Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.1e-91 340.1 201 100.0
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 2.2e-42 176.4 207 54.1
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 1.6e-40 170.2 216 51.4
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 4.6e-40 168.7 205 49.3
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 7.3e-38 161.4 131 66.4
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 4.7e-37 158.7 194 49.0
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.4e-36 157.1 195 49.7
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 2.3e-36 156.4 173 50.3
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 4.0e-36 155.6 194 49.5
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.2e-35 154.1 207 48.3
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.0e-35 153.3 134 61.2
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 2.0e-35 153.3 111 68.5
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 2.6e-35 152.9 111 71.2
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 4.4e-35 152.1 215 53.0
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 5.8e-35 151.8 107 69.2
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 7.5e-35 151.4 111 70.3
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 7.5e-35 151.4 103 71.8
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 9.9e-35 151.0 107 72.9
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.3e-34 150.6 114 67.5
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.3e-34 150.6 108 73.1
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.2e-34 149.8 120 64.2
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 2.2e-34 149.8 103 70.9
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.7e-34 149.1 107 69.2
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 4.9e-34 148.7 107 72.0
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 4.9e-34 148.7 107 70.1
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 8.3e-34 147.9 207 46.4
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 8.3e-34 147.9 113 70.8
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.9e-33 146.7 184 54.9
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 1.9e-33 146.7 181 50.3
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 2.4e-33 146.4 201 53.7
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.4e-33 146.4 106 66.0
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.4e-33 146.4 108 65.7
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 2.4e-33 146.4 105 69.5
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 2.4e-33 146.4 179 55.9
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 4.1e-33 145.6 108 65.7
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 4.1e-33 145.6 108 65.7
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 7.1e-33 144.8 114 63.2
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 9.2e-33 144.4 206 44.7
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.2e-32 144.1 201 46.8
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.2e-32 144.1 203 51.2
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.6e-32 143.7 177 48.6
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.6e-32 143.7 177 48.6
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.6e-32 143.7 177 48.6
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 2.1e-32 143.3 202 47.0
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 2.7e-32 142.9 111 64.9
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 3.5e-32 142.5 203 50.2
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 4.6e-32 142.1 131 57.3
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 6.0e-32 141.7 121 62.0
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.0e-31 141.0 103 68.9
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 1.0e-31 141.0 108 66.7
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 1.3e-31 140.6 110 69.1
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.7e-31 140.2 103 68.0
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 2.3e-31 139.8 128 58.6
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 2.3e-31 139.8 197 44.7
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 3.0e-31 139.4 206 43.2
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 5.1e-31 138.7 129 59.7
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 8.6e-31 137.9 110 62.7
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.1e-30 137.5 129 58.9
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.1e-30 137.5 183 50.8
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.1e-30 137.5 128 54.7
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.5e-30 137.1 102 66.7
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 2.5e-30 136.3 130 56.2
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.5e-30 136.3 130 56.2
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.5e-30 136.3 132 62.1
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.6e-30 135.2 132 62.9
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.6e-30 135.2 131 55.0
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.6e-30 135.2 131 55.0
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 5.6e-30 135.2 110 64.5
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 9.5e-30 134.4 177 49.7
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 9.5e-30 134.4 132 61.4
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 1.6e-29 133.7 187 44.4
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 2.1e-29 133.3 185 47.0
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 4.7e-29 132.1 195 43.6
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.1e-28 131.0 103 66.0
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.8e-28 130.2 111 59.5
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.4e-28 129.8 106 62.3
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 8.9e-28 127.9 106 63.2
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.2e-27 127.5 107 63.6
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.5e-27 127.1 131 55.7
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 2.6e-27 126.3 108 60.2
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 2.6e-27 126.3 191 41.9
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.9e-26 122.9 125 56.0
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 3.8e-26 122.5 107 57.0
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 6.4e-26 121.7 107 57.0
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 2.4e-25 119.8 99 57.6
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 1.2e-24 117.5 87 69.0
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.7e-23 113.6 104 55.8
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 2.1e-21 106.7 102 55.9
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 2.1e-21 106.7 93 55.9
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 3.6e-21 105.9 170 40.0
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.5e-19 100.5 69 66.7
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 7.6e-19 98.2 207 39.1
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 4.9e-18 95.5 108 50.0
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 5.6e-14 82.0 153 39.2
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 5.6e-14 82.0 153 39.2
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.1e-13 80.1 53 69.8
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 6.2e-13 78.6 164 34.8
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 8.1e-13 78.2 137 32.8
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.4e-12 77.4 102 42.2
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.4e-12 76.6 39 87.2
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 6.9e-12 75.1 116 38.8
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.9e-10 68.9 81 51.9
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 4.2e-09 65.9 65 60.0
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.4e-09 65.5 60 50.0
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 7.1e-09 65.1 153 37.9
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.6e-08 62.4 62 46.8
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 5.1e-07 58.9 138 34.1


User provided reference genes

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