Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P723T25 Lonicera japonica HOM05D002651 ORTHO05D002841 8.3e-105 383.6 185 100.0
Dinv08646 Davidia involucrata HOM05D002651 ORTHO05D002841 3.1e-43 179.1 198 49.0
Dinv30134 Davidia involucrata HOM05D002651 ORTHO05D002841 1.2e-39 167.2 186 50.0
GSVIVG01035861001 Vitis vinifera HOM05D002651 ORTHO05D002841 2.4e-35 152.9 195 44.1
CSS0023898 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 6.9e-35 151.4 205 45.4
Actinidia13233 Actinidia chinensis HOM05D002651 ORTHO05D002841 1.0e-30 137.5 192 44.3
Hma1.2p1_0007F.1_g005330 Hydrangea macrophylla HOM05D002651 ORTHO05D002841 5.2e-30 135.2 183 42.6
Cc08_g00600 Coffea canephora HOM05D002651 ORTHO05D002841 2.0e-29 133.3 184 40.8
Actinidia22343 Actinidia chinensis HOM05D002651 ORTHO05D002841 2.6e-26 122.9 193 40.9
TAR383G0556 Trochodendron aralioides HOM05D002651 ORTHO05D002841 4.5e-26 122.1 197 39.1
CSS0024589 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 3.2e-24 115.9 155 43.2
Duzib168G0368 Durio zibethinus HOM05D002651 ORTHO05D002841 2.1e-23 113.2 195 35.9
Nn8g39493 Nelumbo nucifera HOM05D002651 ORTHO05D002841 1.0e-22 110.9 215 34.0
Cfa013143 Carpinus fangiana HOM05D002651 ORTHO05D002841 1.4e-22 110.5 195 35.4
Haze_21516 Corylus avellana HOM05D002651 ORTHO05D002841 1.8e-22 110.2 194 36.6
CiPaw.08G011100 Carya illinoinensis HOM05D002651 ORTHO05D002841 2.6e-21 106.3 198 37.4
QL02p021642 Quercus lobata HOM05D002651 ORTHO05D002841 3.3e-21 105.9 193 37.3
Potri.006G254700 Populus trichocarpa HOM05D002651 ORTHO05D002841 7.0e-19 98.2 190 31.6
QL02p089426 Quercus lobata HOM05D002651 ORTHO05D002841 2.0e-18 96.7 154 37.0
TWI63G1496 Tripterygium wilfordii HOM05D002651 ORTHO05D002841 2.0e-18 96.7 184 34.2
Potri.018G027100 Populus trichocarpa HOM05D002651 ORTHO05D002841 2.7e-18 96.3 193 30.1
COL.COLO4_18861 Corchorus olitorius HOM05D002651 ORTHO05D002841 1.0e-17 94.4 194 34.0
Dinv36497 Davidia involucrata HOM05D002651 ORTHO05D002841 1.7e-17 93.6 140 40.7
MD15G1169900 Malus domestica HOM05D002651 ORTHO05D002841 2.2e-17 93.2 202 33.7
Manes.16G122300 Manihot esculenta HOM05D002651 ORTHO05D002841 2.9e-17 92.8 189 31.7
RcHm_v2.0_Chr6g0297891 Rosa chinensis HOM05D002651 ORTHO05D002841 2.9e-17 92.8 193 31.6
Ciclev10008357m.g Citrus clementina HOM05D002651 ORTHO05D002841 3.8e-17 92.4 159 38.4
vmacro05177 Vaccinium macrocarpon HOM05D002651 ORTHO05D002841 5.0e-17 92.0 164 37.8
FAN15G3098 Fragaria x ananassa HOM05D002651 ORTHO05D002841 4.2e-16 89.0 121 43.0
Prupe.1G481300 Prunus persica HOM05D002651 ORTHO05D002841 1.6e-15 87.0 194 35.1
FAN27G0660 Fragaria x ananassa HOM05D002651 ORTHO05D002841 2.1e-15 86.7 121 42.1
MD00G1144400 Malus domestica HOM05D002651 ORTHO05D002841 2.1e-15 86.7 191 36.1
MD02G1028200 Malus domestica HOM05D002651 ORTHO05D002841 3.6e-15 85.9 152 36.8
Prupe.7G246600 Prunus persica HOM05D002651 ORTHO05D002841 6.1e-15 85.1 142 35.9
