Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 8.2e-85 317.0 159 100.0
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 3.0e-63 245.4 154 77.3
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 8.8e-63 243.8 156 77.6
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 8.8e-63 243.8 158 72.8
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 5.7e-62 241.1 155 74.8
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.3e-61 240.0 159 74.8
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 3.7e-61 238.4 155 74.8
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 3.7e-61 238.4 160 74.4
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 8.3e-61 237.3 155 74.8
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 8.3e-61 237.3 159 74.2
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 1.8e-60 236.1 155 75.5
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 2.4e-60 235.7 150 74.0
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 2.4e-60 235.7 154 72.7
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 4.1e-60 235.0 159 73.6
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 9.1e-60 233.8 159 68.6
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.7e-59 232.3 149 72.5
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 3.5e-59 231.9 156 75.6
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 5.9e-59 231.1 149 73.8
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 7.7e-59 230.7 147 74.1
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 7.7e-59 230.7 149 73.2
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 1.0e-58 230.3 149 71.8
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 1.3e-58 229.9 149 72.5
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 1.3e-58 229.9 154 74.0
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 1.3e-58 229.9 155 73.5
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 1.7e-58 229.6 149 72.5
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 3.8e-58 228.4 147 72.8
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 5.0e-58 228.0 149 74.5
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 5.0e-58 228.0 155 73.5
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 6.6e-58 227.6 154 70.8
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 6.6e-58 227.6 151 71.5
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 8.6e-58 227.3 150 71.3
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.5e-57 226.5 151 70.9
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 1.5e-57 226.5 152 73.7
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 1.5e-57 226.5 159 72.3
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 3.3e-57 225.3 150 74.7
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 3.3e-57 225.3 150 73.3
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 3.3e-57 225.3 153 70.6
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 4.2e-57 224.9 150 70.7
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 5.5e-57 224.6 150 73.3
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 7.2e-57 224.2 150 74.0
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 9.5e-57 223.8 160 72.5
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 9.5e-57 223.8 160 72.5
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 1.2e-56 223.4 148 71.6
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 2.1e-56 222.6 155 72.3
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 2.1e-56 222.6 150 73.3
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 2.1e-56 222.6 151 69.5
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 3.6e-56 221.9 152 68.4
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 3.6e-56 221.9 167 65.9
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 6.1e-56 221.1 150 74.0
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 6.1e-56 221.1 152 70.4
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 8.0e-56 220.7 150 71.3
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 1.0e-55 220.3 157 70.7
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 1.4e-55 219.9 150 66.7
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.3e-55 219.2 155 69.0
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 4.0e-55 218.4 155 69.0
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 5.2e-55 218.0 149 70.5
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 5.2e-55 218.0 147 70.7
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 8.9e-55 217.2 155 71.0
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 1.5e-54 216.5 154 67.5
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.5e-54 216.5 150 69.3
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 2.0e-54 216.1 155 71.6
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 2.6e-54 215.7 152 71.1
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 3.4e-54 215.3 156 71.2
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 3.4e-54 215.3 155 66.5
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 4.4e-54 214.9 149 69.1
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.4e-54 214.9 154 66.9
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 4.4e-54 214.9 147 70.7
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 5.7e-54 214.5 154 70.1
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 5.7e-54 214.5 154 70.1
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 5.7e-54 214.5 152 69.7
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 5.7e-54 214.5 151 70.2
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 7.5e-54 214.2 159 67.3
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 9.8e-54 213.8 155 69.0
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 2.9e-53 212.2 160 64.4
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 2.9e-53 212.2 149 71.1
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 3.7e-53 211.8 155 65.8
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 8.3e-53 210.7 148 71.6
