Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P435T40 Lonicera japonica HOM05D001492 ORTHO05D001400 2.5e-78 295.4 157 100.0
Dinv41470 Davidia involucrata HOM05D001492 ORTHO05D001400 5.2e-23 111.7 187 44.4
Hma1.2p1_0497F.1_g166440 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 1.2e-19 100.5 174 44.8
CSS0040743 Camellia sinensis var. sinensis HOM05D001492 ORTHO05D001400 5.5e-17 91.7 177 43.5
TAR383G0276 Trochodendron aralioides HOM05D000291 ORTHO05D001400 7.2e-17 91.3 171 41.5
Actinidia21946 Actinidia chinensis HOM05D001492 ORTHO05D001400 3.6e-16 89.0 166 44.0
Duzib187G0848 Durio zibethinus HOM05D001492 ORTHO05D001400 8.9e-15 84.3 164 42.1
Nn2g12127 Nelumbo nucifera HOM05D001492 ORTHO05D001400 2.6e-14 82.8 172 41.9
Ciclev10008615m.g Citrus clementina HOM05D001492 ORTHO05D001400 4.4e-14 82.0 167 41.9
GSVIVG01015602001 Vitis vinifera HOM05D001492 ORTHO05D001400 4.4e-14 82.0 167 42.5
Rhsim01G0061000 Rhododendron simsii HOM05D001492 ORTHO05D001400 5.7e-14 81.6 169 39.6
Duzib168G0736 Durio zibethinus HOM05D001492 ORTHO05D001400 1.3e-13 80.5 165 41.2
Peaxi162Scf00088g00125 Petunia axillaris HOM05D001492 ORTHO05D001400 4.9e-13 78.6 172 38.4
CiPaw.04G175700 Carya illinoinensis HOM05D001492 ORTHO05D001400 1.4e-12 77.0 172 41.3
TAR625G0095 Trochodendron aralioides HOM05D001492 ORTHO05D001400 1.8e-12 76.6 171 38.6
COL.COLO4_35178 Corchorus olitorius HOM05D001492 ORTHO05D001400 2.4e-12 76.3 161 40.4
Atru.chr7.1954 Acer truncatum HOM05D001492 ORTHO05D001400 3.1e-12 75.9 164 40.9
Cc06_g08030 Coffea canephora HOM05D001492 ORTHO05D001400 4.1e-12 75.5 174 40.2
Thecc.09G133500 Theobroma cacao HOM05D001492 ORTHO05D001400 4.1e-12 75.5 164 39.0
Actinidia07322 Actinidia chinensis HOM05D001492 ORTHO05D001400 5.4e-12 75.1 177 37.9
Potri.018G125400 Populus trichocarpa HOM05D001492 ORTHO05D001400 5.4e-12 75.1 162 39.5
Potri.T125207 Populus trichocarpa HOM05D001492 ORTHO05D001400 5.4e-12 75.1 162 39.5
MBI14_g09865_MAGBIO Magnolia biondii HOM05D001492 ORTHO05D001400 1.2e-11 73.9 164 37.2
Prupe.7G249100 Prunus persica HOM05D001492 ORTHO05D001400 1.2e-11 73.9 170 37.1
Gohir.A06G053500 Gossypium hirsutum HOM05D001492 ORTHO05D001400 5.9e-11 71.6 165 37.6
Sabra18G0106700 Salix brachista HOM05D001492 ORTHO05D001400 5.9e-11 71.6 162 38.3
Potri.006G065200 Populus trichocarpa HOM05D001492 ORTHO05D001400 1.3e-10 70.5 161 41.0
Dinv36475 Davidia involucrata HOM05D001492 ORTHO05D001400 1.7e-10 70.1 117 45.3
Aqoxy7G03627 Aquilegia oxysepala HOM05D001492 ORTHO05D001400 3.8e-10 68.9 166 38.6
TAR636G0826 Trochodendron aralioides HOM05D001492 ORTHO05D001400 8.6e-10 67.8 172 38.4
