Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 5.5e-148 527.7 285 100.0
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 3.8e-48 196.1 303 48.8
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 3.7e-43 179.5 306 43.5
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 5.3e-42 175.6 305 43.9
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.2e-41 174.5 299 43.5
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 1.7e-40 170.6 298 43.0
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.2e-40 170.2 294 44.2
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 2.7e-38 163.3 287 43.2
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.1e-36 157.9 300 41.3
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.2e-35 153.7 294 41.2
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 3.7e-35 152.9 293 40.3
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 1.1e-34 151.4 308 39.6
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 2.4e-34 150.2 310 38.7
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 1.2e-33 147.9 300 41.3
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 3.4e-33 146.4 306 38.2
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 4.5e-33 146.0 309 40.1
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 5.9e-33 145.6 310 39.0
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 2.9e-32 143.3 305 39.0
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.9e-31 140.6 299 38.5
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 4.2e-31 139.4 307 39.4
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 5.5e-31 139.0 302 39.1
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 9.4e-31 138.3 300 38.0
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 1.6e-30 137.5 312 38.8
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 3.6e-30 136.3 281 39.1
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 1.8e-29 134.0 310 36.1
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 2.3e-29 133.7 268 41.0
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 5.1e-29 132.5 290 37.2
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 5.1e-29 132.5 296 36.8
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 8.8e-29 131.7 291 33.7
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 5.7e-28 129.0 287 36.9
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.3e-27 127.9 278 40.6
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.8e-27 126.7 279 37.3
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 8.2e-27 125.2 288 37.2
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.1e-26 124.8 281 35.6
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 3.1e-26 123.2 305 36.7
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 3.1e-26 123.2 290 34.5
Peaxi162Scf00105g00615 Petunia axillaris HOM05D003500 ORTHO05D003919 5.3e-26 122.5 301 35.5
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 5.3e-26 122.5 290 34.5
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.0e-26 122.1 293 34.8
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 7.0e-26 122.1 309 35.3
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 9.1e-26 121.7 293 34.8
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 2.6e-25 120.2 292 32.9
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 3.5e-25 119.8 282 37.2
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 3.5e-25 119.8 289 35.6
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 1.0e-24 118.2 291 36.4
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.7e-24 117.5 283 37.1
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.7e-24 117.5 279 36.9
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 2.2e-24 117.1 337 34.4
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 6.5e-24 115.5 285 34.4
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 8.5e-24 115.2 280 37.1
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 1.1e-23 114.8 288 35.1
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.9e-23 114.0 277 35.7
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 1.9e-23 114.0 354 34.7
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 5.5e-23 112.5 354 34.5
Nitab4.5_0000250g0140 Nicotiana tabacum HOM05D003500 ORTHO05D003919 9.4e-23 111.7 307 35.2
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 2.7e-22 110.2 294 34.4
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 8.0e-22 108.6 288 31.9
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 1.0e-21 108.2 286 36.4
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 1.0e-21 108.2 286 35.3
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.4e-21 107.8 288 34.0
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.4e-21 107.8 288 34.7
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 1.4e-21 107.8 279 36.2
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 5.2e-21 105.9 285 34.7
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 1.1e-20 104.8 283 35.7
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 1.1e-20 104.8 233 38.2
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.5e-20 104.4 283 36.7
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 1.5e-20 104.4 276 34.8
Peaxi162Scf01026g00254 Petunia axillaris HOM05D003500 ORTHO05D003919 3.3e-20 103.2 273 35.2
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 3.3e-20 103.2 295 34.9
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 7.4e-20 102.1 339 30.4
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 1.3e-19 101.3 289 33.6
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 2.8e-19 100.1 279 33.7
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 4.8e-19 99.4 299 32.4
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 4.8e-19 99.4 284 34.9
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 6.3e-19 99.0 315 30.8
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 6.3e-19 99.0 278 34.5
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 6.3e-19 99.0 280 31.8
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 8.2e-19 98.6 300 33.3
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 8.2e-19 98.6 280 35.4
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 1.4e-18 97.8 293 33.1
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 1.4e-18 97.8 293 33.1
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 1.8e-18 97.4 310 34.2
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.8e-18 97.4 226 35.4
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 2.4e-18 97.1 288 31.2
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 3.1e-18 96.7 302 33.1
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 4.1e-18 96.3 290 33.8
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 5.3e-18 95.9 284 33.1
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 7.0e-18 95.5 275 31.6
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 9.1e-18 95.1 290 33.1