Potri.006G067100 Populus trichocarpa HOM05D002651 ORTHO05D002841 8.0e-15 84.7 149 35.6
TWI34G0613 Tripterygium wilfordii HOM05D002651 ORTHO05D002841 8.0e-15 84.7 185 31.9
CSS0039697 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 1.0e-14 84.3 165 33.9
Cpa.g.sc954.3 Carica papaya HOM05D002651 ORTHO05D002841 1.0e-14 84.3 202 32.7
FAN20G1883 Fragaria x ananassa HOM05D002651 ORTHO05D002841 1.0e-14 84.3 121 41.3
Gohir.A05G053700 Gossypium hirsutum HOM05D002651 ORTHO05D002841 1.4e-14 84.0 188 31.4
Thecc.09G024600 Theobroma cacao HOM05D002651 ORTHO05D002841 1.4e-14 84.0 195 29.7
FvH4_2g29010 Fragaria vesca HOM05D002651 ORTHO05D002841 1.8e-14 83.6 121 41.3
Sabra18G0109400 Salix brachista HOM05D002651 ORTHO05D002841 5.2e-14 82.0 134 38.8
Atru.chr7.2429 Acer truncatum HOM05D002651 ORTHO05D002841 8.8e-14 81.3 129 41.1
FAN24G0990 Fragaria x ananassa HOM05D002651 ORTHO05D002841 8.8e-14 81.3 121 40.5
Thecc.09G129600 Theobroma cacao HOM05D002651 ORTHO05D002841 1.5e-13 80.5 177 31.1
arahy.Tifrunner.gnm1.ann1.DW9T57 Arachis hypogaea HOM05D002651 ORTHO05D002841 2.0e-13 80.1 136 33.8
Gorai.009G058400 Gossypium raimondii HOM05D002651 ORTHO05D002841 2.0e-13 80.1 188 31.4
Gohir.D05G057300 Gossypium hirsutum HOM05D002651 ORTHO05D002841 4.4e-13 79.0 188 31.4
vmacro06143 Vaccinium macrocarpon HOM05D002651 ORTHO05D002841 4.4e-13 79.0 197 30.5
FAN23G0328 Fragaria x ananassa HOM05D002651 ORTHO05D002841 7.5e-13 78.2 146 37.0
CANSAT25G0322 Cannabis sativa HOM05D002651 ORTHO05D002841 9.8e-13 77.8 199 34.7
Duzib187G1449 Durio zibethinus HOM05D002651 ORTHO05D002841 9.8e-13 77.8 147 36.7
Peaxi162Scf00870g00021 Petunia axillaris HOM05D002651 ORTHO05D002841 9.8e-13 77.8 182 29.1
Ciclev10008661m.g Citrus clementina HOM05D002651 ORTHO05D002841 1.7e-12 77.0 189 30.2
Glyma.13G158300 Glycine max HOM05D002651 ORTHO05D002841 1.7e-12 77.0 132 37.1
Lalb_Chr13g0301711 Lupinus albus HOM05D002651 ORTHO05D002841 4.8e-12 75.5 189 31.7
Sed0001806 Sechium edule HOM05D002651 ORTHO05D002841 4.8e-12 75.5 136 32.4
PGSC0003DMG400032780 Solanum tuberosum HOM05D002651 ORTHO05D002841 4.8e-12 75.5 179 30.2
Manes.03G014300 Manihot esculenta HOM05D002651 ORTHO05D002841 6.3e-12 75.1 196 30.1
Manes.03G014400 Manihot esculenta HOM05D002651 ORTHO05D002841 6.3e-12 75.1 196 29.6
COL.COLO4_35120 Corchorus olitorius HOM05D002651 ORTHO05D002841 8.3e-12 74.7 108 36.1
Duzib187G1667 Durio zibethinus HOM05D002651 ORTHO05D002841 8.3e-12 74.7 141 32.6
Nitab4.5_0000209g0240 Nicotiana tabacum HOM05D002651 ORTHO05D002841 8.3e-12 74.7 174 30.5
Rhsim03G0249800 Rhododendron simsii HOM05D002651 ORTHO05D002841 1.1e-11 74.3 192 29.2
arahy.Tifrunner.gnm1.ann1.3K6C5E Arachis hypogaea HOM05D002651 ORTHO05D002841 1.4e-11 73.9 113 36.3
FvH4_1g02850 Fragaria vesca HOM05D002651 ORTHO05D002841 1.4e-11 73.9 126 37.3
FAN19G1540 Fragaria x ananassa HOM05D002651 ORTHO05D002841 1.4e-11 73.9 126 37.3
FAN26G1811 Fragaria x ananassa HOM05D002651 ORTHO05D002841 1.4e-11 73.9 126 37.3
