Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A495T42 Lonicera japonica HOM05D004621 ORTHO05D005817 1.1e-65 253.1 125 100.0
Lj8A491G32 Lonicera japonica HOM05D004621 ORTHO05D005817 7.4e-57 223.8 120 93.3
HanXRQChr10g0309801 Helianthus annuus HOM05D004621 ORTHO05D005817 4.7e-35 151.4 85 81.2
GSVIVG01035427001 Vitis vinifera HOM05D004621 ORTHO05D005817 4.7e-35 151.4 119 63.9
ECA234G1492 Erigeron canadensis HOM05D004621 ORTHO05D005817 1.8e-34 149.4 98 71.4
COL.COLO4_21108 Corchorus olitorius HOM05D004621 ORTHO05D005817 6.8e-34 147.5 95 72.6
Dinv12465 Davidia involucrata HOM05D004621 ORTHO05D005817 8.9e-34 147.1 80 83.8
Duzib168G0020 Durio zibethinus HOM05D004621 ORTHO05D005817 1.2e-33 146.7 122 61.5
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 2.6e-33 145.6 128 60.2
DCAR_007741 Daucus carota HOM05D004621 ORTHO05D005817 4.4e-33 144.8 100 72.0
Thecc.09G059300 Theobroma cacao HOM05D004621 ORTHO05D005817 7.5e-33 144.1 121 62.8
Nn6g35569 Nelumbo nucifera HOM05D004621 ORTHO05D005817 2.8e-32 142.1 111 63.1
Manes.16G083500 Manihot esculenta HOM05D004621 ORTHO05D005817 3.7e-32 141.7 96 70.8
ATR0051G016 Amborella trichopoda HOM05D004621 ORTHO05D005817 6.3e-32 141.0 90 73.3
Lsat_1_v5_gn_5_78680 Lactuca sativa HOM05D004621 ORTHO05D005817 6.3e-32 141.0 86 77.9
QL02p000390 Quercus lobata HOM05D004621 ORTHO05D005817 6.3e-32 141.0 113 64.6
Cfa017997 Carpinus fangiana HOM05D004621 ORTHO05D005817 1.1e-31 140.2 93 72.0
Hma1.2p1_0196F.1_g084950 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 1.4e-31 139.8 86 73.3
CAN.G42.5 Capsicum annuum HOM05D004621 ORTHO05D005817 1.8e-31 139.4 92 69.6
Cpa.g.sc126.50 Carica papaya HOM05D004621 ORTHO05D005817 1.8e-31 139.4 92 71.7
Gohir.D05G041600 Gossypium hirsutum HOM05D004621 ORTHO05D005817 1.8e-31 139.4 117 60.7
Rhsim05G0135500 Rhododendron simsii HOM05D004621 ORTHO05D005817 2.4e-31 139.0 125 58.4
TWI32G0723 Tripterygium wilfordii HOM05D004621 ORTHO05D005817 2.4e-31 139.0 105 65.7
Potri.006G224000 Populus trichocarpa HOM05D004621 ORTHO05D005817 3.1e-31 138.7 124 59.7
PGSC0003DMG400008208 Solanum tuberosum HOM05D004621 ORTHO05D005817 3.1e-31 138.7 94 68.1
Atru.chr7.1890 Acer truncatum HOM05D004621 ORTHO05D005817 4.1e-31 138.3 87 75.9
Atru.chr7.1918 Acer truncatum HOM05D004621 ORTHO05D005817 4.1e-31 138.3 87 75.9
ClCG05G018120 Citrullus lanatus HOM05D004621 ORTHO05D005817 4.1e-31 138.3 103 65.0
Cc08_g11070 Coffea canephora HOM05D004621 ORTHO05D005817 4.1e-31 138.3 115 63.5
Haze_18137 Corylus avellana HOM05D004621 ORTHO05D005817 4.1e-31 138.3 93 72.0
Gorai.009G042200 Gossypium raimondii HOM05D004621 ORTHO05D005817 4.1e-31 138.3 117 61.5
Sabra06G0173000 Salix brachista HOM05D004621 ORTHO05D005817 7.0e-31 137.5 85 76.5
CARHR187480 Cardamine hirsuta HOM05D004621 ORTHO05D005817 9.2e-31 137.1 86 74.4
CiPaw.16G067600 Carya illinoinensis HOM05D004621 ORTHO05D005817 9.2e-31 137.1 85 74.1
Eucgr.C00676 Eucalyptus grandis HOM05D004621 ORTHO05D005817 9.2e-31 137.1 87 72.4
Carub.0006s2397 Capsella rubella HOM05D004621 ORTHO05D005817 1.2e-30 136.7 105 65.7
CDE08G0262 Ceratophyllum demersum HOM05D004621 ORTHO05D005817 1.2e-30 136.7 133 54.9
Thhalv10004076m.g Eutrema salsugineum HOM05D004621 ORTHO05D005817 1.2e-30 136.7 84 75.0
