Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 2.5e-104 382.1 190 100.0
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 5.8e-69 264.6 186 75.8
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 3.7e-68 261.9 186 73.1
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 3.2e-67 258.8 187 72.2
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 6.2e-63 244.6 186 69.4
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 8.1e-63 244.2 187 68.4
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.4e-62 243.4 189 67.7
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 5.2e-62 241.5 188 69.7
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 4.4e-61 238.4 187 67.9
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 5.8e-61 238.0 187 66.8
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 9.9e-61 237.3 187 65.8
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 9.9e-61 237.3 187 67.4
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 2.2e-60 236.1 187 70.1
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 2.9e-60 235.7 187 65.2
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 2.9e-60 235.7 189 66.1
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 6.4e-60 234.6 187 66.3
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 6.4e-60 234.6 187 66.3
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 8.4e-60 234.2 187 67.4
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 1.1e-59 233.8 187 65.2
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 1.1e-59 233.8 187 68.4
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.9e-59 233.0 187 65.8
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 2.7e-58 229.2 189 64.6
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 3.5e-58 228.8 186 67.7
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 2.3e-57 226.1 186 66.7
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 3.0e-57 225.7 188 66.5
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 3.0e-57 225.7 187 64.2
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 3.9e-57 225.3 187 64.2
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 3.9e-57 225.3 189 63.5
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 8.7e-57 224.2 187 64.7
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 1.1e-56 223.8 187 64.2
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 2.5e-56 222.6 187 63.6
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 3.3e-56 222.2 186 64.5
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 3.3e-56 222.2 189 63.0
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 4.3e-56 221.9 188 64.4
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 4.3e-56 221.9 187 63.6
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 7.3e-56 221.1 186 65.6
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 3.6e-55 218.8 190 62.6
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 4.8e-55 218.4 187 63.6
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 4.8e-55 218.4 187 62.6
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 6.2e-55 218.0 189 62.4
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 1.4e-54 216.9 187 63.1
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 1.4e-54 216.9 187 62.0
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 3.1e-54 215.7 187 61.5
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 5.3e-54 214.9 190 63.7
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 9.0e-54 214.2 189 63.5
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 9.0e-54 214.2 187 63.6
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 1.2e-53 213.8 188 61.7
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 2.6e-53 212.6 187 62.0
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.6e-53 212.6 187 62.0
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 3.4e-53 212.2 194 63.9
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 4.4e-53 211.8 192 61.5
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 7.6e-53 211.1 188 59.0
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 7.6e-53 211.1 187 63.1
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 1.7e-52 209.9 188 61.2
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 2.9e-52 209.1 187 62.6
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 2.9e-52 209.1 188 60.1
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 3.8e-52 208.8 187 61.0
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 3.8e-52 208.8 193 61.1
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 4.9e-52 208.4 188 61.2
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 4.9e-52 208.4 188 60.6
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 6.4e-52 208.0 188 61.2
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 8.4e-52 207.6 187 60.4
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 8.4e-52 207.6 188 62.8
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.1e-51 207.2 187 61.0
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 1.9e-51 206.5 188 59.6
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.9e-51 206.5 186 60.8
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.9e-51 206.5 196 59.7
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 2.4e-51 206.1 187 60.4
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 5.4e-51 204.9 190 58.9
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 7.1e-51 204.5 188 60.1
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 1.6e-50 203.4 191 60.7
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 2.1e-50 203.0 188 60.1
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 2.7e-50 202.6 187 60.4
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 2.7e-50 202.6 192 60.9
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 4.6e-50 201.8 186 61.3
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 6.0e-50 201.4 188 59.6
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 1.0e-49 200.7 185 60.5
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.0e-49 200.7 188 59.6
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 2.3e-49 199.5 185 59.5
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 3.9e-49 198.7 194 59.3
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 5.1e-49 198.4 187 62.0
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 5.1e-49 198.4 187 59.9
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 6.6e-49 198.0 186 57.0
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 6.6e-49 198.0 192 60.4
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 1.1e-48 197.2 188 59.6
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 2.5e-48 196.1 188 59.0
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 3.3e-48 195.7 194 57.7
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 3.3e-48 195.7 201 57.2
