Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P240T22 Lonicera japonica HOM05D008470 ORTHO05D010644 1.6e-93 347.1 345 100.0
Lj7P234T13 Lonicera japonica HOM05D008470 ORTHO05D010644 1.2e-85 320.9 341 97.1
Haze_18132 Corylus avellana HOM05D008470 ORTHO05D010644 2.4e-28 130.6 400 62.2
Ciclev10007870m.g Citrus clementina HOM05D008470 ORTHO05D010644 6.9e-28 129.0 405 62.2
Nn8g38729 Nelumbo nucifera HOM05D008470 ORTHO05D010644 5.8e-27 125.9 399 62.7
Duzib187G1003 Durio zibethinus HOM05D008470 ORTHO05D010644 2.9e-26 123.6 111 54.1
RcHm_v2.0_Chr6g0311521 Rosa chinensis HOM05D008470 ORTHO05D010644 6.4e-26 122.5 400 61.2
Dinv05110 Davidia involucrata HOM05D008470 ORTHO05D010644 1.9e-25 120.9 371 66.0
Thecc.09G060200 Theobroma cacao HOM05D008470 ORTHO05D010644 1.9e-25 120.9 111 50.5
Potri.006G223300 Populus trichocarpa HOM05D008470 ORTHO05D010644 7.1e-25 119.0 397 58.4
Cc08_g01370 Coffea canephora HOM05D008470 ORTHO05D010644 4.6e-24 116.3 400 61.2
FvH4_6g18940 Fragaria vesca HOM05D008470 ORTHO05D010644 3.0e-23 113.6 118 44.9
Gohir.D07G020400 Gossypium hirsutum HOM05D008470 ORTHO05D010644 3.9e-23 113.2 111 49.5
Gorai.001G021200 Gossypium raimondii HOM05D008470 ORTHO05D010644 3.9e-23 113.2 111 49.5
Duzib168G2087 Durio zibethinus HOM05D008470 ORTHO05D010644 1.1e-22 111.7 111 49.5
Lj7P240T28 Lonicera japonica HOM05D008470 ORTHO05D010644 1.1e-22 111.7 75 74.7
Atru.chr7.1873 Acer truncatum HOM05D008470 ORTHO05D010644 1.9e-22 110.9 117 47.0
Lj7P235T14 Lonicera japonica HOM05D008470 ORTHO05D010644 1.9e-22 110.9 77 74.0
MD08G1069300 Malus domestica HOM05D008470 ORTHO05D010644 4.3e-22 109.8 404 60.1
TAR636G2211 Trochodendron aralioides HOM05D008470 ORTHO05D010644 4.8e-21 106.3 67 73.1
arahy.Tifrunner.gnm1.ann1.JJ1EFU Arachis hypogaea HOM05D008470 ORTHO05D010644 1.8e-20 104.4 398 59.3
Phvul.009G080600 Phaseolus vulgaris HOM05D008470 ORTHO05D010644 3.1e-20 103.6 91 53.8
Prupe.1G406700 Prunus persica HOM05D008470 ORTHO05D010644 3.1e-20 103.6 116 42.2
Aqoxy1G00269 Aquilegia oxysepala HOM05D008470 ORTHO05D010644 5.3e-20 102.8 66 66.7
Glyma.04G054900 Glycine max HOM05D008470 ORTHO05D010644 9.0e-20 102.1 384 60.9
Oeu047081.1 Olea europaea HOM05D008470 ORTHO05D010644 9.0e-20 102.1 404 55.9
COL.COLO4_03754 Corchorus olitorius HOM05D008470 ORTHO05D010644 3.4e-19 100.1 118 42.4
arahy.Tifrunner.gnm1.ann1.5BA5FJ Arachis hypogaea HOM05D008470 ORTHO05D010644 5.8e-19 99.4 74 63.5
VMungo1309G2203 Vigna mungo HOM05D008470 ORTHO05D010644 7.6e-19 99.0 89 49.4
Sabra06G0172500 Salix brachista HOM05D008470 ORTHO05D010644 1.0e-18 98.6 384 57.6
FvH4_6g18941 Fragaria vesca HOM05D008470 ORTHO05D010644 1.3e-18 98.2 66 69.7
MD08G1069200 Malus domestica HOM05D008470 ORTHO05D010644 3.8e-18 96.7 114 40.4
Manes.03G052100 Manihot esculenta HOM05D008470 ORTHO05D010644 5.5e-17 92.8 74 58.1
Gohir.A07G020700 Gossypium hirsutum HOM05D008470 ORTHO05D010644 9.3e-17 92.0 87 52.9
Lj1g0027273 Lotus japonicus HOM05D008470 ORTHO05D010644 9.3e-17 92.0 83 53.0
AUR62009098 Chenopodium quinoa HOM05D008470 ORTHO05D010644 1.2e-16 91.7 74 56.8
