Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 5.7e-118 427.6 211 100.0
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 2.3e-82 309.3 209 71.3
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 2.5e-81 305.8 208 69.7
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 6.8e-79 297.7 212 66.0
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 7.6e-78 294.3 211 67.3
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 1.7e-77 293.1 215 67.4
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 2.2e-77 292.7 219 66.2
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 3.8e-77 292.0 210 67.6
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 3.8e-77 292.0 214 68.2
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 8.4e-77 290.8 213 67.1
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.4e-76 290.0 208 67.8
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 2.4e-76 289.3 213 68.5
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 5.4e-76 288.1 208 68.3
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.6e-75 286.6 210 68.1
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 2.1e-75 286.2 210 65.2
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.0e-74 283.9 226 64.6
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.7e-74 283.1 209 62.2
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.0e-74 282.3 210 63.8
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 6.6e-74 281.2 208 65.9
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.5e-73 280.0 210 65.2
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 2.5e-73 279.3 210 65.2
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.5e-73 279.3 210 65.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.5e-73 279.3 248 57.7
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 7.3e-73 277.7 215 64.7
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 3.6e-72 275.4 210 65.2
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 3.6e-72 275.4 210 62.4
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 3.6e-72 275.4 210 62.4
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.1e-71 273.9 217 62.7
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.4e-71 273.5 210 63.3
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.4e-71 273.5 215 63.3
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 1.8e-71 273.1 211 64.5
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 2.4e-71 272.7 215 63.3
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 3.1e-71 272.3 210 61.9
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 6.9e-71 271.2 232 58.6
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.0e-71 270.8 195 65.6
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.0e-70 269.6 210 62.4
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.6e-70 269.2 217 61.8
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 4.4e-70 268.5 208 63.9
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 4.4e-70 268.5 211 63.0
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.7e-69 266.5 208 63.5
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 1.7e-69 266.5 215 60.9
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 2.2e-69 266.2 218 58.7
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 2.2e-69 266.2 210 62.9
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 2.9e-69 265.8 210 60.0
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.9e-69 265.0 215 62.3
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 8.4e-69 264.2 212 62.7
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.4e-68 263.5 223 58.7
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 2.4e-68 262.7 210 59.5
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 2.4e-68 262.7 213 61.0
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 5.4e-68 261.5 210 59.5
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 5.4e-68 261.5 211 62.1
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 5.4e-68 261.5 215 59.5
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 7.1e-68 261.2 210 59.5
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.2e-67 260.4 210 58.1
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.2e-67 260.4 210 59.0
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.6e-67 260.0 212 59.0
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.6e-67 260.0 210 61.4
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 2.1e-67 259.6 211 63.0
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 3.5e-67 258.8 211 63.0
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.6e-67 258.5 210 61.0
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 6.6e-66 254.6 210 60.5
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.1e-65 253.8 215 60.9
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.5e-65 253.4 212 60.4
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 1.5e-65 253.4 210 60.5
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 1.9e-65 253.1 211 61.1
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 3.3e-65 252.3 212 58.5
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 3.3e-65 252.3 212 58.5
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 1.3e-64 250.4 211 58.8
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 2.1e-64 249.6 211 59.2
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 2.8e-64 249.2 212 59.4
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 6.2e-64 248.1 208 61.5
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 8.1e-64 247.7 214 57.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 8.1e-64 247.7 211 60.2
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.4e-63 246.9 208 56.7
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 1.8e-63 246.5 212 59.0
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.4e-63 246.1 203 59.6
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 4.0e-63 245.4 213 56.8
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 1.2e-62 243.8 211 60.2
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 3.4e-62 242.3 211 58.3
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 2.2e-61 239.6 208 59.1
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 3.8e-61 238.8 199 57.3
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.4e-60 236.9 239 51.0
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 1.2e-59 233.8 215 55.3
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 3.4e-54 215.7 134 70.1
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 3.4e-54 215.7 214 51.9
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 7.9e-51 204.5 161 63.4
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-50 203.8 218 55.0
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 4.3e-49 198.7 141 61.0
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 2.4e-47 193.0 178 51.1
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.0e-45 187.6 183 50.8
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.2e-43 180.6 195 50.8
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 3.5e-43 179.1 199 54.3
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.0e-37 161.0 136 55.9
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 3.8e-37 159.1 161 53.4
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 5.0e-37 158.7 167 51.5
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 4.2e-36 155.6 177 47.5
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.6e-35 153.7 131 56.5
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 2.3e-34 149.8 106 67.0
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 2.0e-25 120.2 69 75.4
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 2.0e-25 120.2 178 35.4
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 8.2e-24 114.8 128 45.3
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 5.9e-22 108.6 100 58.0
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 8.5e-21 104.8 182 36.3
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 8.5e-21 104.8 178 36.5
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 9.4e-20 101.3 56 76.8
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 1.6e-19 100.5 114 51.8
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.8e-15 87.0 85 55.3
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 1.2e-14 84.3 99 52.5
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 1.0e-13 81.3 49 67.3
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.4e-10 70.9 206 32.0
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 2.0e-09 67.0 217 29.5
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 2.6e-09 66.6 39 69.2
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 3.7e-08 62.8 36 72.2
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 2.4e-07 60.1 98 44.9
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 1.6e-06 57.4 28 78.6
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 7.7e-06 55.1 62 38.7
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 7.7e-06 55.1 62 38.7


User provided reference genes

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