Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 6.9e-47 190.3 95 100.0
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 8.8e-34 146.7 78 92.3
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 3.7e-32 141.4 80 83.8
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 4.8e-32 141.0 80 80.0
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 8.2e-32 140.2 78 84.6
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 8.2e-32 140.2 80 83.8
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 1.8e-31 139.0 78 87.2
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 4.1e-31 137.9 80 81.2
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 4.1e-31 137.9 78 84.6
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 7.0e-31 137.1 78 85.9
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 9.1e-31 136.7 78 82.1
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 9.1e-31 136.7 78 85.9
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 1.2e-30 136.3 78 85.9
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 1.2e-30 136.3 78 83.3
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 1.2e-30 136.3 78 85.9
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 1.6e-30 136.0 83 78.3
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 1.6e-30 136.0 78 79.5
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 1.6e-30 136.0 78 79.5
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 1.6e-30 136.0 78 85.9
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 1.6e-30 136.0 78 85.9
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 1.6e-30 136.0 78 84.6
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 2.0e-30 135.6 83 77.1
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 2.0e-30 135.6 78 83.3
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 2.6e-30 135.2 78 85.9
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 2.6e-30 135.2 78 84.6
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 2.6e-30 135.2 78 84.6
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 2.6e-30 135.2 78 84.6
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 2.6e-30 135.2 78 83.3
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 3.5e-30 134.8 80 81.2
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 3.5e-30 134.8 86 83.7
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 3.5e-30 134.8 78 85.9
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 4.5e-30 134.4 80 78.8
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 4.5e-30 134.4 78 84.6
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 5.9e-30 134.0 80 78.8
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 5.9e-30 134.0 78 82.1
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 7.7e-30 133.7 78 79.5
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.3e-29 132.9 78 80.8
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 2.2e-29 132.1 78 79.5
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 2.2e-29 132.1 78 82.1
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 2.2e-29 132.1 74 87.8
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 2.2e-29 132.1 82 75.6
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 2.2e-29 132.1 78 83.3
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 2.2e-29 132.1 78 80.8
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 2.9e-29 131.7 78 79.5
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 3.8e-29 131.3 78 80.8
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 5.0e-29 131.0 77 83.1
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 6.5e-29 130.6 80 77.5
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 8.5e-29 130.2 80 83.8
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 8.5e-29 130.2 82 74.4
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 8.5e-29 130.2 81 77.8
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 8.5e-29 130.2 78 80.8
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 1.5e-28 129.4 78 79.5
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 1.5e-28 129.4 78 79.5
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.9e-28 129.0 80 77.5
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 1.9e-28 129.0 78 82.1
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 2.5e-28 128.6 79 79.7
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 2.5e-28 128.6 78 80.8
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 2.5e-28 128.6 78 79.5
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 4.2e-28 127.9 78 79.5
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 7.2e-28 127.1 85 75.3
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 9.4e-28 126.7 78 78.2
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 1.2e-27 126.3 73 84.9
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 1.6e-27 125.9 82 79.3
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 2.1e-27 125.6 82 74.4
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 2.1e-27 125.6 78 78.2
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 2.1e-27 125.6 78 74.4
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 3.6e-27 124.8 77 76.6
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 3.6e-27 124.8 78 76.9
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 4.7e-27 124.4 78 78.2
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 8.0e-27 123.6 78 78.2
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 8.0e-27 123.6 72 81.9
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.0e-26 123.2 83 74.7
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 1.0e-26 123.2 82 75.6
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 1.0e-26 123.2 82 75.6
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.4e-26 122.9 85 71.8
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.8e-26 122.5 80 73.8
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 1.8e-26 122.5 77 77.9
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.3e-26 122.1 72 79.2
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 2.3e-26 122.1 78 78.2
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 3.0e-26 121.7 83 73.5
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 3.0e-26 121.7 76 80.3
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 3.0e-26 121.7 78 70.5
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 4.0e-26 121.3 78 75.6
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 4.0e-26 121.3 78 75.6
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 6.7e-26 120.6 76 76.3
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 4.4e-25 117.9 79 75.9
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 1.7e-24 115.9 80 76.2
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 5.3e-23 110.9 74 74.3
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 5.3e-23 110.9 74 74.3
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 2.7e-22 108.6 74 73.0
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 4.5e-22 107.8 69 76.8
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 2.9e-21 105.1 57 84.2
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 8.5e-21 103.6 57 80.7
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 2.5e-20 102.1 77 66.2
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 3.2e-20 101.7 57 82.5
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 4.2e-20 101.3 62 77.4
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 7.2e-20 100.5 78 64.1
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 6.1e-19 97.4 75 64.0
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 9.8e-17 90.1 110 50.0
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.3e-16 89.7 78 57.7
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 2.2e-16 89.0 81 60.5
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 6.3e-16 87.4 78 57.7
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 6.3e-16 87.4 78 57.7
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 3.8e-13 78.2 50 78.0
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.2e-11 73.2 46 80.4
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 5.4e-07 57.8 40 75.0


User provided reference genes

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