Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 5.5e-83 310.8 148 100.0
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 4.7e-58 228.0 139 79.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.0e-49 200.3 113 85.8
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.3e-39 166.8 112 70.5
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.7e-39 166.4 112 73.2
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 4.5e-37 158.3 112 67.9
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 2.3e-36 156.0 112 67.9
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.9e-36 155.6 111 64.9
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.8e-36 155.2 112 67.0
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 5.0e-36 154.8 111 66.7
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 6.6e-36 154.5 112 67.0
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 8.6e-36 154.1 111 67.6
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.1e-35 153.7 111 67.6
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.5e-35 153.3 113 65.5
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 2.5e-35 152.5 112 66.1
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.2e-34 150.2 114 64.9
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.6e-34 149.8 111 64.9
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.1e-34 149.4 110 66.4
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.8e-34 149.1 110 66.4
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 4.7e-34 148.3 112 65.2
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 4.7e-34 148.3 112 64.3
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 6.1e-34 147.9 113 63.7
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 8.0e-34 147.5 111 65.8
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.0e-33 147.1 110 65.5
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.4e-33 146.7 112 65.2
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.4e-33 146.7 113 62.8
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.8e-33 146.4 112 65.2
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.8e-33 146.4 110 65.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.8e-33 146.4 112 63.4
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 2.3e-33 146.0 112 63.4
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.3e-33 146.0 112 64.3
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.0e-33 145.2 113 63.7
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 5.2e-33 144.8 111 63.1
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 5.2e-33 144.8 112 63.4
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 6.8e-33 144.4 113 64.6
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 8.9e-33 144.1 112 63.4
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 8.9e-33 144.1 112 63.4
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.2e-32 143.7 112 62.5
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.5e-32 143.3 110 63.6
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.5e-32 143.3 112 60.7
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.0e-32 142.9 113 62.8
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 2.0e-32 142.9 112 62.5
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 4.4e-32 141.7 110 62.7
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 5.8e-32 141.4 113 61.9
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 7.5e-32 141.0 112 61.6
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 7.5e-32 141.0 119 60.5
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 7.5e-32 141.0 119 60.5
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 7.5e-32 141.0 122 58.2
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 7.5e-32 141.0 112 62.5
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.3e-31 140.2 112 60.7
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.3e-31 140.2 118 61.0
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.3e-31 140.2 110 61.8
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.7e-31 139.8 112 61.6
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 2.9e-31 139.0 112 58.0
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 4.9e-31 138.3 113 60.2
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.9e-31 138.3 112 60.7
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 6.4e-31 137.9 112 63.4
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 6.4e-31 137.9 112 61.6
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.1e-30 137.1 111 63.1
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.1e-30 137.1 110 59.1
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-30 137.1 112 60.7
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-30 137.1 110 59.1
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 1.4e-30 136.7 114 61.4
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.4e-30 136.7 117 55.6
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.4e-30 136.7 111 58.6
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.9e-30 136.3 112 60.7
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 2.4e-30 136.0 110 59.1
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 2.4e-30 136.0 110 59.1
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.4e-30 136.0 110 58.2
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.4e-30 136.0 112 58.0
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 3.2e-30 135.6 113 61.9
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 5.4e-30 134.8 112 58.9
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 5.4e-30 134.8 112 58.9
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 7.0e-30 134.4 114 59.6
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 9.2e-30 134.0 112 58.0
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.0e-29 132.9 114 58.8
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.7e-29 132.5 112 56.2
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 4.6e-29 131.7 110 60.0
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.5e-27 126.7 119 53.8
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.5e-27 125.9 113 57.5
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 4.3e-27 125.2 115 59.1
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 2.8e-26 122.5 115 56.5
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 4.7e-26 121.7 112 53.6
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 6.2e-26 121.3 111 54.1
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.3e-25 119.4 115 56.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 6.8e-25 117.9 115 54.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 6.8e-25 117.9 118 52.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 2.6e-24 115.9 117 52.1
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.6e-24 115.9 118 50.8
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.4e-24 115.5 111 53.2
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 4.4e-24 115.2 118 51.7
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 7.5e-24 114.4 116 53.4
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 9.8e-24 114.0 115 53.0
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 1.3e-23 113.6 118 50.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.9e-23 112.5 114 54.4
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 2.9e-23 112.5 118 51.7
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 2.9e-23 112.5 118 51.7
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 2.9e-23 112.5 118 51.7
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.4e-22 110.2 112 48.2
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 4.1e-22 108.6 117 49.6
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 9.2e-22 107.5 118 48.3
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.6e-21 106.7 117 47.9
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 2.1e-21 106.3 117 48.7
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.3e-20 102.8 111 45.9
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.3e-19 98.6 111 45.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.2e-15 86.3 89 52.8
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.9e-14 83.2 76 55.3
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 7.1e-14 81.3 115 43.5
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 6.0e-13 78.2 152 38.2
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.8e-09 64.7 102 38.2
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.5e-08 63.5 99 44.4
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.3e-07 60.5 103 41.7
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 5.4e-06 55.1 118 35.6


User provided reference genes

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