HanXRQChr06g0182651 Helianthus annuus HOM05D008470 ORTHO05D010644 1.2e-16 91.7 355 65.1
AUR62020574 Chenopodium quinoa HOM05D008470 ORTHO05D010644 2.7e-16 90.5 75 54.7
MD15G1052800 Malus domestica HOM05D008470 ORTHO05D010644 3.5e-16 90.1 67 61.2
SalBow4G1486 Salvia bowleyana HOM05D008470 ORTHO05D010644 3.9e-15 86.7 71 62.0
Lsat_1_v5_gn_8_99341 Lactuca sativa HOM05D008470 ORTHO05D010644 3.3e-14 83.6 65 63.1
arahy.Tifrunner.gnm1.ann1.HIT9VK Arachis hypogaea HOM05D008470 ORTHO05D010644 4.3e-14 83.2 74 55.4
Migut.A00093 Erythranthe guttata HOM05D008470 ORTHO05D010644 5.7e-14 82.8 67 61.2
SGA_v2.0_scaffold20G09181 Striga asiatica HOM05D008470 ORTHO05D010644 8.2e-13 79.0 108 37.0
ATR0598G005 Amborella trichopoda HOM05D008470 ORTHO05D010644 1.4e-12 78.2 102 41.2
CDE04G2722 Ceratophyllum demersum HOM05D008470 ORTHO05D010644 4.5e-11 73.2 62 51.6
Ah.10g034010 Amaranthus hybridus HOM05D008470 ORTHO05D010644 1.0e-10 72.0 119 34.5
arahy.Tifrunner.gnm1.ann1.AWVJ5J Arachis hypogaea HOM05D008470 ORTHO05D010644 8.5e-10 68.9 58 55.2
Potri.018G050100 Populus trichocarpa HOM05D002542 ORTHO05D010145 1.9e-09 67.8 70 47.1
Migut.F00914 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.1e-08 64.3 71 39.4
Sabra04G0017000 Salix brachista HOM05D000891 ORTHO05D000761 3.6e-08 63.5 74 39.2
Gohir.A06G121700 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.4e-07 61.6 74 36.5
Potri.004G030000 Populus trichocarpa HOM05D000891 ORTHO05D000761 1.4e-07 61.6 75 37.3
THA.LOC109115989 Tarenaya hassleriana HOM05D008470 ORTHO05D010644 2.3e-07 60.8 43 60.5
AUR62012561 Chenopodium quinoa HOM05D000891 ORTHO05D000761 3.9e-07 60.1 75 37.3
Peaxi162Scf00931g00051 Petunia axillaris HOM05D000891 ORTHO05D000761 5.1e-07 59.7 72 34.7
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 6.7e-07 59.3 77 33.8
CiPaw.10G113500 Carya illinoinensis HOM05D000891 ORTHO05D000761 1.1e-06 58.5 68 39.7
Potri.011G108500 Populus trichocarpa HOM05D002453 ORTHO05D008746 1.1e-06 58.5 75 41.3
ECA240G3581 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-06 57.4 59 42.4
Nitab4.5_0000425g0250 Nicotiana tabacum HOM05D000891 ORTHO05D000761 2.5e-06 57.4 73 34.2
FAN05G3290 Fragaria x ananassa HOM05D006819 ORTHO05D008763 3.3e-06 57.0 75 34.7
QL05p077802 Quercus lobata HOM05D000891 ORTHO05D000761 3.3e-06 57.0 68 38.2
Gohir.D06G125900 Gossypium hirsutum HOM05D000891 ORTHO05D000761 4.3e-06 56.6 68 38.2
Eucgr.D00875 Eucalyptus grandis HOM05D000891 ORTHO05D000761 5.7e-06 56.2 73 37.0
PGSC0003DMG400014245 Solanum tuberosum HOM05D005764 ORTHO05D006600 5.7e-06 56.2 72 36.1
Gorai.010G146600 Gossypium raimondii HOM05D000891 ORTHO05D000761 7.4e-06 55.8 65 40.0
Nitab4.5_0003045g0010 Nicotiana tabacum HOM05D000891 ORTHO05D000761 7.4e-06 55.8 72 33.3
Phvul.009G206300 Phaseolus vulgaris HOM05D000104 ORTHO05D009920 7.4e-06 55.8 67 31.3
CiPaw.12G046300 Carya illinoinensis HOM05D007085 ORTHO05D008828 9.7e-06 55.5 70 38.6
Haze_02747 Corylus avellana HOM05D000104 ORTHO05D009920 9.7e-06 55.5 67 34.3
Thecc.06G206400 Theobroma cacao HOM05D000891 ORTHO05D000761 9.7e-06 55.5 65 38.5


User provided reference genes

Program Settings