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 9.1e-18 95.1 306 32.7
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 1.2e-17 94.7 287 33.4
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 1.2e-17 94.7 287 33.8
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.6e-17 94.4 306 34.0
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 2.6e-17 93.6 278 30.6
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 4.5e-17 92.8 299 32.8
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 4.5e-17 92.8 283 32.5
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 4.5e-17 92.8 283 32.5
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 5.9e-17 92.4 293 33.1
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 5.9e-17 92.4 281 31.3
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 7.7e-17 92.0 312 32.1
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 7.7e-17 92.0 295 32.2
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 1.3e-16 91.3 301 31.2
HanXRQChr02g0053631 Helianthus annuus HOM05D003500 ORTHO05D003919 1.7e-16 90.9 282 33.0
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 8.5e-16 88.6 295 33.6
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.1e-15 88.2 291 32.0
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 1.5e-15 87.8 297 31.3
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.5e-15 87.8 290 32.4
unitig_32.g11118 Utricularia gibba HOM05D003500 ORTHO05D003919 1.9e-15 87.4 297 30.6
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 2.5e-15 87.0 283 32.5
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 2.5e-15 87.0 278 33.5
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 5.5e-15 85.9 275 33.5
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 7.2e-15 85.5 304 32.6
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 3.6e-14 83.2 298 31.5
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 4.7e-14 82.8 155 38.1
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 1.8e-13 80.9 286 31.5
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 3.0e-13 80.1 171 36.3
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 5.2e-13 79.3 273 32.2
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 6.8e-13 79.0 276 31.9
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.5e-12 77.8 279 33.3
AL7G19270 Arabidopsis lyrata HOM05D002156 ORTHO05D003919 2.0e-12 77.4 183 33.9
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 3.4e-12 76.6 286 28.7
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 4.4e-12 76.3 281 31.0
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 4.4e-12 76.3 318 30.2
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 7.5e-12 75.5 298 33.2
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 7.5e-12 75.5 316 33.2
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.3e-11 74.7 277 31.4
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.3e-11 74.7 279 30.8
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 2.2e-11 73.9 181 33.7
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 4.8e-11 72.8 191 33.5
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 8.3e-11 72.0 274 32.8
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 8.3e-11 72.0 274 32.5
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 8.3e-11 72.0 314 29.6
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.1e-10 71.6 198 33.3
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 1.4e-10 71.2 193 32.1
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 1.4e-10 71.2 294 32.0
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 1.8e-10 70.9 289 31.1
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 2.4e-10 70.5 274 32.1
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 4.1e-10 69.7 276 30.8
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 4.1e-10 69.7 198 36.4
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 5.3e-10 69.3 274 32.1
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 5.3e-10 69.3 291 30.9
Potri.006G244600 Populus trichocarpa HOM05D003500 ORTHO05D003919 5.3e-10 69.3 252 29.8
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 7.0e-10 68.9 290 29.7
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 9.1e-10 68.6 273 30.0
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.2e-09 68.2 270 30.7
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 1.2e-09 68.2 302 30.8
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 2.0e-09 67.4 189 33.9
Lsat_1_v5_gn_6_63900 Lactuca sativa HOM05D003500 ORTHO05D003919 2.0e-09 67.4 252 28.2
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 3.5e-09 66.6 281 32.7
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 5.9e-09 65.9 226 31.9
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 7.7e-09 65.5 308 29.9
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 7.7e-09 65.5 181 33.7
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 7.7e-09 65.5 274 30.3
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 7.7e-09 65.5 282 27.0
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 1.0e-08 65.1 198 31.8
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 1.7e-08 64.3 325 27.7
Sabra06G0191500 Salix brachista HOM05D003500 ORTHO05D003919 1.7e-08 64.3 178 34.8
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 3.8e-08 63.2 265 31.7
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 8.5e-08 62.0 159 34.6
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.1e-07 61.6 144 33.3
Os01g0863400 Oryza sativa ssp. japonica HOM05D003500 ORTHO05D003919 1.5e-07 61.2 308 26.9
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 1.9e-07 60.8 308 29.2
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 2.5e-07 60.5 274 29.9
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 3.2e-07 60.1 304 28.6
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 5.5e-07 59.3 274 28.5
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 5.5e-07 59.3 309 28.8
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 9.4e-07 58.5 279 30.8
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 9.4e-07 58.5 264 29.9
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 9.4e-07 58.5 314 27.7
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 9.4e-07 58.5 299 30.1
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 1.2e-06 58.2 141 34.8
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.6e-06 57.8 299 30.1
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 2.7e-06 57.0 299 29.4
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 3.6e-06 56.6 311 27.7
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 3.6e-06 56.6 275 32.0
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 3.6e-06 56.6 301 29.2
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 4.7e-06 56.2 175 29.7


User provided reference genes

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