Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 4.6e-219 764.2 372 100.0
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 2.3e-146 522.7 366 69.1
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.3e-145 518.8 394 66.5
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.4e-143 513.5 427 61.1
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.6e-139 500.0 399 63.9
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 3.6e-139 498.8 384 65.9
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 9.7e-137 490.7 393 65.1
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.5e-132 476.9 387 62.0
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 4.2e-132 475.3 394 60.2
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 5.5e-132 474.9 378 62.2
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 9.4e-132 474.2 390 60.5
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 4.7e-131 471.9 374 64.2
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 1.4e-130 470.3 352 65.1
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.4e-130 470.3 352 65.1
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 8.8e-130 467.6 390 62.8
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.2e-129 467.2 336 66.4
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 2.0e-129 466.5 390 60.5
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 9.7e-129 464.2 374 62.6
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.3e-128 463.8 389 59.4
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.3e-128 463.8 396 59.3
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.8e-127 459.9 405 58.5
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 4.1e-127 458.8 376 60.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.3e-127 458.4 376 60.4
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.6e-126 456.8 393 59.8
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.0e-126 456.4 376 59.8
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 3.5e-126 455.7 396 59.6
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 5.9e-126 454.9 397 57.9
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 2.9e-125 452.6 400 59.5
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.9e-124 449.9 374 59.9
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 4.2e-124 448.7 366 60.4
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 6.1e-123 444.9 378 59.3
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 1.4e-122 443.7 397 58.9
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 3.0e-122 442.6 356 60.1
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 5.2e-122 441.8 364 60.7
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.5e-121 440.3 379 58.6
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 4.4e-121 438.7 336 64.0
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 4.8e-120 435.3 422 55.2
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 6.3e-120 434.9 335 62.4
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.1e-119 434.1 372 58.3
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.4e-119 433.7 328 64.0
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 4.1e-119 432.2 392 57.1
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 5.4e-119 431.8 345 60.3
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 7.0e-119 431.4 392 57.7
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 1.6e-118 430.3 356 59.6
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 2.0e-118 429.9 378 57.7
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 3.5e-118 429.1 376 58.8
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 4.5e-118 428.7 377 58.4
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 5.9e-118 428.3 367 58.0
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.0e-117 427.6 333 62.2
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.0e-117 427.6 384 57.8
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.5e-116 423.7 433 51.0
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.9e-116 423.3 381 54.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.4e-114 417.2 376 56.4
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.6e-113 412.9 340 59.1
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.6e-113 412.9 360 58.9
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 6.3e-112 408.3 316 64.9
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 3.1e-111 406.0 342 59.1
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 7.0e-111 404.8 327 59.3
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 6.6e-109 398.3 345 56.8
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.9e-108 396.7 378 52.6
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.9e-108 396.7 378 52.6
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.2e-107 394.0 376 52.7
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.2e-107 394.0 293 65.9
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 1.6e-107 393.7 378 52.4
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.6e-107 392.5 350 54.6
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 3.6e-107 392.5 378 52.1
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 4.7e-107 392.1 352 54.8
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 6.1e-107 391.7 361 54.0
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.0e-106 391.0 352 55.4
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.0e-106 391.0 352 54.5
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.8e-106 390.2 301 62.5
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 5.2e-106 388.7 349 56.7
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 8.9e-106 387.9 341 55.4
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.2e-105 387.5 348 55.2
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 4.4e-105 385.6 330 56.7
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 4.4e-105 385.6 361 53.5
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 4.4e-105 385.6 394 51.5
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 5.7e-105 385.2 350 54.6
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 2.2e-104 383.3 390 51.8
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.4e-103 380.6 330 60.6
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 4.1e-103 379.0 464 46.1
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 5.9e-102 375.2 328 55.2
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.9e-101 372.5 375 52.8
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 5.0e-101 372.1 534 42.5
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 9.5e-100 367.9 367 53.4
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.2e-99 367.5 231 74.0
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.0e-98 364.4 390 51.8
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 4.9e-96 355.5 390 50.8
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 4.1e-95 352.4 312 57.7
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 1.7e-93 347.1 259 62.9
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 5.0e-93 345.5 233 68.7
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 7.5e-89 331.6 334 51.5
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.5e-84 316.6 308 51.9
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 2.5e-84 316.6 285 55.4
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 3.9e-77 292.7 338 44.7
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 8.6e-77 291.6 174 77.0
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.6e-75 287.3 339 44.5
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.6e-73 280.0 350 46.0
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.7e-69 267.3 213 62.0
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.8e-66 257.3 331 42.6
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 3.1e-66 256.5 414 40.8
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 5.6e-52 209.1 351 37.0
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 9.7e-36 155.2 180 47.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.5e-31 140.6 78 80.8
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.4e-18 98.2 74 66.2
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 7.0e-18 95.9 96 54.2
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.8e-16 90.1 79 58.2
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.0e-13 80.5 66 56.1
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 3.7e-11 73.6 59 61.0
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-10 72.0 42 78.6
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.3e-08 65.1 93 39.8
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 5.0e-08 63.2 99 39.4


User provided reference genes

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