Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C66T3 Lonicera japonica HOM05D009141 ORTHO05D010689 1.8e-71 272.7 161 100.0
Lj7C67T0 Lonicera japonica HOM05D009141 ORTHO05D010689 5.1e-66 254.6 161 95.0
Lj7C64T6 Lonicera japonica HOM05D009141 ORTHO05D010689 2.6e-54 215.7 161 83.9
Lj7C67G1 Lonicera japonica HOM05D009141 ORTHO05D010689 4.5e-38 161.8 119 86.6
CiPaw.02G009200 Carya illinoinensis HOM05D017207 ORTHO05D010689 1.4e-15 87.0 172 45.3
CiPaw.01G021100 Carya illinoinensis HOM05D017207 ORTHO05D010689 6.9e-15 84.7 162 38.3
QL06p042164 Quercus lobata HOM05D017207 ORTHO05D010689 5.9e-14 81.6 130 41.5
Atru.chr3.366 Acer truncatum HOM05D009141 ORTHO05D010689 5.0e-13 78.6 111 43.2
Atru.chr3.368 Acer truncatum HOM05D009141 ORTHO05D010689 1.1e-12 77.4 118 41.5
Atru.chr3.363 Acer truncatum HOM05D009141 ORTHO05D010689 1.4e-12 77.0 111 43.2
Dinv29971 Davidia involucrata HOM05D008581 ORTHO05D009541 1.4e-12 77.0 114 41.2
ECA232G1274 Erigeron canadensis HOM05D009141 ORTHO05D010689 5.5e-12 75.1 108 38.9
Cfa003999 Carpinus fangiana HOM05D017207 ORTHO05D010689 1.2e-11 73.9 118 37.3
Gohir.D03G020750 Gossypium hirsutum HOM05D009141 ORTHO05D010689 1.6e-11 73.6 124 39.5
DCAR_025722 Daucus carota HOM05D009141 ORTHO05D010689 4.7e-11 72.0 194 38.7
Gohir.A02G159600 Gossypium hirsutum HOM05D009141 ORTHO05D010689 1.8e-10 70.1 124 37.1
Gorai.003G021500 Gossypium raimondii HOM05D009141 ORTHO05D010689 1.8e-10 70.1 124 38.7
MD02G1169400 Malus domestica HOM05D007434 ORTHO05D019139 1.8e-10 70.1 114 44.7
Duzib264G1041 Durio zibethinus HOM05D009141 ORTHO05D010689 2.3e-10 69.7 116 40.5
Gohir.D03G020500 Gossypium hirsutum HOM05D009141 ORTHO05D010689 3.9e-10 68.9 124 37.9
Atru.chr3.371 Acer truncatum HOM05D009141 ORTHO05D010689 8.8e-10 67.8 118 38.1
Atru.chr3.383 Acer truncatum HOM05D009141 ORTHO05D010689 8.8e-10 67.8 118 38.1
Gorai.003G021900 Gossypium raimondii HOM05D009141 ORTHO05D010689 8.8e-10 67.8 121 38.8
Prupe.7G135900 Prunus persica HOM05D007434 ORTHO05D019139 1.5e-09 67.0 99 45.5
Oeu004849.1 Olea europaea HOM05D014436 ORTHO05D017092 3.3e-09 65.9 107 42.1
Gohir.D03G021033 Gossypium hirsutum HOM05D009141 ORTHO05D010689 5.7e-09 65.1 110 38.2
Gohir.D03G021066 Gossypium hirsutum HOM05D009141 ORTHO05D010689 5.7e-09 65.1 124 37.1
MD15G1281900 Malus domestica HOM05D007434 ORTHO05D019139 7.4e-09 64.7 99 42.4
Gohir.A02G159550 Gossypium hirsutum HOM05D009141 ORTHO05D010689 9.7e-09 64.3 105 41.0
Gorai.003G022600 Gossypium raimondii HOM05D009141 ORTHO05D010689 9.7e-09 64.3 111 39.6
