Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 4.3e-89 331.3 163 100.0
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 4.8e-88 327.8 163 98.8
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 2.6e-62 242.3 168 69.0
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.0e-61 240.4 163 69.9
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.8e-58 229.6 163 68.7
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 3.9e-58 228.4 163 63.8
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 5.1e-58 228.0 169 63.9
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 1.1e-57 226.9 169 66.3
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.2e-56 222.6 169 66.3
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 2.2e-56 222.6 163 64.4
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 6.3e-56 221.1 163 63.8
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 7.0e-55 217.6 167 64.1
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 9.1e-55 217.2 169 60.9
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 9.1e-55 217.2 169 65.1
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 2.6e-54 215.7 166 63.3
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 7.7e-54 214.2 169 60.9
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 7.7e-54 214.2 169 60.9
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 7.7e-54 214.2 169 61.5
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.0e-53 213.8 163 60.7
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.3e-53 213.4 163 59.5
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 2.2e-53 212.6 163 60.7
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.2e-53 212.6 169 59.8
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 3.8e-53 211.8 169 62.1
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 3.8e-53 211.8 169 62.1
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 5.0e-53 211.5 163 65.0
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 6.5e-53 211.1 163 62.6
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 6.5e-53 211.1 163 66.3
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 6.5e-53 211.1 170 63.5
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 8.5e-53 210.7 163 62.0
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 1.1e-52 210.3 163 58.9
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 1.1e-52 210.3 163 58.9
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 1.1e-52 210.3 163 58.3
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 1.5e-52 209.9 165 61.2
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 1.9e-52 209.5 163 59.5
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.5e-52 209.1 163 64.4
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 3.2e-52 208.8 169 59.2
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 4.2e-52 208.4 169 60.9
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 9.4e-52 207.2 163 64.4
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.2e-51 206.8 169 57.4
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.6e-51 206.5 169 60.9
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 2.1e-51 206.1 163 60.7
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 2.1e-51 206.1 169 63.3
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.7e-51 205.7 163 59.5
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 2.7e-51 205.7 169 60.4
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 2.7e-51 205.7 169 59.8
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 6.1e-51 204.5 163 62.0
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 8.0e-51 204.1 169 59.8
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 8.0e-51 204.1 169 59.8
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 8.0e-51 204.1 166 60.2
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 1.0e-50 203.8 163 58.9
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 1.4e-50 203.4 169 58.6
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 2.3e-50 202.6 156 62.8
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 3.9e-50 201.8 169 60.4
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 6.7e-50 201.1 166 60.2
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 8.8e-50 200.7 163 59.5
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 8.8e-50 200.7 163 57.1
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 2.6e-49 199.1 169 58.6
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 2.6e-49 199.1 169 60.9
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 4.4e-49 198.4 163 60.7
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 2.8e-48 195.7 166 59.0
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.7e-48 195.3 173 57.8
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 4.8e-48 194.9 168 59.5
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 1.1e-47 193.7 163 55.2
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 3.1e-47 192.2 163 57.7
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 3.1e-47 192.2 163 60.1
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 9.1e-47 190.7 169 55.6
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 1.2e-46 190.3 163 55.2
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.0e-46 189.5 165 55.2
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.3e-45 186.8 165 54.5
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.3e-45 186.8 165 55.2
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 2.9e-45 185.7 169 56.8
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 3.8e-45 185.3 180 52.8
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 8.5e-45 184.1 169 53.8
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 1.1e-44 183.7 163 58.9
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 3.2e-44 182.2 163 55.8
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 4.2e-44 181.8 163 56.4
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 5.5e-44 181.4 163 52.8
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.7e-43 179.1 163 54.6
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 1.4e-42 176.8 164 55.5
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.3e-42 176.0 163 54.6
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.3e-42 176.0 161 54.7
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 2.3e-42 176.0 165 55.2
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 4.0e-42 175.3 163 55.8
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 1.2e-41 173.7 164 54.9
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 1.2e-41 173.7 163 55.2
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 1.2e-41 173.7 163 50.3
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 2.0e-41 172.9 163 54.0
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 3.4e-41 172.2 161 52.8
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 3.4e-41 172.2 163 54.0
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 3.7e-40 168.7 163 52.8
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 8.3e-40 167.5 164 54.3
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 8.3e-40 167.5 164 54.3
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.4e-39 166.0 233 42.9
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 5.3e-39 164.9 164 53.0
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 7.0e-39 164.5 167 52.7
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 1.6e-38 163.3 165 47.3
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 2.0e-38 162.9 166 52.4
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 4.5e-38 161.8 169 50.3
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 7.7e-38 161.0 163 51.5
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 1.3e-37 160.2 167 49.7
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 2.9e-37 159.1 169 50.3
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.9e-36 156.4 163 47.9
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 7.2e-36 154.5 99 70.7
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.0e-34 148.7 287 35.2
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 8.8e-34 147.5 149 51.0
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 8.8e-34 147.5 287 35.2
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.4e-33 145.6 140 55.7
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 3.4e-33 145.6 138 54.3
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 3.7e-32 142.1 164 50.6
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 2.4e-31 139.4 141 50.4
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.0e-29 134.0 183 39.9
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 1.7e-29 133.3 137 54.0
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 9.5e-28 127.5 159 42.1
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 5.2e-26 121.7 162 35.8
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 4.4e-25 118.6 134 51.5
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 3.7e-24 115.5 142 45.1
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 8.3e-24 114.4 107 57.9
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 3.2e-23 112.5 157 40.8
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 2.3e-21 106.3 143 39.2
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 3.1e-18 95.9 105 44.8
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 4.0e-18 95.5 55 76.4
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 1.2e-17 94.0 159 35.2
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 7.8e-14 81.3 87 48.3


User provided reference genes

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