Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P101T8 Lonicera japonica HOM05D000003 ORTHO05D000006 9.2e-50 199.9 100 100.0
CSS0042649 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-15 86.7 92 47.8
CSS0046951 Camellia sinensis var. sinensis HOM05D000284 ORTHO05D000805 5.8e-12 74.3 92 43.5
Rhsim08G0149800 Rhododendron simsii HOM05D000001 ORTHO05D008374 2.2e-11 72.4 84 44.0
CSS0008337 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.5e-11 70.9 83 41.0
vmacro11287 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 6.5e-11 70.9 82 42.7
vmacro17134 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 3.5e-09 65.1 75 41.3
CSS0037685 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.7e-08 60.8 50 50.0
CSS0014046 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 8.7e-08 60.5 50 50.0
CSS0036111 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 8.7e-08 60.5 50 50.0
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 59.3 99 33.3
TAR346G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.9e-07 59.3 90 33.3
Actinidia10466 Actinidia chinensis HOM05D000003 ORTHO05D000006 3.3e-07 58.5 99 34.3
CSS0003391 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.3e-07 58.5 50 48.0
Cpa.g.sc263.17 Carica papaya HOM05D000003 ORTHO05D000006 3.3e-07 58.5 97 33.0
PSO210G5611 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-07 58.5 85 34.1
TAR405G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000006 3.3e-07 58.5 87 36.8
PSO017G1257 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.2 91 34.1
CSS0037998 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 5.7e-07 57.8 76 38.2
CSS0040821 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 5.7e-07 57.8 50 48.0
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 5.7e-07 57.8 87 35.6
CSS0033838 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 9.6e-07 57.0 44 52.3
PGR102G1324 Punica granatum HOM05D000003 ORTHO05D000006 1.6e-06 56.2 90 37.8
QL11p029467 Quercus lobata HOM05D000003 ORTHO05D000006 1.6e-06 56.2 54 48.1
TWI23G1168 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-06 56.2 86 32.6
CSS0015694 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-06 55.8 97 33.0
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 2.1e-06 55.8 89 38.2
COL.COLO4_24806 Corchorus olitorius HOM05D000003 ORTHO05D000006 2.8e-06 55.5 93 34.4
Aqoxy1G03380 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.8e-06 54.7 102 31.4
PSO478G4982 Papaver somniferum HOM05D000003 ORTHO05D000006 4.8e-06 54.7 91 31.9
AUR62029848 Chenopodium quinoa HOM05D000003 ORTHO05D000006 6.2e-06 54.3 99 33.3
TPR.G11139 Trifolium pratense HOM05D000003 ORTHO05D000007 6.2e-06 54.3 86 33.7
CSS0021766 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.2e-06 53.9 43 51.2
CSS0042775 Camellia sinensis var. sinensis HOM05D000024 ORTHO05D000006 8.2e-06 53.9 50 46.0
QL01p004841 Quercus lobata HOM05D000003 ORTHO05D000006 8.2e-06 53.9 99 33.3
SGA_v2.0_scaffold255G45341 Striga asiatica HOM05D000003 ORTHO05D000006 8.2e-06 53.9 90 34.4
TAR682G0005 Trochodendron aralioides HOM05D000003 ORTHO05D000006 8.2e-06 53.9 86 34.9


User provided reference genes

Program Settings