Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-68 261.5 121 100.0
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-52 207.6 120 79.2
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-52 207.6 121 77.7
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-52 206.8 120 78.3
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-50 201.4 120 75.8
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-49 199.9 120 75.8
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-46 188.7 111 78.4
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-45 184.9 120 69.2
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-38 161.4 121 60.3
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-37 159.8 121 57.9
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 8.3e-37 157.1 121 57.0
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 8.3e-37 157.1 121 57.0
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-36 156.8 121 56.2
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-36 156.4 121 58.7
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-36 154.5 121 56.2
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-35 153.3 120 59.2
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-35 152.5 120 58.3
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-35 152.5 120 58.3
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-35 152.1 120 58.3
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-35 151.8 120 58.3
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-35 151.4 121 57.9
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-35 151.0 120 58.3
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 7.8e-35 150.6 121 55.4
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.8e-35 150.6 120 57.5
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-34 149.8 121 57.0
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-34 149.8 121 55.4
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-34 148.7 120 56.7
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 8.6e-34 147.1 116 57.8
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-33 144.8 124 57.3
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-32 142.9 111 56.8
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-32 140.6 122 54.1
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-31 138.7 121 54.5
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-31 138.3 120 57.5
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-30 136.7 85 75.3
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-30 134.0 104 55.8
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-29 132.9 115 55.7
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-28 130.2 114 56.1
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-28 128.6 119 52.1
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 7.0e-28 127.5 114 56.1
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-27 126.7 119 55.5
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-26 123.2 114 50.9
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-26 121.3 120 47.5
Lju158C6T6 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-25 117.9 65 83.1
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-23 112.8 101 52.5
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-22 110.2 83 60.2
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-22 109.4 101 50.5
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-22 109.0 111 52.3
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-22 108.6 108 52.8
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 9.8e-22 107.1 113 47.8
Lj9C53T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-21 105.1 76 64.5
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-21 105.1 84 59.5
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-20 101.7 75 61.3
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 5.4e-20 101.3 114 43.0
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 7.0e-20 100.9 89 51.7
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-19 99.8 108 50.0
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 2.7e-19 99.0 111 42.3
Lj4A163G72 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-19 99.0 95 53.7
Lj7C368T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-19 98.6 76 60.5
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 6.0e-19 97.8 109 44.0
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 1.0e-18 97.1 111 42.3
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 3.0e-18 95.5 65 66.2
Lj4A52T44 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-16 89.7 75 53.3
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-16 89.7 71 57.7
Lj2C883T0 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-16 87.8 76 55.3
Lj7C349T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-16 87.8 76 55.3
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-15 86.7 45 82.2
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.4e-15 86.7 115 35.7
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-15 86.3 96 44.8
Lj4A452T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-15 86.3 77 50.6
Lj7A336T29 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-15 85.5 63 63.5
Lj4P686T45 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-15 84.3 85 45.9
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 9.8e-14 80.5 115 41.7
Lj1A171T29 Lonicera japonica HOM05D000176 ORTHO05D000106 9.8e-14 80.5 70 55.7
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 3.7e-13 78.6 120 37.5
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.4e-13 77.8 115 40.9
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.3e-13 77.4 70 47.1
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 1.4e-12 76.6 98 37.8
Lj1E569T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-12 76.6 70 47.1
Lj3A581T20 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-12 75.5 45 71.1
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.1e-12 75.1 115 40.9
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-12 74.7 70 45.7
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-11 73.6 65 56.9
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 1.2e-11 73.6 108 38.9
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 2.1e-11 72.8 108 38.0
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.7e-11 72.4 106 37.7
Lj4A456T44 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 71.6 39 79.5
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.8e-11 70.9 100 39.0
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.8e-11 70.9 100 40.0
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 7.8e-11 70.9 100 40.0
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.0e-10 70.5 115 40.9
Lj1C830T3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.6 68 42.6
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.6 65 50.8
Aqoxy1G03413 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 5.1e-10 68.2 117 34.2
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 8.6e-10 67.4 96 38.5
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-09 65.5 62 50.0
Lju170A10G17 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-09 65.1 60 50.0
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-09 64.7 48 60.4
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 7.3e-09 64.3 101 34.7
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 9.5e-09 63.9 112 32.1
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.2e-08 63.5 96 37.5
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-08 63.2 121 31.4
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-08 62.8 62 48.4
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-08 62.8 62 48.4
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 4.7e-08 61.6 86 38.4
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.7e-08 61.6 83 42.2
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-08 61.2 104 35.6
Lj4C483T6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-08 61.2 62 45.2
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 8.1e-08 60.8 104 34.6
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 8.1e-08 60.8 104 34.6
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.1e-07 60.5 90 34.4
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 1.4e-07 60.1 104 33.7
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 1.4e-07 60.1 111 29.7
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.1e-07 58.9 89 37.1
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 5.2e-07 58.2 104 33.7
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.8e-07 57.8 107 33.6
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 8.9e-07 57.4 99 36.4
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 8.9e-07 57.4 99 34.3
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.2e-06 57.0 100 33.0
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 2.0e-06 56.2 93 34.4
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.0e-06 56.2 106 33.0
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.0e-06 56.2 106 33.0
Aqoxy3G01281 Aquilegia oxysepala HOM05D025411 ORTHO05D000140 4.4e-06 55.1 95 35.8
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.4e-06 55.1 70 41.4
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-06 55.1 61 45.9
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.8e-06 54.7 70 41.4
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.8e-06 54.7 70 41.4
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.8e-06 54.7 70 41.4
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.8e-06 54.7 70 41.4
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.8e-06 54.7 70 41.4
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 7.6e-06 54.3 70 41.4
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 9.9e-06 53.9 100 32.0


User provided reference genes

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