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 2.1e-47 193.0 186 57.5
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 4.8e-47 191.8 194 59.8
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 8.1e-47 191.0 186 55.9
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 2.4e-46 189.5 190 55.8
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 2.4e-46 189.5 186 60.2
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 1.2e-45 187.2 190 57.4
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 1.5e-45 186.8 188 56.4
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 2.6e-45 186.0 188 56.4
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 7.6e-45 184.5 191 59.2
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 9.9e-45 184.1 187 55.1
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 1.2e-42 177.2 206 57.8
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 3.5e-42 175.6 200 51.5
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 1.0e-41 174.1 197 51.8
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 1.3e-41 173.7 185 57.3
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 2.3e-41 172.9 195 52.3
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 3.0e-41 172.6 187 53.5
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 3.9e-41 172.2 188 54.3
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.1e-40 170.6 203 51.7
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.1e-40 170.6 201 52.2
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 2.5e-40 169.5 195 52.8
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 7.4e-40 167.9 188 56.4
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 1.3e-39 167.2 222 47.3
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 2.1e-39 166.4 188 50.5
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 4.8e-39 165.2 187 51.9
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 6.2e-39 164.9 192 54.2
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 6.2e-39 164.9 152 58.6
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 6.2e-39 164.9 189 52.9
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.4e-38 163.7 187 52.9
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 2.4e-38 162.9 189 52.4
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 6.9e-38 161.4 187 51.3
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 6.9e-38 161.4 188 54.3
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 1.5e-37 160.2 187 51.9
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 1.3e-36 157.1 188 50.5
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 1.7e-36 156.8 192 53.1
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 1.1e-35 154.1 187 51.9
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 9.3e-35 151.0 194 49.5
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 1.8e-33 146.7 173 53.2
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 1.9e-32 143.3 195 48.7
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 3.3e-32 142.5 187 48.1
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 4.3e-32 142.1 190 50.5
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 4.3e-32 142.1 149 53.7
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 9.6e-32 141.0 187 50.8
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 4.8e-31 138.7 191 48.7
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 6.3e-31 138.3 152 55.3
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 8.2e-31 137.9 191 48.7
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 4.1e-30 135.6 191 45.5
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 6.9e-30 134.8 187 44.4
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 2.6e-29 132.9 188 50.0
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 3.4e-29 132.5 188 47.3
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 7.6e-29 131.3 189 46.0
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 1.0e-28 131.0 187 46.5
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.7e-28 130.2 192 46.4
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 1.7e-28 130.2 191 47.6
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 2.9e-28 129.4 93 73.1
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 6.5e-28 128.3 187 46.0
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 6.5e-28 128.3 187 46.0
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 1.1e-27 127.5 190 46.3
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 1.1e-27 127.5 190 46.3
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 1.9e-27 126.7 188 44.7
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 1.9e-27 126.7 188 46.8
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 5.5e-27 125.2 189 45.5
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 1.6e-26 123.6 187 42.8
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 1.6e-26 123.6 187 46.0
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 2.7e-26 122.9 204 43.1
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 3.5e-26 122.5 191 42.9
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 2.3e-25 119.8 187 44.9
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 6.7e-25 118.2 190 44.2
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 1.9e-24 116.7 213 42.3
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 2.2e-23 113.2 188 42.6
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 3.7e-23 112.5 187 43.9
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 3.7e-23 112.5 202 44.1
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 4.8e-23 112.1 188 43.1
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 3.2e-19 99.4 192 41.7
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 4.2e-19 99.0 198 36.9
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 9.4e-19 97.8 201 39.3
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 6.1e-18 95.1 193 40.9
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 1.8e-17 93.6 180 45.0
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 3.0e-17 92.8 149 45.0
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 3.3e-16 89.4 142 45.1
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 3.3e-16 89.4 151 43.7
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 9.7e-16 87.8 192 38.5
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 3.1e-14 82.8 144 41.7
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 1.2e-13 80.9 92 54.3
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 1.3e-12 77.4 154 40.3
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 8.8e-09 64.7 161 36.0
HPP92_002804 Vanilla planifolia HOM05D003947 ORTHO05D004614 1.3e-07 60.8 118 38.1


User provided reference genes

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