Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.6e-40 169.1 91 100.0
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.2e-32 142.9 91 82.4
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.1e-32 142.1 90 82.2
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.1e-32 142.1 90 82.2
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.3e-31 139.4 91 81.3
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.8e-31 139.0 90 80.0
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 6.7e-31 137.1 91 80.2
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.9e-30 135.6 89 80.9
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.3e-30 134.8 91 80.2
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 4.3e-30 134.4 86 84.9
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 5.6e-30 134.0 91 78.0
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 5.6e-30 134.0 91 78.0
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 7.4e-30 133.7 85 85.9
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 7.4e-30 133.7 91 80.2
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 7.4e-30 133.7 93 79.6
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 1.3e-29 132.9 86 83.7
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.3e-29 132.9 87 82.8
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.3e-29 132.9 91 80.2
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.3e-29 132.9 91 79.1
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.6e-29 132.5 91 78.0
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.6e-29 132.5 91 78.0
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 2.1e-29 132.1 86 84.9
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 2.1e-29 132.1 86 83.7
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 2.1e-29 132.1 85 84.7
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 2.1e-29 132.1 85 84.7
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 2.1e-29 132.1 86 83.7
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.7e-29 131.3 86 83.7
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 4.8e-29 131.0 86 82.6
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 6.2e-29 130.6 86 81.4
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 6.2e-29 130.6 85 82.4
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 6.2e-29 130.6 86 84.9
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 8.2e-29 130.2 86 81.4
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 8.2e-29 130.2 86 81.4
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.1e-28 129.8 86 82.6
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.4e-28 129.4 86 81.4
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.4e-28 129.4 86 81.4
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 2.4e-28 128.6 86 81.4
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 3.1e-28 128.3 86 80.2
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 3.1e-28 128.3 86 81.4
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 3.1e-28 128.3 86 82.6
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 3.1e-28 128.3 86 80.2
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 4.0e-28 127.9 86 82.6
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 4.0e-28 127.9 86 82.6
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 4.0e-28 127.9 86 81.4
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 5.3e-28 127.5 86 80.2
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 5.3e-28 127.5 86 82.6
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 5.3e-28 127.5 86 82.6
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 6.9e-28 127.1 86 80.2
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 6.9e-28 127.1 86 80.2
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 6.9e-28 127.1 86 81.4
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 9.0e-28 126.7 85 82.4
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.2e-27 126.3 86 79.1
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.2e-27 126.3 86 80.2
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.5e-27 125.9 84 77.4
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.5e-27 125.9 86 81.4
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 1.5e-27 125.9 86 77.9
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.5e-27 125.9 86 79.1
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.5e-27 125.9 86 79.1
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 2.0e-27 125.6 86 77.9
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 2.0e-27 125.6 86 77.9
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 2.0e-27 125.6 86 77.9
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 2.0e-27 125.6 86 77.9
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 2.0e-27 125.6 86 77.9
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 2.0e-27 125.6 79 83.5
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 2.6e-27 125.2 85 76.5
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 2.6e-27 125.2 86 82.6
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 3.4e-27 124.8 86 80.2
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 3.4e-27 124.8 86 80.2
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 3.4e-27 124.8 86 76.7
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 3.4e-27 124.8 86 76.7
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 5.8e-27 124.0 86 81.4
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 5.8e-27 124.0 86 77.9
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 5.8e-27 124.0 86 77.9
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 5.8e-27 124.0 91 70.3
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 7.6e-27 123.6 91 71.4
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 7.6e-27 123.6 86 77.9
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 7.6e-27 123.6 91 71.4
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 7.6e-27 123.6 87 74.7
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.0e-26 123.2 86 77.9
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.3e-26 122.9 90 67.8
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.3e-26 122.9 86 80.2
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 3.8e-26 121.3 86 77.9
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 6.5e-26 120.6 83 77.1
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 8.4e-26 120.2 81 79.0
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 8.4e-26 120.2 86 76.7
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 8.4e-26 120.2 86 76.7
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 8.4e-26 120.2 86 76.7
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 8.4e-26 120.2 86 76.7
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 1.1e-25 119.8 96 69.8
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.4e-25 119.4 86 77.9
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.4e-25 119.4 86 77.9
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.4e-25 119.4 86 76.7
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 1.4e-25 119.4 81 77.8
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.4e-25 119.4 86 76.7
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.4e-25 119.4 91 68.1
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.9e-25 119.0 86 75.6
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.5e-25 118.6 86 75.6
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 3.2e-25 118.2 85 74.1
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 7.1e-25 117.1 85 69.4
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 7.1e-25 117.1 86 75.6
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 9.3e-25 116.7 86 74.4
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.2e-24 116.3 95 66.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.2e-24 116.3 93 69.9
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.2e-24 116.3 93 69.9
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 3.0e-23 111.7 91 68.1
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 5.1e-23 110.9 65 92.3
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 8.7e-23 110.2 83 71.1
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.7e-22 107.5 82 69.5
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 6.9e-20 100.5 91 60.4
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 6.9e-20 100.5 87 66.7
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 6.9e-20 100.5 87 64.4
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.3e-18 96.3 96 62.5
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-18 95.5 91 58.2
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 2.7e-16 88.6 86 54.7
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 9.7e-14 80.1 85 50.6
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 9.1e-12 73.6 79 54.4
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 2.9e-10 68.6 49 71.4


User provided reference genes

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