Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 5.1e-54 214.2 108 100.0
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 9.0e-43 176.8 112 83.9
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 1.2e-42 176.4 112 83.9
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.3e-37 158.3 112 74.1
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 1.4e-30 136.3 104 70.2
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 8.0e-15 84.0 123 43.9
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 1.1e-11 73.6 127 40.2
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 1.8e-11 72.8 118 41.5
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 2.4e-11 72.4 126 39.7
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 2.6e-10 68.9 116 38.8
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 4.5e-10 68.2 122 40.2
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 7.7e-10 67.4 123 37.4
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 1.0e-09 67.0 132 37.9
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 1.7e-09 66.2 124 40.3
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 2.2e-09 65.9 120 40.0
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 2.9e-09 65.5 120 40.8
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 3.8e-09 65.1 115 40.9
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 8.5e-09 63.9 129 38.0
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 2.5e-08 62.4 113 37.2
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 2.5e-08 62.4 115 39.1
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 4.2e-08 61.6 121 38.8
Nitab4.5_0000033g0450 Nicotiana tabacum HOM05D012691 ORTHO05D009966 3.6e-07 58.5 126 34.9
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 3.6e-07 58.5 113 38.1
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 6.1e-07 57.8 114 36.0
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 8.0e-07 57.4 114 36.0
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 1.0e-06 57.0 106 41.5
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 1.4e-06 56.6 122 40.2
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.3e-06 55.8 121 36.4
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 2.3e-06 55.8 102 37.3
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 2.3e-06 55.8 102 37.3
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 2.3e-06 55.8 118 36.4
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 4.0e-06 55.1 119 36.1
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 6.7e-06 54.3 121 35.5
Oeu050767.1 Olea europaea HOM05D028002 ORTHO05D009966 6.7e-06 54.3 104 35.6


User provided reference genes

Program Settings