Haze_17565 Corylus avellana HOM05D016981 ORTHO05D016155 2.2e-08 63.2 115 36.5
Gohir.D03G020900 Gossypium hirsutum HOM05D009141 ORTHO05D010689 2.2e-08 63.2 112 37.5
vmacro17939 Vaccinium macrocarpon HOM05D046142 ORTHO05D010689 2.2e-08 63.2 109 38.5
Gohir.A02G159500 Gossypium hirsutum HOM05D009141 ORTHO05D010689 2.8e-08 62.8 124 37.1
Duzib187G0488 Durio zibethinus HOM05D009141 ORTHO05D010689 3.7e-08 62.4 118 38.1
Oeu004845.1 Olea europaea HOM05D014436 ORTHO05D017092 4.8e-08 62.0 107 41.1
Peaxi162Scf00685g00074 Petunia axillaris HOM05D067106 ORTHO05D010689 4.8e-08 62.0 121 37.2
CiPaw.01G020800 Carya illinoinensis HOM05D017207 ORTHO05D010689 8.2e-08 61.2 161 32.3
QL02p005823 Quercus lobata HOM05D016981 ORTHO05D016155 8.2e-08 61.2 123 36.6
Sabra05G0109300 Salix brachista HOM05D025385 ORTHO05D026080 1.1e-07 60.8 109 40.4
Oeu009746.1 Olea europaea HOM05D014436 ORTHO05D017092 1.4e-07 60.5 112 40.2
Potri.005G136700 Populus trichocarpa HOM05D025385 ORTHO05D026080 1.4e-07 60.5 115 38.3
Gohir.D03G020400 Gossypium hirsutum HOM05D009141 ORTHO05D010689 2.4e-07 59.7 121 36.4
Duzib187G1080 Durio zibethinus HOM05D009141 ORTHO05D010689 3.1e-07 59.3 121 38.0
Oeu004858.1 Olea europaea HOM05D014436 ORTHO05D017092 3.1e-07 59.3 107 39.3
Oeu004848.1 Olea europaea HOM05D014436 ORTHO05D017092 4.1e-07 58.9 98 38.8
Oeu050760.1 Olea europaea HOM05D014436 ORTHO05D017092 4.1e-07 58.9 117 35.0
Gorai.003G021600 Gossypium raimondii HOM05D009141 ORTHO05D010689 7.0e-07 58.2 56 50.0
Oeu004844.1 Olea europaea HOM05D014436 ORTHO05D017092 7.0e-07 58.2 97 39.2
PGR102G0300 Punica granatum HOM05D060341 ORTHO05D050611 1.2e-06 57.4 114 35.1
Eucgr.H02001 Eucalyptus grandis HOM05D044465 ORTHO05D010689 1.6e-06 57.0 92 40.2
Oeu050764.1 Olea europaea HOM05D014436 ORTHO05D017092 1.6e-06 57.0 122 39.3
CiPaw.01G020400 Carya illinoinensis HOM05D017207 ORTHO05D010689 2.0e-06 56.6 189 25.9
Manes.12G100100 Manihot esculenta HOM05D061944 ORTHO05D012940 2.0e-06 56.6 104 40.4
Solyc03g044560.1 Solanum lycopersicum HOM05D067106 ORTHO05D010689 2.0e-06 56.6 114 32.5
Duzib187G1857 Durio zibethinus HOM05D009141 ORTHO05D010689 2.6e-06 56.2 121 37.2
COL.COLO4_11387 Corchorus olitorius HOM05D009141 ORTHO05D010689 3.5e-06 55.8 111 36.9
Haze_15424 Corylus avellana HOM05D017207 ORTHO05D010689 3.5e-06 55.8 65 46.2
Cfa018510 Carpinus fangiana HOM05D016981 ORTHO05D016155 5.9e-06 55.1 113 38.9
Gorai.003G022100 Gossypium raimondii HOM05D009141 ORTHO05D010689 5.9e-06 55.1 55 49.1


User provided reference genes

Program Settings