Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 1.1e-53 213.0 107 100.0
Lj1P880T38 Lonicera japonica HOM05D008183 ORTHO05D007254 2.3e-30 135.6 105 60.0
Lj9P695T39 Lonicera japonica HOM05D008183 ORTHO05D007254 3.9e-30 134.8 89 74.2
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-22 109.8 105 48.6
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 1.4e-19 99.8 106 46.2
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 3.8e-17 91.7 106 41.5
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 3.8e-17 91.7 87 46.0
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 5.5e-16 87.8 95 46.3
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.6e-15 86.3 102 41.2
Lj5P293T5 Lonicera japonica HOM05D008183 ORTHO05D007254 6.0e-15 84.3 61 65.6
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 7.9e-15 84.0 96 43.8
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 2.1e-12 75.9 105 37.1
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 2.1e-12 75.9 86 43.0
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.2e-12 74.3 100 36.0
Lj5A712T32 Lonicera japonica HOM05D003297 ORTHO05D004027 6.2e-12 74.3 99 41.4
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 8.2e-12 73.9 68 48.5
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.2e-12 73.9 100 39.0
Lj1P1006T30 Lonicera japonica HOM05D008183 ORTHO05D007254 1.4e-11 73.2 90 40.0
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.4e-11 72.4 100 37.0
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 3.1e-11 72.0 103 38.8
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.0e-11 70.5 93 40.9
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 9.0e-11 70.5 78 43.6
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.0e-11 70.5 100 36.0
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.0e-11 70.5 100 36.0
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.4e-10 68.6 102 39.2
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.5e-10 68.2 100 36.0
Lj9P645T45 Lonicera japonica HOM05D008183 ORTHO05D007254 7.6e-10 67.4 75 49.3
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.4e-09 63.9 102 36.3
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.4e-08 63.2 102 38.2
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.2e-08 62.0 100 34.0
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-08 61.6 101 34.7
Lj3A1052T27 Lonicera japonica HOM05D008183 ORTHO05D007254 4.2e-08 61.6 62 50.0
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 7.1e-08 60.8 102 36.3
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.3e-08 60.5 100 34.0
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.3e-08 60.5 102 35.3
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 9.3e-08 60.5 86 34.9
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.2e-07 60.1 106 34.9
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.6e-07 59.7 102 35.3
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.6e-07 59.7 102 35.3
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.7e-07 58.9 102 30.4
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 3.5e-07 58.5 80 33.8
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 3.5e-07 58.5 100 32.0
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.0e-06 57.0 79 36.7
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.3e-06 56.6 102 32.4
Lj2P257T35 Lonicera japonica HOM05D008183 ORTHO05D007254 1.8e-06 56.2 60 41.7
Lj3P938T21 Lonicera japonica HOM05D008183 ORTHO05D007254 1.8e-06 56.2 57 50.9
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.0e-06 55.5 101 33.7
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.9e-06 55.1 89 33.7
Atru.chr1.1585 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-06 54.7 102 26.5
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.1e-06 54.7 77 37.7
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 6.7e-06 54.3 89 33.7
Dinv06602 Davidia involucrata HOM05D008183 ORTHO05D183152 6.7e-06 54.3 65 40.0
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 6.7e-06 54.3 77 37.7
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 6.7e-06 54.3 91 33.0


User provided reference genes

Program Settings