Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 8.8e-188 660.2 352 100.0
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 1.1e-84 317.8 313 60.7
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 5.1e-79 298.9 317 57.7
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 2.8e-77 293.1 343 53.6
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 3.1e-76 289.7 324 54.6
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 2.6e-75 286.6 312 54.5
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 4.2e-73 279.3 322 54.0
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 2.0e-70 270.4 317 55.8
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 3.3e-70 269.6 329 51.7
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 1.7e-69 267.3 327 52.6
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 2.8e-69 266.5 324 51.5
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 4.8e-69 265.8 315 53.0
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 6.3e-69 265.4 325 51.4
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 8.2e-69 265.0 329 51.7
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 2.4e-68 263.5 331 52.9
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 4.1e-68 262.7 331 51.7
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 1.2e-67 261.2 311 52.7
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 3.4e-67 259.6 333 49.8
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 4.5e-67 259.2 322 52.2
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 4.5e-67 259.2 334 50.0
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 5.0e-66 255.8 324 51.9
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.1e-65 254.6 334 49.4
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 7.2e-65 251.9 324 50.9
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.6e-64 250.8 337 48.7
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 1.6e-64 250.8 336 49.4
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.6e-64 249.6 313 50.8
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 7.9e-64 248.4 306 52.9
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.4e-63 247.7 339 48.1
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 2.3e-63 246.9 323 51.7
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 3.0e-63 246.5 304 53.0
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 3.9e-63 246.1 324 49.7
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 5.1e-63 245.7 335 49.0
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.6e-62 243.4 321 51.4
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.3e-62 243.0 312 51.0
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 2.2e-61 240.4 319 50.8
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 1.8e-60 237.3 317 50.2
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.4e-60 236.9 313 49.5
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 7.0e-60 235.3 323 50.2
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 2.6e-59 233.4 328 48.8
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 4.5e-59 232.6 314 49.4
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 4.5e-59 232.6 306 48.4
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 2.9e-58 229.9 324 47.5
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 3.8e-58 229.6 325 46.8
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 6.5e-58 228.8 371 42.3
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 6.5e-58 228.8 309 49.8
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 4.2e-57 226.1 306 49.7
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 9.4e-57 224.9 307 49.5
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 2.1e-56 223.8 311 46.0
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.0e-55 221.5 293 49.5
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.4e-55 221.1 302 49.0
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 5.2e-55 219.2 307 48.2
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 1.3e-53 214.5 318 47.8
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.7e-53 214.2 332 47.3
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 2.4e-52 210.3 304 44.1
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 3.5e-51 206.5 317 44.5
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.3e-50 204.5 317 43.8
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 2.2e-50 203.8 322 45.0
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 2.5e-49 200.3 322 44.4
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 3.2e-49 199.9 351 43.9
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 4.7e-48 196.1 333 43.2
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 8.0e-48 195.3 279 47.0
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 1.2e-46 191.4 326 44.8
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 2.6e-46 190.3 302 39.7
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 7.5e-46 188.7 322 41.9
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 1.7e-45 187.6 317 42.3
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 6.3e-45 185.7 312 41.3
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 1.1e-44 184.9 295 45.1
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 4.1e-44 183.0 340 42.1
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 1.6e-43 181.0 301 41.9
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 5.9e-43 179.1 290 42.1
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 5.9e-43 179.1 338 39.6
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 2.9e-42 176.8 307 42.7
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 3.8e-42 176.4 302 42.1
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 3.6e-40 169.9 291 42.6
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 6.1e-40 169.1 342 40.9
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 8.0e-40 168.7 349 39.0
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.8e-39 167.5 318 40.9
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.8e-39 167.5 170 54.7
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 5.2e-39 166.0 307 40.1
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 6.8e-39 165.6 301 39.5
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.7e-37 161.0 300 42.7
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 3.7e-37 159.8 320 37.2
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.2e-35 154.8 304 38.8
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.6e-35 154.5 262 43.9
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 2.3e-34 150.6 309 38.2
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 2.5e-33 147.1 301 37.2
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 7.3e-33 145.6 188 47.9
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 9.5e-33 145.2 280 39.3
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.0e-31 140.2 295 35.9
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.0e-31 140.2 307 37.8
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 4.4e-30 136.3 297 34.7
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 5.7e-30 136.0 280 36.8
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 5.7e-30 136.0 303 36.6
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 4.9e-29 132.9 283 36.4
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 8.3e-29 132.1 272 38.6
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 3.2e-28 130.2 345 33.3
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.3e-26 124.0 364 30.8
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.1e-25 121.7 286 33.2
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 1.0e-23 115.2 88 62.5
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 2.9e-21 107.1 294 31.3
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 4.1e-20 103.2 109 56.0
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 1.2e-19 101.7 313 31.6
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 1.2e-19 101.7 303 30.0
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 7.8e-19 99.0 314 31.2
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.3e-18 98.2 239 35.1
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 3.0e-18 97.1 90 54.4
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 3.0e-18 97.1 402 26.4
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 3.3e-17 93.6 305 33.1
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 4.3e-17 93.2 319 31.7
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 4.3e-17 93.2 285 31.9
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 4.3e-17 93.2 285 31.9
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 5.6e-17 92.8 285 32.3
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 5.6e-17 92.8 285 32.3
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 7.3e-17 92.4 301 28.6
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 3.1e-15 87.0 166 40.4
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 5.2e-15 86.3 301 27.9
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 8.9e-15 85.5 301 27.9
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 8.9e-15 85.5 301 27.9
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 8.9e-15 85.5 147 44.9
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 1.2e-14 85.1 280 31.1
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 2.0e-14 84.3 326 27.6
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 2.0e-14 84.3 325 33.2
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 3.4e-14 83.6 308 30.2
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 3.4e-14 83.6 306 31.0
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 4.4e-14 83.2 304 30.6
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 4.4e-14 83.2 304 30.6
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 5.8e-14 82.8 308 30.2
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 7.5e-14 82.4 364 28.6
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 9.8e-14 82.0 284 32.0
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 2.2e-13 80.9 304 30.3
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 3.7e-13 80.1 320 31.9
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 8.3e-13 79.0 307 29.3
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 8.3e-13 79.0 320 32.8
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 1.1e-12 78.6 280 30.0
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.1e-12 78.6 304 29.6
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 5.4e-12 76.3 284 28.2
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 7.1e-12 75.9 150 42.7
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 7.1e-12 75.9 149 40.9
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 2.7e-11 73.9 38 97.4
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 2.7e-11 73.9 56 75.0
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 4.6e-11 73.2 287 31.4
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 6.0e-11 72.8 291 29.9
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.3e-10 71.6 39 94.9
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.3e-10 71.6 39 94.9
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 4.7e-08 63.2 73 43.8


User provided reference genes

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