Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A15T43 Lonicera japonica HOM05D004076 ORTHO05D004606 1.7e-76 289.3 147 100.0
Dinv44195 Davidia involucrata HOM05D004076 ORTHO05D004606 4.1e-22 108.6 108 51.9
Actinidia39854 Actinidia chinensis HOM05D004076 ORTHO05D004606 5.5e-19 98.2 108 50.0
Lj6A56G23 Lonicera japonica HOM05D004076 ORTHO05D004606 2.1e-18 96.3 105 49.5
GSVIVG01010749001 Vitis vinifera HOM05D004076 ORTHO05D004606 2.1e-18 96.3 104 47.1
Hma1.2p1_0639F.1_g194000 Hydrangea macrophylla HOM05D004076 ORTHO05D004606 6.1e-18 94.7 124 43.5
Rhsim02G0076700 Rhododendron simsii HOM05D004076 ORTHO05D004606 3.7e-15 85.5 108 45.4
TAR633G1822 Trochodendron aralioides HOM05D004076 ORTHO05D004606 9.2e-14 80.9 113 38.1
Lj3A198G30 Lonicera japonica HOM05D004076 ORTHO05D004606 4.5e-13 78.6 111 37.8
Haze_01516 Corylus avellana HOM05D004076 ORTHO05D004606 1.3e-12 77.0 105 38.1
Prupe.1G191700 Prunus persica HOM05D004076 ORTHO05D004606 2.3e-12 76.3 108 42.6
Cfa015154 Carpinus fangiana HOM05D004076 ORTHO05D004606 5.6e-11 71.6 105 36.2
Atru.chr3.1528 Acer truncatum HOM05D004076 ORTHO05D004606 3.6e-10 68.9 108 37.0
Duzib212G0448 Durio zibethinus HOM05D004076 ORTHO05D004606 6.1e-10 68.2 106 38.7
MELO3C011646.2 Cucumis melo HOM05D004076 ORTHO05D004606 8.0e-10 67.8 120 36.7
Eucgr.G00188 Eucalyptus grandis HOM05D004076 ORTHO05D004606 8.0e-10 67.8 99 38.4
ClCG08G004480 Citrullus lanatus HOM05D004076 ORTHO05D004606 1.8e-09 66.6 133 36.1
Sabra17G0020100 Salix brachista HOM05D004076 ORTHO05D004606 1.8e-09 66.6 94 37.2
Thecc.04G186100 Theobroma cacao HOM05D004076 ORTHO05D004606 1.8e-09 66.6 83 43.4
EL10Ac3g05923 Beta vulgaris HOM05D004076 ORTHO05D004606 5.2e-09 65.1 105 39.0
AUR62002294 Chenopodium quinoa HOM05D004076 ORTHO05D004606 5.2e-09 65.1 93 40.9
Potri.007G127800 Populus trichocarpa HOM05D004076 ORTHO05D004606 6.8e-09 64.7 93 39.8
Eucgr.H00375 Eucalyptus grandis HOM05D004076 ORTHO05D004606 8.9e-09 64.3 93 39.8
Nitab4.5_0002475g0040 Nicotiana tabacum HOM05D004076 ORTHO05D004606 2.6e-08 62.8 99 38.4
PGR031G3172 Punica granatum HOM05D004076 ORTHO05D004606 3.4e-08 62.4 87 39.1
Sabra07G0104100 Salix brachista HOM05D004076 ORTHO05D004606 7.5e-08 61.2 83 38.6
CsaV3_6G003850 Cucumis sativus L. HOM05D004076 ORTHO05D004606 9.8e-08 60.8 122 35.2
Nitab4.5_0000313g0050 Nicotiana tabacum HOM05D004076 ORTHO05D004606 1.3e-07 60.5 99 37.4
Sed0018268 Sechium edule HOM05D004076 ORTHO05D004606 1.3e-07 60.5 114 36.8
TWI63G0993 Tripterygium wilfordii HOM05D004076 ORTHO05D004606 1.3e-07 60.5 106 38.7
AUR62015396 Chenopodium quinoa HOM05D004076 ORTHO05D004606 8.3e-07 57.8 93 37.6
Nitab4.5_0009641g0050 Nicotiana tabacum HOM05D004076 ORTHO05D004606 1.1e-06 57.4 104 35.6
Peaxi162Scf00297g01124 Petunia axillaris HOM05D004076 ORTHO05D004606 1.4e-06 57.0 98 34.7
DCAR_027539 Daucus carota HOM05D004076 ORTHO05D004606 3.2e-06 55.8 128 35.2
Nitab4.5_0005003g0040 Nicotiana tabacum HOM05D004076 ORTHO05D004606 3.2e-06 55.8 104 34.6
Nn1g09697 Nelumbo nucifera HOM05D004076 ORTHO05D004606 5.4e-06 55.1 97 38.1
MD04G1007700 Malus domestica HOM05D004076 ORTHO05D004606 7.0e-06 54.7 104 37.5


User provided reference genes

Program Settings