Haze_25495 Corylus avellana HOM05D001492 ORTHO05D001400 1.5e-09 67.0 170 40.6
Manes.14G116228 Manihot esculenta HOM05D001492 ORTHO05D001400 1.5e-09 67.0 171 37.4
Cfa002925 Carpinus fangiana HOM05D001492 ORTHO05D001400 1.9e-09 66.6 175 41.1
SalBow6G0529 Salvia bowleyana HOM05D001492 ORTHO05D001400 3.3e-09 65.9 166 38.6
FvH4_1g02550 Fragaria vesca HOM05D001492 ORTHO05D001400 7.3e-09 64.7 112 42.9
FAN19G0605 Fragaria x ananassa HOM05D001492 ORTHO05D001400 7.3e-09 64.7 112 42.9
PSO017G5785 Papaver somniferum HOM05D001492 ORTHO05D001400 9.5e-09 64.3 197 33.5
AUR62013302 Chenopodium quinoa HOM05D001492 ORTHO05D001400 3.6e-08 62.4 115 41.7
FAN23G1722 Fragaria x ananassa HOM05D001492 ORTHO05D001400 3.6e-08 62.4 165 36.4
QL02p090023 Quercus lobata HOM05D001492 ORTHO05D001400 3.6e-08 62.4 172 36.0
arahy.Tifrunner.gnm1.ann1.HJD60P Arachis hypogaea HOM05D001492 ORTHO05D001400 4.7e-08 62.0 168 34.5
AUR62011181 Chenopodium quinoa HOM05D001492 ORTHO05D001400 4.7e-08 62.0 109 44.0
Nitab4.5_0003393g0010 Nicotiana tabacum HOM05D001492 ORTHO05D001400 8.0e-08 61.2 176 38.6
Sc18g0000300 Simmondsia chinensis HOM05D001492 ORTHO05D001400 8.0e-08 61.2 150 38.7
FAN26G0983 Fragaria x ananassa HOM05D001492 ORTHO05D001400 1.0e-07 60.8 165 35.8
PSO170G4027 Papaver somniferum HOM05D001492 ORTHO05D001400 1.0e-07 60.8 198 32.8
RcHm_v2.0_Chr2g0087581 Rosa chinensis HOM05D001492 ORTHO05D001400 1.8e-07 60.1 111 41.4
arahy.Tifrunner.gnm1.ann1.5RM0K9 Arachis hypogaea HOM05D001492 ORTHO05D001400 2.3e-07 59.7 168 33.9
Lalb_Chr13g0301541 Lupinus albus HOM05D001492 ORTHO05D001400 2.3e-07 59.7 167 36.5
Sabra06G0047600 Salix brachista HOM05D001492 ORTHO05D001400 2.3e-07 59.7 162 36.4
TWI32G1254 Tripterygium wilfordii HOM05D001492 ORTHO05D001400 2.3e-07 59.7 109 42.2
Ah.09g224670 Amaranthus hybridus HOM05D001492 ORTHO05D001400 6.8e-07 58.2 180 35.6
MD15G1165700 Malus domestica HOM05D001492 ORTHO05D001400 6.8e-07 58.2 169 30.8
Phvul.003G169300 Phaseolus vulgaris HOM05D001492 ORTHO05D001400 6.8e-07 58.2 171 33.9
MD02G1023000 Malus domestica HOM05D001492 ORTHO05D001400 1.2e-06 57.4 170 30.6
Hund26550 Selenicereus undatus HOM05D001492 ORTHO05D001400 1.2e-06 57.4 125 40.8
Glyma.13G160600 Glycine max HOM05D001492 ORTHO05D001400 3.4e-06 55.8 167 34.7
CANSAT11G1666 Cannabis sativa HOM05D001492 ORTHO05D001400 4.4e-06 55.5 167 35.9
Lsat_1_v5_gn_5_93880 Lactuca sativa HOM05D001492 ORTHO05D001400 4.4e-06 55.5 157 33.1
Nn8g39566 Nelumbo nucifera HOM05D001492 ORTHO05D001400 4.4e-06 55.5 159 37.1
Oeu056952.1 Olea europaea HOM05D001492 ORTHO05D001400 7.5e-06 54.7 158 36.1


User provided reference genes

Program Settings