Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 2.1e-80 302.4 156 100.0
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.4e-23 113.6 172 41.9
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.4e-23 113.6 172 41.9
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 6.5e-18 94.7 130 40.0
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 1.1e-17 94.0 148 39.2
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.1e-16 89.7 145 39.3
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 8.0e-16 87.8 164 37.2
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 8.0e-16 87.8 164 37.2
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 1.4e-15 87.0 137 36.5
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 1.4e-15 87.0 130 39.2
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.3e-15 86.3 165 38.8
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.3e-15 86.3 153 38.6
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.2e-15 85.1 160 38.1
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 6.7e-15 84.7 149 35.6
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 8.8e-15 84.3 154 37.7
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.5e-14 83.6 165 38.2
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 2.6e-14 82.8 132 37.1
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 4.4e-14 82.0 154 37.0
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 7.4e-14 81.3 111 38.7
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 1.7e-13 80.1 138 35.5
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 2.2e-13 79.7 134 35.8
Sopen04g006510 Solanum pennellii HOM05D008333 ORTHO05D010371 3.7e-13 79.0 129 35.7
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 6.3e-13 78.2 143 32.9
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 6.3e-13 78.2 143 32.9
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 6.3e-13 78.2 134 36.6
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 8.2e-13 77.8 135 36.3
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.8e-12 76.6 118 36.4
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 1.8e-12 76.6 128 31.2
Lsat_1_v5_gn_4_179800 Lactuca sativa HOM05D019919 ORTHO05D010371 2.4e-12 76.3 128 33.6
CSS0007512 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 4.1e-12 75.5 142 37.3
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 4.1e-12 75.5 118 35.6
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 4.1e-12 75.5 128 31.2
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 4.1e-12 75.5 128 31.2
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 5.3e-12 75.1 140 36.4
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 5.3e-12 75.1 116 37.1
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 5.3e-12 75.1 124 33.1
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 7.0e-12 74.7 128 35.9
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 1.6e-11 73.6 129 34.9
Lsat_1_v5_gn_4_179900 Lactuca sativa HOM05D019919 ORTHO05D010371 2.0e-11 73.2 109 33.0
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 2.0e-11 73.2 117 34.2
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 3.5e-11 72.4 122 34.4
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 5.9e-11 71.6 118 34.7
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 5.9e-11 71.6 98 40.8
Lsat_1_v5_gn_4_179820 Lactuca sativa HOM05D019919 ORTHO05D010371 5.0e-10 68.6 142 31.7
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.5e-09 66.2 136 33.1
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 5.5e-09 65.1 134 31.3
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 5.5e-09 65.1 136 32.4
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 5.5e-09 65.1 120 33.3
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 7.2e-09 64.7 128 34.4
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 7.2e-09 64.7 129 34.1
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.6e-08 63.5 115 34.8
HanXRQChr09g0265591 Helianthus annuus HOM05D019919 ORTHO05D010371 3.6e-08 62.4 97 35.1
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 4.7e-08 62.0 119 33.6
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 1.8e-07 60.1 139 27.3
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 4.4e-06 55.5 91 39.6
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 4.4e-06 55.5 117 33.3


User provided reference genes

Program Settings