Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.0e-137 493.4 247 100.0
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 1.5e-93 346.7 242 72.7
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 9.8e-93 344.0 247 66.0
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 3.7e-92 342.0 242 69.8
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.1e-91 340.5 242 69.4
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.8e-91 339.7 242 69.4
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 1.8e-91 339.7 242 69.4
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 3.1e-91 339.0 247 65.6
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 2.7e-90 335.9 242 67.8
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 1.2e-87 327.0 232 69.0
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.2e-87 327.0 242 64.5
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 2.3e-86 322.8 242 64.9
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 3.0e-86 322.4 242 64.0
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 5.2e-86 321.6 242 64.0
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 5.7e-85 318.2 247 61.9
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.7e-84 316.6 249 64.3
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.8e-84 315.8 241 62.7
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 3.7e-84 315.5 236 66.1
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 6.3e-84 314.7 244 64.3
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 6.3e-84 314.7 242 62.0
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 6.3e-84 314.7 225 67.1
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 2.4e-83 312.8 242 62.0
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 3.1e-83 312.4 242 61.6
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 7.0e-83 311.2 236 64.8
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 9.1e-83 310.8 242 62.4
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.2e-82 310.5 242 61.2
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.2e-82 310.5 242 61.6
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.0e-82 309.7 242 61.2
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 4.5e-82 308.5 234 62.8
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 4.5e-82 308.5 238 63.9
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 7.7e-82 307.8 244 61.9
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 1.0e-81 307.4 249 62.7
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 2.3e-81 306.2 225 66.2
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 2.9e-81 305.8 225 66.2
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 3.8e-81 305.4 235 64.3
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 1.5e-80 303.5 241 59.8
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 4.7e-79 298.5 250 60.8
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 4.0e-78 295.4 249 60.2
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 2.6e-77 292.7 246 59.8
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 2.9e-76 289.3 242 58.3
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 6.6e-73 278.1 239 56.9
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 8.6e-73 277.7 231 60.6
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 8.6e-73 277.7 245 58.0
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 1.1e-72 277.3 238 60.1
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 4.3e-72 275.4 251 55.8
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 9.5e-72 274.2 226 60.2
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 2.8e-71 272.7 226 59.7
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 4.7e-71 271.9 236 58.5
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 6.1e-71 271.6 246 58.1
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 8.0e-71 271.2 236 56.4
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 1.4e-70 270.4 226 59.7
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 6.8e-70 268.1 217 58.5
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 2.0e-69 266.5 235 54.5
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 2.0e-69 266.5 235 54.5
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 2.0e-69 266.5 242 56.2
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 2.6e-69 266.2 235 54.5
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 5.8e-69 265.0 232 58.2
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 2.2e-68 263.1 244 54.5
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 6.4e-68 261.5 194 64.4
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 6.4e-68 261.5 237 56.5
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 8.3e-68 261.2 255 54.5
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 4.1e-67 258.8 196 64.8
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 5.4e-67 258.5 235 54.0
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 5.4e-67 258.5 235 54.0
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 1.2e-66 257.3 238 53.8
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 4.6e-66 255.4 193 61.1
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.3e-65 253.1 194 62.4
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.9e-65 252.3 194 62.4
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.9e-64 250.0 194 60.3
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 9.8e-61 237.7 239 51.9
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 8.3e-60 234.6 232 55.6
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 2.4e-59 233.0 232 49.6
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 5.6e-56 221.9 200 59.0
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 6.0e-50 201.8 242 44.2
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 1.0e-49 201.1 242 41.7
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 1.9e-48 196.8 232 43.1
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 1.3e-44 184.1 233 42.5
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 2.8e-39 166.4 137 59.1
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 2.0e-37 160.2 112 72.3
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 5.8e-21 105.5 185 33.0
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 1.1e-16 91.3 186 29.0


User provided reference genes

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