Ah.10g034040 Amaranthus hybridus HOM05D004621 ORTHO05D005817 1.6e-30 136.3 112 59.8
Aqoxy2G03981 Aquilegia oxysepala HOM05D004621 ORTHO05D005817 1.6e-30 136.3 87 72.4
AUR62009103 Chenopodium quinoa HOM05D004621 ORTHO05D005817 2.0e-30 136.0 85 72.9
AUR62020569 Chenopodium quinoa HOM05D004621 ORTHO05D005817 2.0e-30 136.0 85 72.9
Ciclev10010180m.g Citrus clementina HOM05D004621 ORTHO05D005817 2.0e-30 136.0 119 60.5
MELO3C016896.2 Cucumis melo HOM05D004621 ORTHO05D005817 2.0e-30 136.0 85 74.1
Aa31LG1G21020 Aethionema arabicum HOM05D004621 ORTHO05D005817 2.7e-30 135.6 84 75.0
Sopen08g017990 Solanum pennellii HOM05D004621 ORTHO05D005817 2.7e-30 135.6 94 66.0
Hma1.2p1_0196F.1_g084970 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 3.5e-30 135.2 78 76.9
PGR031G3863 Punica granatum HOM05D004621 ORTHO05D005817 3.5e-30 135.2 86 74.4
C09p06540 Brassica napus HOM05D004621 ORTHO05D005817 4.5e-30 134.8 86 74.4
BolC2t11942H Brassica oleracea HOM05D004621 ORTHO05D005817 4.5e-30 134.8 93 69.9
RcHm_v2.0_Chr6g0311441 Rosa chinensis HOM05D004621 ORTHO05D005817 4.5e-30 134.8 114 56.1
AT5G26180 Arabidopsis thaliana HOM05D004621 ORTHO05D005817 5.9e-30 134.4 84 76.2
CANSAT21G1762 Cannabis sativa HOM05D004621 ORTHO05D005817 5.9e-30 134.4 91 65.9
A02p39240 Brassica napus HOM05D004621 ORTHO05D005817 7.8e-30 134.0 87 73.6
BraA02t08889Z Brassica rapa HOM05D004621 ORTHO05D005817 7.8e-30 134.0 87 73.6
Sed0025089 Sechium edule HOM05D004621 ORTHO05D005817 7.8e-30 134.0 85 70.6
BcaB07g29951 Brassica carinata HOM05D004621 ORTHO05D005817 1.0e-29 133.7 84 75.0
BcaC04g23605 Brassica carinata HOM05D004621 ORTHO05D005817 1.0e-29 133.7 84 75.0
BolC9t53577H Brassica oleracea HOM05D004621 ORTHO05D005817 1.0e-29 133.7 84 75.0
Gohir.A05G040100 Gossypium hirsutum HOM05D004621 ORTHO05D005817 1.0e-29 133.7 110 62.7
MD15G1053900 Malus domestica HOM05D004621 ORTHO05D005817 1.0e-29 133.7 98 65.3
Os02g0217800 Oryza sativa ssp. japonica HOM05D004621 ORTHO05D005817 1.0e-29 133.7 86 73.3
Sp2g21560 Schrenkiella parvula HOM05D004621 ORTHO05D005817 1.0e-29 133.7 84 73.8
BcaC03g17845 Brassica carinata HOM05D004621 ORTHO05D005817 1.7e-29 132.9 93 68.8
CsaV3_4G035890 Cucumis sativus L. HOM05D004621 ORTHO05D005817 1.7e-29 132.9 85 72.9
AL6G38190 Arabidopsis lyrata HOM05D004621 ORTHO05D005817 2.3e-29 132.5 84 75.0
SalBow4G1696 Salvia bowleyana HOM05D004621 ORTHO05D005817 2.3e-29 132.5 86 73.3
Solyc08g062560.4 Solanum lycopersicum HOM05D004621 ORTHO05D005817 2.3e-29 132.5 94 64.9
A09p05980 Brassica napus HOM05D004621 ORTHO05D005817 2.9e-29 132.1 84 73.8
FvH4_2g31380 Fragaria vesca HOM05D004621 ORTHO05D005817 2.9e-29 132.1 114 57.9
FAN24G3059 Fragaria x ananassa HOM05D004621 ORTHO05D005817 2.9e-29 132.1 114 57.9
C02p58840 Brassica napus HOM05D004621 ORTHO05D005817 3.8e-29 131.7 93 68.8
BcaB04g19746 Brassica carinata HOM05D004621 ORTHO05D005817 5.0e-29 131.3 84 73.8
Sc09g0009990 Simmondsia chinensis HOM05D004621 ORTHO05D005817 6.6e-29 131.0 116 57.8
Migut.A00101 Erythranthe guttata HOM05D004621 ORTHO05D005817 1.5e-28 129.8 92 66.3
PSO210G1875 Papaver somniferum HOM05D004621 ORTHO05D005817 1.9e-28 129.4 106 61.3