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 8.3e-53 210.7 148 70.9
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 8.3e-53 210.7 155 69.0
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 1.1e-52 210.3 149 67.8
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.4e-52 209.9 154 70.8
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 1.8e-52 209.5 146 67.1
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 4.1e-52 208.4 154 69.5
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 7.0e-52 207.6 155 67.7
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 2.7e-51 205.7 151 65.6
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 1.7e-50 203.0 160 66.2
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.9e-49 199.5 151 61.6
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 7.3e-49 197.6 139 69.1
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 2.1e-48 196.1 155 64.5
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 6.2e-48 194.5 149 65.1
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.0e-47 193.7 135 68.1
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 3.1e-47 192.2 158 64.6
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 3.1e-47 192.2 179 59.8
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 8.9e-47 190.7 160 61.9
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 2.4e-44 182.6 157 56.7
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 7.8e-43 177.6 149 59.1
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 7.8e-43 177.6 149 59.1
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 1.7e-37 159.8 152 55.3
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 6.4e-37 157.9 152 57.9
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 9.2e-36 154.1 96 79.2
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 1.3e-34 150.2 101 74.3
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 3.9e-34 148.7 99 74.7
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 6.2e-32 141.4 141 52.5
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 3.1e-31 139.0 89 71.9
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 7.6e-30 134.4 89 75.3
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 1.3e-26 123.6 78 73.1
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 2.3e-26 122.9 82 74.4
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 2.3e-26 122.9 82 74.4
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 3.3e-25 119.0 82 69.5
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 1.2e-22 110.5 113 54.9
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 1.5e-22 110.2 82 69.5
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 5.8e-22 108.2 67 74.6
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 1.1e-20 104.0 81 66.7
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 2.8e-16 89.4 65 63.1
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 5.8e-14 81.6 95 48.4
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 5.8e-14 81.6 47 72.3
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 3.3e-09 65.9 78 52.6
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 6.2e-08 61.6 130 32.3
Peaxi162Scf00251g01121 Petunia axillaris HOM05D004398 ORTHO05D005268 5.3e-07 58.5 65 43.1
Sed0003647 Sechium edule HOM05D004398 ORTHO05D005268 5.3e-07 58.5 66 40.9
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 5.3e-07 58.5 72 38.9
Nitab4.5_0000508g0250 Nicotiana tabacum HOM05D004398 ORTHO05D005268 6.9e-07 58.2 65 41.5
CAN.G211.13 Capsicum annuum HOM05D004398 ORTHO05D005268 9.0e-07 57.8 65 41.5
MD15G1118400 Malus domestica HOM05D004398 ORTHO05D005268 9.0e-07 57.8 65 40.0
MD08G1142000 Malus domestica HOM05D004398 ORTHO05D005268 1.5e-06 57.0 62 40.3
Potri.018G032400 Populus trichocarpa HOM05D004398 ORTHO05D005268 1.5e-06 57.0 65 40.0
CDE02G1057 Ceratophyllum demersum HOM05D004398 ORTHO05D005268 2.6e-06 56.2 65 41.5
ClCG08G013040 Citrullus lanatus HOM05D004398 ORTHO05D005268 2.6e-06 56.2 66 39.4
MELO3C011228.2 Cucumis melo HOM05D004398 ORTHO05D005268 2.6e-06 56.2 66 39.4
Nn2g11907 Nelumbo nucifera HOM05D004398 ORTHO05D005268 2.6e-06 56.2 71 38.0
Phvul.008G289800 Phaseolus vulgaris HOM05D004398 ORTHO05D005268 2.6e-06 56.2 65 40.0
VMungo0647G1556 Vigna mungo HOM05D004398 ORTHO05D005268 2.6e-06 56.2 65 40.0
Cfa013194 Carpinus fangiana HOM05D004398 ORTHO05D005268 3.4e-06 55.8 65 41.5
Nitab4.5_0002339g0050 Nicotiana tabacum HOM05D004398 ORTHO05D005268 3.4e-06 55.8 65 41.5
CDE01G0001 Ceratophyllum demersum HOM05D004398 ORTHO05D005268 4.5e-06 55.5 65 40.0
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 4.5e-06 55.5 105 37.1
TWI63G1039 Tripterygium wilfordii HOM05D004398 ORTHO05D005268 4.5e-06 55.5 65 38.5
vmacro05203 Vaccinium macrocarpon HOM05D004398 ORTHO05D005268 4.5e-06 55.5 65 40.0
vmacro05207 Vaccinium macrocarpon HOM05D004398 ORTHO05D005268 4.5e-06 55.5 65 40.0
Glyma.02G309600 Glycine max HOM05D004398 ORTHO05D005268 5.8e-06 55.1 65 40.0
Glyma.14G003300 Glycine max HOM05D004398 ORTHO05D005268 5.8e-06 55.1 65 40.0
Gorai.013G110600 Gossypium raimondii HOM05D004398 ORTHO05D005268 5.8e-06 55.1 62 40.3
Lj1g0014596 Lotus japonicus HOM05D004398 ORTHO05D005268 5.8e-06 55.1 65 40.0
Manes.16G118300 Manihot esculenta HOM05D004398 ORTHO05D005268 5.8e-06 55.1 65 38.5
GSVIVG01035773001 Vitis vinifera HOM05D004398 ORTHO05D005268 5.8e-06 55.1 65 40.0
Actinidia20317 Actinidia chinensis HOM05D004398 ORTHO05D005268 7.6e-06 54.7 65 38.5
Phvul.003G131100 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 7.6e-06 54.7 64 40.6
QL12p031735 Quercus lobata HOM05D004398 ORTHO05D005268 7.6e-06 54.7 65 40.0
Hund25700 Selenicereus undatus HOM05D004398 ORTHO05D005268 7.6e-06 54.7 65 38.5
Actinidia13266 Actinidia chinensis HOM05D004398 ORTHO05D005268 9.9e-06 54.3 65 38.5
Ciclev10009736m.g Citrus clementina HOM05D004398 ORTHO05D005268 9.9e-06 54.3 65 40.0
Gohir.D03G064300 Gossypium hirsutum HOM05D004398 ORTHO05D005268 9.9e-06 54.3 65 38.5


User provided reference genes

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