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 4.7e-11 73.2 270 25.2
Lj2A888T20 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-11 72.8 54 64.8
Lj7A368T39 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-11 72.8 66 47.0
Lj4P278T38 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 72.4 33 97.0
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.0e-10 72.0 245 23.7
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-10 71.6 111 41.4
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-10 70.9 195 25.1
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 6.7e-10 69.3 129 34.1
Lj4P206T17 Lonicera japonica HOM05D000176 ORTHO05D000106 8.8e-10 68.9 33 90.9
Lj8A550T28 Lonicera japonica HOM05D000176 ORTHO05D000106 8.8e-10 68.9 78 43.6
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.6e-09 67.4 270 25.2
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 3.3e-09 67.0 64 42.2
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.3e-09 67.0 258 26.0
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 4.4e-09 66.6 182 26.4
Ca_07562_v3 Cicer arietinum L. HOM05D003576 ORTHO05D004124 4.4e-09 66.6 152 28.9
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.4e-09 66.6 272 25.7
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-09 66.6 69 44.9
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 5.7e-09 66.2 250 23.2
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 66.2 69 44.9
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 7.4e-09 65.9 69 43.5
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 9.7e-09 65.5 250 23.2
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 9.7e-09 65.5 250 23.6
CSS0042022 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.7e-09 65.5 61 50.8
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.3e-08 65.1 63 47.6
Ah.01g016340 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.3e-08 65.1 63 47.6
Lj7C461T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-08 64.3 64 48.4
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 3.7e-08 63.5 217 28.1
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 4.8e-08 63.2 63 46.0
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 4.8e-08 63.2 192 26.0
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 62.8 99 39.4
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 62.8 72 40.3
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 8.2e-08 62.4 242 24.4
CSS0031463 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.2e-08 62.4 61 50.8
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-08 62.4 38 71.1
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-07 62.0 242 24.0
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-07 62.0 242 24.0
CSS0021450 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.8e-07 61.2 61 50.8
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 4.1e-07 60.1 243 24.3
Lj5C240T12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-07 60.1 48 54.2
Lj8C735T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-07 60.1 61 44.3
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 5.3e-07 59.7 63 44.4
Lj2A845T15 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-07 58.9 38 68.4
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-06 58.2 62 41.9
Ca_26998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-06 57.8 74 40.5
EL10Ac1g01303 Beta vulgaris HOM05D000176 ORTHO05D000106 2.6e-06 57.4 85 35.3
Hma1.2p1_0353F.1_g133150 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.6e-06 57.4 78 38.5
CSS0002983 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.5e-06 57.0 61 45.9
Ca_02570_v3 Cicer arietinum L. HOM05D001569 ORTHO05D002183 3.5e-06 57.0 74 37.8
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.5e-06 57.0 78 38.5
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 4.5e-06 56.6 58 34.5
Lju1295A4T34 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-06 56.6 33 69.7
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-06 56.6 33 69.7
EL10Ac4g08722 Beta vulgaris HOM05D000176 ORTHO05D012560 5.9e-06 56.2 81 35.8
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-06 56.2 33 69.7
Lj9P643T18 Lonicera japonica HOM05D000176 ORTHO05D000106 7.7e-06 55.8 40 67.5


User provided reference genes

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