Prupe.1G407400 Prunus persica HOM05D004621 ORTHO05D005817 1.9e-28 129.4 86 70.9
FAN20G0813 Fragaria x ananassa HOM05D004621 ORTHO05D005817 5.6e-28 127.9 114 57.0
FAN27G1750 Fragaria x ananassa HOM05D004621 ORTHO05D005817 5.6e-28 127.9 114 56.1
PSO210G2988 Papaver somniferum HOM05D004621 ORTHO05D005817 5.6e-28 127.9 106 60.4
HPP92_023988 Vanilla planifolia HOM05D004621 ORTHO05D005817 5.6e-28 127.9 85 69.4
HPP92_023996 Vanilla planifolia HOM05D004621 ORTHO05D005817 5.6e-28 127.9 85 69.4
Ca_15845_v3 Cicer arietinum L. HOM05D004621 ORTHO05D005817 2.1e-27 125.9 78 74.4
Peaxi162Scf01253g00025 Petunia axillaris HOM05D004621 ORTHO05D005817 2.8e-27 125.6 92 66.3
Nitab4.5_0000286g0110 Nicotiana tabacum HOM05D004621 ORTHO05D005817 3.6e-27 125.2 92 65.2
MSTRG.25978 Avicennia marina HOM05D004621 ORTHO05D005817 4.7e-27 124.8 86 72.1
EL10Ac2g03807 Beta vulgaris HOM05D004621 ORTHO05D005817 1.0e-26 123.6 86 69.8
Nitab4.5_0009148g0020 Nicotiana tabacum HOM05D004621 ORTHO05D005817 1.0e-26 123.6 116 56.9
Medtr3g104760 Medicago truncatula HOM05D004621 ORTHO05D005817 1.8e-26 122.9 78 73.1
Psat5g035360 Pisum sativum HOM05D004621 ORTHO05D005817 2.3e-26 122.5 78 70.5
VMungo1309G3014 Vigna mungo HOM05D004621 ORTHO05D005817 4.0e-26 121.7 108 56.5
TPR.G3533 Trifolium pratense HOM05D004621 ORTHO05D005817 6.8e-26 120.9 85 65.9
arahy.Tifrunner.gnm1.ann1.T7L0BR Arachis hypogaea HOM05D004621 ORTHO05D005817 1.5e-25 119.8 107 54.2
Lalb_Chr11g0063251 Lupinus albus HOM05D004621 ORTHO05D005817 2.0e-25 119.4 78 67.9
Glyma.06G054600 Glycine max HOM05D004621 ORTHO05D005817 2.6e-25 119.0 78 70.5
Phvul.009G080100 Phaseolus vulgaris HOM05D004621 ORTHO05D005817 4.4e-25 118.2 90 61.1
arahy.Tifrunner.gnm1.ann1.I8I12Q Arachis hypogaea HOM05D004621 ORTHO05D005817 5.8e-25 117.9 107 53.3
CBR_g41719 Chara braunii HOM05D004621 ORTHO05D005817 5.8e-25 117.9 85 63.5
Lj1g0023758 Lotus japonicus HOM05D004621 ORTHO05D005817 5.8e-25 117.9 78 67.9
Glyma.04G054300 Glycine max HOM05D004621 ORTHO05D005817 7.5e-25 117.5 78 70.5
Hund19431 Selenicereus undatus HOM05D004621 ORTHO05D005817 9.8e-25 117.1 85 65.9
SEGI_04699 Sequoiadendron giganteum HOM05D004621 ORTHO05D005817 3.7e-24 115.2 81 66.7
SGA_v2.0_scaffold20G09183 Striga asiatica HOM05D004621 ORTHO05D005817 3.7e-24 115.2 84 67.9
unitig_88.g27672 Utricularia gibba HOM05D004621 ORTHO05D005817 1.1e-23 113.6 94 57.4
Pp3c1_12750 Physcomitrium patens HOM05D004621 ORTHO05D005817 2.7e-22 109.0 87 58.6
Mapoly0057s0032 Marchantia polymorpha HOM05D004621 ORTHO05D005817 2.3e-21 105.9 80 65.0
SMO169G0045 Selaginella moellendorffii HOM05D004621 ORTHO05D005817 2.3e-21 105.9 86 58.1
MBI05_g23629_MAGBIO Magnolia biondii HOM05D004621 ORTHO05D005817 6.2e-19 97.8 57 80.7
THA.LOC104811228 Tarenaya hassleriana HOM05D004621 ORTHO05D005817 4.0e-18 95.1 58 74.1
SHI18706 Sapria himalayana HOM05D004621 ORTHO05D005817 2.0e-17 92.8 82 54.9
Cre16.g647602 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D006241 1.7e-16 89.7 86 50.0
MCO11G750 Micromonas commoda HOM05D004621 ORTHO05D005817 8.3e-16 87.4 79 53.2
PRCOL_00003600 Prasinoderma coloniale HOM05D004621 ORTHO05D005817 7.5e-09 64.3 110 36.4


User provided reference genes

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