Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 1.1e-75 286.6 143 100.0
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 6.8e-38 161.0 149 55.7
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.6e-37 159.1 148 55.4
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 9.8e-37 157.1 125 61.6
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 2.4e-35 152.5 104 69.2
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.0e-33 147.1 136 57.4
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 1.1e-32 143.7 131 54.2
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.1e-32 143.7 132 51.5
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.5e-32 143.3 131 54.2
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 2.5e-32 142.5 137 50.4
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.3e-32 141.7 143 53.8
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.2e-31 140.2 122 56.6
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.1e-31 139.4 122 56.6
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 2.8e-31 139.0 121 57.9
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.0e-30 137.1 122 55.7
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 1.8e-30 136.3 119 59.7
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 5.2e-30 134.8 122 54.9
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 8.9e-30 134.0 143 50.3
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 1.2e-29 133.7 122 58.2
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 1.5e-29 133.3 130 52.3
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 2.6e-29 132.5 137 50.4
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 3.4e-29 132.1 130 53.1
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 5.8e-29 131.3 137 55.5
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 7.5e-29 131.0 137 54.0
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 1.7e-28 129.8 122 52.5
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 3.7e-28 128.6 137 54.7
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 3.7e-28 128.6 127 53.5
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 6.4e-28 127.9 145 47.6
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 6.4e-28 127.9 124 54.0
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 1.1e-27 127.1 102 57.8
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.1e-27 127.1 137 53.3
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 2.4e-27 125.9 129 52.7
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.4e-27 125.9 130 55.4
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 5.4e-27 124.8 137 52.6
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 9.2e-27 124.0 131 51.9
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.7e-26 122.5 107 56.1
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 4.6e-26 121.7 126 53.2
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.7e-25 119.8 144 45.1
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.7e-25 119.8 135 51.9
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 3.0e-25 119.0 118 55.9
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 5.0e-25 118.2 123 48.0
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 6.6e-25 117.9 106 57.5
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 8.6e-25 117.5 135 50.4
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.9e-24 116.3 106 52.8
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.9e-24 116.3 106 52.8
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 2.5e-24 115.9 121 49.6
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 3.3e-24 115.5 129 47.3
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.3e-24 115.5 106 56.6
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 3.3e-24 115.5 106 56.6
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 3.3e-24 115.5 131 48.1
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 4.3e-24 115.2 124 50.0
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.3e-24 115.2 106 56.6
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 5.6e-24 114.8 131 51.1
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 7.3e-24 114.4 121 50.4
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.5e-24 114.0 107 55.1
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 2.8e-23 112.5 124 47.6
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.8e-23 112.5 106 54.7
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.6e-23 112.1 106 53.8
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 4.7e-23 111.7 123 45.5
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.8e-22 107.8 105 51.4
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 8.9e-22 107.5 127 46.5
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 1.5e-21 106.7 114 49.1
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 2.0e-21 106.3 129 41.9
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.0e-21 106.3 79 62.0
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 2.9e-20 102.4 123 50.4
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.4e-19 100.1 105 49.5
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 7.0e-19 97.8 126 44.4
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 2.7e-18 95.9 128 39.8
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.3e-17 93.6 105 46.7
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.7e-17 93.2 125 42.4
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 8.6e-17 90.9 108 44.4
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.1e-16 90.5 108 45.4
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 1.1e-16 90.5 108 45.4
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 2.1e-15 86.3 111 47.7
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 5.2e-14 81.6 84 50.0
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 3.4e-13 79.0 94 40.4
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.4e-11 73.6 104 39.4
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.7e-09 66.6 128 36.7
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.1e-08 63.9 93 41.9
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.1e-08 63.9 68 51.5


User provided reference genes

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