FAN28G1386 Fragaria x ananassa HOM05D002651 ORTHO05D002841 1.8e-11 73.6 126 37.3
Glyma.17G112800 Glycine max HOM05D002651 ORTHO05D002841 3.1e-11 72.8 113 38.1
Nitab4.5_0011210g0010 Nicotiana tabacum HOM05D002651 ORTHO05D002841 3.1e-11 72.8 174 29.9
Duzib168G1415 Durio zibethinus HOM05D002651 ORTHO05D002841 5.4e-11 72.0 181 31.5
Phvul.003G166900 Phaseolus vulgaris HOM05D002651 ORTHO05D002841 5.4e-11 72.0 115 39.1
Sed0020435 Sechium edule HOM05D002651 ORTHO05D002841 1.2e-10 70.9 134 30.6
VMungo1215G2417 Vigna mungo HOM05D002651 ORTHO05D002841 2.0e-10 70.1 115 39.1
CANSAT11G0052 Cannabis sativa HOM05D002651 ORTHO05D002841 3.5e-10 69.3 201 28.4
Lj3C846T11 Lonicera japonica HOM05D002651 ORTHO05D002841 4.5e-10 68.9 157 32.5
CAN.G610.51 Capsicum annuum HOM05D002651 ORTHO05D002841 5.9e-10 68.6 180 30.0
Gohir.D06G100366 Gossypium hirsutum HOM05D002651 ORTHO05D002841 5.9e-10 68.6 197 31.0
Gorai.010G115300 Gossypium raimondii HOM05D002651 ORTHO05D002841 5.9e-10 68.6 197 31.0
DCAR_001510 Daucus carota HOM05D002651 ORTHO05D002841 1.0e-09 67.8 125 36.8
Atru.chr7.1120 Acer truncatum HOM05D002651 ORTHO05D002841 1.3e-09 67.4 163 31.9
Cfa003403 Carpinus fangiana HOM05D002651 ORTHO05D002841 3.8e-09 65.9 127 33.9
Gohir.A06G098300 Gossypium hirsutum HOM05D002651 ORTHO05D002841 3.8e-09 65.9 157 33.1
Lalb_Chr07g0179101 Lupinus albus HOM05D002651 ORTHO05D002841 3.8e-09 65.9 136 31.6
Gorai.010G062400 Gossypium raimondii HOM05D002651 ORTHO05D002841 6.5e-09 65.1 142 33.8
Haze_25545 Corylus avellana HOM05D002651 ORTHO05D002841 8.6e-09 64.7 127 33.9
Dinv41490 Davidia involucrata HOM05D002651 ORTHO05D002841 8.6e-09 64.7 84 44.0
Actinidia21967 Actinidia chinensis HOM05D002651 ORTHO05D002841 1.1e-08 64.3 127 31.5
Actinidia26382 Actinidia chinensis HOM05D002651 ORTHO05D002841 1.1e-08 64.3 149 30.9
TAR626G0447 Trochodendron aralioides HOM05D002651 ORTHO05D002841 1.5e-08 63.9 99 36.4
CsaV3_2G032130 Cucumis sativus L. HOM05D002651 ORTHO05D002841 1.9e-08 63.5 180 30.0
Lalb_Chr12g0198041 Lupinus albus HOM05D002651 ORTHO05D002841 1.9e-08 63.5 134 32.1
Oeu031009.1 Olea europaea HOM05D002651 ORTHO05D002841 2.5e-08 63.2 158 27.8
Duzib150G1228 Durio zibethinus HOM05D002651 ORTHO05D002841 3.2e-08 62.8 108 32.4
Eucgr.C02771 Eucalyptus grandis HOM05D002651 ORTHO05D002841 3.2e-08 62.8 190 29.5
Gohir.D06G053400 Gossypium hirsutum HOM05D002651 ORTHO05D002841 5.5e-08 62.0 142 33.1
Actinidia40490 Actinidia chinensis HOM05D002651 ORTHO05D002841 7.2e-08 61.6 133 31.6
Gohir.A06G054500 Gossypium hirsutum HOM05D002651 ORTHO05D002841 7.2e-08 61.6 142 33.1
MBI04_g29337_MAGBIO Magnolia biondii HOM05D002651 ORTHO05D002841 1.2e-07 60.8 130 32.3
Solyc08g059700.2 Solanum lycopersicum HOM05D002651 ORTHO05D002841 1.2e-07 60.8 178 29.8
CiPaw.04G173500 Carya illinoinensis HOM05D002651 ORTHO05D002841 2.1e-07 60.1 117 34.2
Sopen08g009520 Solanum pennellii HOM05D002651 ORTHO05D002841 4.7e-07 58.9 180 30.6


User provided reference genes

Program Settings