Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A365T12 Lonicera japonica HOM05D000219 ORTHO05D004649 8.2e-23 109.4 50 100.0
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 1.4e-11 72.0 36 91.7
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 2.5e-11 71.2 36 91.7
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 5.5e-11 70.1 36 88.9
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 5.5e-11 70.1 36 88.9
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 5.5e-11 70.1 36 88.9
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.6e-10 68.6 36 86.1
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 2.1e-10 68.2 36 83.3
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.1e-10 68.2 36 86.1
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 3.6e-10 67.4 36 86.1
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 3.6e-10 67.4 36 86.1
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 3.6e-10 67.4 36 86.1
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 4.7e-10 67.0 36 86.1
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 4.7e-10 67.0 36 86.1
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 6.1e-10 66.6 36 83.3
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 7.9e-10 66.2 36 80.6
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 7.9e-10 66.2 36 77.8
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 7.9e-10 66.2 36 77.8
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.0e-09 65.9 37 81.1
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 80.6
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 80.6
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 77.8
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 80.6
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 80.6
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 80.6
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 83.3
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 83.3
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 83.3
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 83.3
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 1.4e-09 65.5 36 83.3
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 1.8e-09 65.1 36 80.6
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 1.8e-09 65.1 36 80.6
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 1.8e-09 65.1 36 80.6
COL.COLO4_25028 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.8e-09 65.1 47 70.2
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 1.8e-09 65.1 36 77.8
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 2.3e-09 64.7 36 77.8
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 2.3e-09 64.7 36 77.8
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 2.3e-09 64.7 36 80.6
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 2.3e-09 64.7 36 77.8
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 3.0e-09 64.3 36 80.6
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.0e-09 64.3 36 77.8
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 3.0e-09 64.3 36 77.8
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 3.9e-09 63.9 36 77.8
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 3.9e-09 63.9 36 80.6
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 5.1e-09 63.5 36 77.8
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 5.1e-09 63.5 36 80.6
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 5.1e-09 63.5 36 77.8
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 5.1e-09 63.5 36 80.6
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 5.1e-09 63.5 36 75.0
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 5.1e-09 63.5 36 77.8
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 6.7e-09 63.2 36 75.0
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 6.7e-09 63.2 36 77.8
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 6.7e-09 63.2 36 77.8
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 6.7e-09 63.2 36 77.8
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 8.8e-09 62.8 36 77.8
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 8.8e-09 62.8 36 75.0
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 8.8e-09 62.8 36 77.8
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 8.8e-09 62.8 36 72.2
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.1e-08 62.4 36 75.0
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 1.1e-08 62.4 36 75.0
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 1.5e-08 62.0 36 77.8
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.5e-08 62.0 36 75.0
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 1.5e-08 62.0 36 75.0
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 2.0e-08 61.6 39 69.2
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 2.0e-08 61.6 36 80.6
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 2.0e-08 61.6 36 75.0
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 2.0e-08 61.6 36 75.0
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 2.6e-08 61.2 36 75.0
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 3.3e-08 60.8 36 75.0
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 3.3e-08 60.8 36 75.0
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 3.3e-08 60.8 36 77.8
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 3.3e-08 60.8 36 77.8
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 4.4e-08 60.5 36 72.2
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 4.4e-08 60.5 36 77.8
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 4.4e-08 60.5 36 72.2
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 5.7e-08 60.1 36 69.4
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 5.7e-08 60.1 36 69.4
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 5.7e-08 60.1 36 75.0
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 7.4e-08 59.7 35 74.3
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 9.7e-08 59.3 36 75.0
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 9.7e-08 59.3 36 75.0
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 9.7e-08 59.3 36 69.4
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 9.7e-08 59.3 36 72.2
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 1.3e-07 58.9 42 69.0
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 1.3e-07 58.9 42 69.0
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 1.3e-07 58.9 33 78.8
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.3e-07 58.9 33 78.8
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 2.8e-07 57.8 36 63.9
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 2.8e-07 57.8 33 75.8
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 2.8e-07 57.8 33 75.8
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 4.8e-07 57.0 33 78.8
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 4.8e-07 57.0 33 75.8
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 6.3e-07 56.6 36 72.2
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 1.1e-06 55.8 32 75.0
CARHR125240 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.4e-06 55.5 31 74.2
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.4e-06 55.5 36 69.4
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.4e-06 55.5 36 69.4
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 1.8e-06 55.1 36 69.4
Nitab4.5_0005102g0050 Nicotiana tabacum HOM05D000219 ORTHO05D004649 2.4e-06 54.7 31 77.4
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 2.4e-06 54.7 33 72.7
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 2.4e-06 54.7 36 69.4
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 2.4e-06 54.7 36 69.4
PGSC0003DMG401004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 2.4e-06 54.7 33 72.7
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 4.1e-06 53.9 36 69.4


User provided reference genes

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