Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P510T18 Lonicera japonica HOM05D001925 ORTHO05D004257 3.1e-78 295.0 148 100.0
Lj6P578T28 Lonicera japonica HOM05D001925 ORTHO05D004257 3.4e-69 265.0 148 92.6
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 1.7e-68 262.7 148 92.6
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 3.3e-27 125.6 151 49.7
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 1.2e-26 123.6 148 50.7
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 2.1e-26 122.9 146 47.9
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 1.2e-24 117.1 151 47.7
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 1.5e-24 116.7 134 47.0
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 2.2e-23 112.8 146 45.9
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 2.4e-22 109.4 146 45.9
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 1.3e-20 103.6 145 43.4
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 2.3e-20 102.8 147 41.5
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 8.6e-20 100.9 155 43.2
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 8.6e-20 100.9 148 42.6
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 1.5e-19 100.1 150 45.3
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 3.3e-19 99.0 148 45.9
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 9.5e-19 97.4 145 39.3
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 1.2e-18 97.1 149 43.0
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 1.2e-18 97.1 148 40.5
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 2.1e-18 96.3 151 43.7
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 2.8e-18 95.9 144 43.8
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 6.2e-18 94.7 143 42.0
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 6.2e-18 94.7 153 43.1
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 5.2e-17 91.7 146 41.1
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 6.8e-17 91.3 146 37.7
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 6.8e-17 91.3 149 39.6
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 1.2e-16 90.5 146 37.7
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.5e-16 90.1 171 38.0
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 1.5e-16 90.1 146 37.0
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 4.4e-16 88.6 154 39.6
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 5.8e-16 88.2 146 36.3
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 5.8e-16 88.2 148 39.9
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 7.5e-16 87.8 146 40.4
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 1.7e-15 86.7 125 44.8
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 2.2e-15 86.3 154 40.9
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 2.9e-15 85.9 152 40.1
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 3.7e-15 85.5 147 39.5
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 4.9e-15 85.1 150 40.7
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 4.9e-15 85.1 148 40.5
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 6.4e-15 84.7 151 38.4
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 1.1e-14 84.0 125 44.0
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.4e-14 82.8 152 40.1
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 4.1e-14 82.0 152 40.8
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 4.1e-14 82.0 153 40.5
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 4.1e-14 82.0 125 42.4
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 5.4e-14 81.6 140 32.9
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 7.1e-14 81.3 150 38.7
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 1.2e-13 80.5 152 40.1
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 2.1e-13 79.7 121 38.8
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 2.7e-13 79.3 148 36.5
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 4.6e-13 78.6 150 36.0
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 4.6e-13 78.6 138 40.6
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 4.6e-13 78.6 148 36.5
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 1.0e-12 77.4 125 41.6
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 2.3e-12 76.3 146 37.7
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 8.6e-12 74.3 147 36.7
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 1.1e-11 73.9 151 35.1
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 1.5e-11 73.6 147 35.4
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 1.5e-11 73.6 149 34.9
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 2.5e-11 72.8 150 36.0
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.5e-11 72.8 148 35.8
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 3.3e-11 72.4 148 35.8
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.3e-11 72.4 148 35.8
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 3.3e-11 72.4 122 36.9
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 4.3e-11 72.0 148 35.8
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 7.3e-11 71.2 148 35.1
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 1.2e-10 70.5 130 33.1
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 1.6e-10 70.1 149 36.9
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.1e-10 69.7 148 35.1
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 2.8e-10 69.3 136 36.0
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 3.6e-10 68.9 155 36.8
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 6.2e-10 68.2 148 35.1
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.1e-09 67.4 148 34.5
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 2.4e-09 66.2 146 33.6
MSTRG.12873 Avicennia marina HOM05D001925 ORTHO05D004257 5.2e-09 65.1 105 40.0
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 1.2e-08 63.9 153 32.7
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 2.0e-08 63.2 123 33.3
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 3.4e-08 62.4 113 33.6
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 9.9e-08 60.8 150 30.7
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 4.9e-07 58.5 149 30.2
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 4.9e-07 58.5 147 34.7
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 8.4e-07 57.8 139 30.9
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 2.4e-06 56.2 149 31.5
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 4.2e-06 55.5 139 30.2
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 5.4e-06 55.1 149 32.2
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 7.1e-06 54.7 123 35.8
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 7.1e-06 54.7 148 32.4
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 9.2e-06 54.3 148 29.7


User provided reference genes

Program Settings