Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 1.4e-64 249.6 138 100.0
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 6.5e-38 161.0 176 63.6
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 4.9e-33 144.8 93 88.2
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 6.6e-30 134.4 133 59.4
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.4e-24 116.7 140 50.7
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 3.2e-24 115.5 138 49.3
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 3.2e-24 115.5 138 49.3
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 7.0e-24 114.4 138 50.7
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 2.0e-23 112.8 141 48.2
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 7.8e-23 110.9 140 47.1
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 2.3e-22 109.4 143 46.9
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 5.0e-22 108.2 141 46.1
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 6.6e-22 107.8 141 46.1
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 6.6e-22 107.8 141 46.8
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 6.6e-22 107.8 141 46.8
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 1.5e-21 106.7 141 44.7
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 1.5e-21 106.7 141 46.1
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 1.5e-21 106.7 138 46.4
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 1.9e-21 106.3 99 56.6
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 1.9e-21 106.3 137 47.4
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 2.5e-21 105.9 140 44.3
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 3.3e-21 105.5 137 45.3
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 4.3e-21 105.1 137 45.3
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 5.6e-21 104.8 141 46.1
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 5.6e-21 104.8 137 45.3
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 5.6e-21 104.8 141 45.4
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 7.3e-21 104.4 141 44.0
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 7.3e-21 104.4 138 45.7
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 9.5e-21 104.0 141 41.8
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 9.5e-21 104.0 141 45.4
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 1.2e-20 103.6 144 42.4
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 1.6e-20 103.2 140 44.3
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 1.6e-20 103.2 133 48.1
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.6e-20 103.2 143 46.9
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 2.1e-20 102.8 141 45.4
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 2.8e-20 102.4 136 43.4
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 3.6e-20 102.1 140 43.6
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 4.7e-20 101.7 141 45.4
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 4.7e-20 101.7 141 43.3
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 6.1e-20 101.3 141 44.7
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 6.1e-20 101.3 141 44.7
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 6.1e-20 101.3 141 44.7
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 6.1e-20 101.3 141 41.1
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 8.0e-20 100.9 141 41.1
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 1.0e-19 100.5 178 46.6
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 1.0e-19 100.5 141 44.0
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.0e-19 100.5 140 44.3
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.0e-19 100.5 141 46.1
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 1.4e-19 100.1 141 41.8
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 1.4e-19 100.1 141 40.4
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 1.4e-19 100.1 141 41.8
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 4.0e-19 98.6 141 46.8
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 6.8e-19 97.8 143 45.5
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 8.9e-19 97.4 133 44.4
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 8.9e-19 97.4 140 44.3
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 1.2e-18 97.1 140 42.9
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 2.0e-18 96.3 133 41.4
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 2.6e-18 95.9 133 41.4
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 2.6e-18 95.9 133 45.1
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 3.4e-18 95.5 137 43.8
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 4.4e-18 95.1 132 44.7
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 5.8e-18 94.7 137 43.8
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 5.8e-18 94.7 137 43.1
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 5.8e-18 94.7 141 43.3
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 7.5e-18 94.4 137 43.8
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 9.8e-18 94.0 133 44.4
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 9.8e-18 94.0 133 44.4
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 9.8e-18 94.0 133 44.4
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.3e-17 93.6 137 41.6
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.3e-17 93.6 133 39.8
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 1.3e-17 93.6 143 41.3
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.7e-17 93.2 144 41.7
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 2.2e-17 92.8 140 42.9
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.2e-17 92.8 140 42.9
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 2.9e-17 92.4 133 42.1
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 2.9e-17 92.4 136 43.4
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 3.7e-17 92.0 133 41.4
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 3.7e-17 92.0 137 40.9
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.7e-17 92.0 140 42.9
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 4.9e-17 91.7 140 42.9
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 4.9e-17 91.7 140 42.1
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 4.9e-17 91.7 137 42.3
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 4.9e-17 91.7 141 43.3
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 6.4e-17 91.3 137 42.3
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 6.4e-17 91.3 137 42.3
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 6.4e-17 91.3 137 42.3
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 8.3e-17 90.9 133 42.9
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 1.9e-16 89.7 137 41.6
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 1.9e-16 89.7 133 42.9
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 1.9e-16 89.7 133 42.9
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 1.9e-16 89.7 133 41.4
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 1.9e-16 89.7 133 39.8
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 3.2e-16 89.0 141 41.1
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 7.0e-16 87.8 143 39.2
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 2.0e-15 86.3 44 93.2
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 7.8e-15 84.3 126 41.3
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 7.8e-15 84.3 126 41.3
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 1.6e-12 76.6 111 44.1
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 2.1e-12 76.3 128 39.8
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 2.1e-12 76.3 143 35.7
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 2.8e-12 75.9 129 38.8
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 6.2e-12 74.7 129 38.8
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 3.1e-11 72.4 49 77.6
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 2.0e-10 69.7 119 39.5
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 9.8e-10 67.4 93 44.1
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.1e-08 63.9 46 69.6
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 1.4e-08 63.5 50 64.0
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 2.4e-08 62.8 128 34.4
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 1.2e-07 60.5 75 44.0
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 4.6e-07 58.5 47 61.7
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 7.8e-07 57.8 75 42.7
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 7.8e-07 57.8 42 71.4
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 8.6e-06 54.3 40 62.5


User provided reference genes

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