Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 7.4e-56 220.3 112 100.0
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 1.8e-41 172.6 112 80.4
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 2.3e-41 172.2 112 80.4
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 1.4e-38 162.9 104 83.7
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 1.7e-36 156.0 112 74.1
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 5.3e-22 107.8 124 50.8
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 7.5e-16 87.4 127 46.5
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 1.3e-15 86.7 127 44.9
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 6.3e-15 84.3 126 44.4
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 2.4e-14 82.4 123 45.5
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 3.1e-14 82.0 119 44.5
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 9.1e-14 80.5 132 42.4
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 1.6e-13 79.7 118 46.6
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 3.5e-13 78.6 115 47.8
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 3.5e-13 78.6 125 45.6
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.3e-12 76.6 118 44.1
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 5.0e-12 74.7 120 44.2
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 1.5e-11 73.2 115 45.2
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 1.9e-11 72.8 122 41.0
Nitab4.5_0000033g0450 Nicotiana tabacum HOM05D012691 ORTHO05D009966 3.2e-11 72.0 126 38.9
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 4.2e-11 71.6 124 41.1
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 4.2e-11 71.6 129 41.1
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 4.2e-11 71.6 114 41.2
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 1.2e-10 70.1 114 40.4
Oeu050767.1 Olea europaea HOM05D028002 ORTHO05D009966 8.0e-10 67.4 108 39.8
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 3.0e-09 65.5 124 38.7
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 3.0e-09 65.5 110 40.9
Gohir.D03G021000 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.0e-09 65.1 112 41.1
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 4.0e-09 65.1 104 40.4
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 4.0e-09 65.1 104 40.4
Nitab4.5_0001064g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 5.2e-09 64.7 126 36.5
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 8.8e-09 63.9 117 39.3
Gorai.003G022400 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.2e-08 63.5 112 41.1
Duzib264G0396 Durio zibethinus HOM05D013202 ORTHO05D009966 2.6e-08 62.4 120 40.0
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.4e-08 62.0 124 38.7
Nitab4.5_0000310g0110 Nicotiana tabacum HOM05D012691 ORTHO05D009966 3.4e-08 62.0 126 36.5
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 4.4e-08 61.6 114 36.8
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 5.7e-08 61.2 119 37.8
CiPaw.01G020300 Carya illinoinensis HOM05D015383 ORTHO05D009966 7.5e-08 60.8 109 41.3
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 7.5e-08 60.8 118 39.0
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.3e-07 60.1 108 41.7
Nitab4.5_0013032g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.3e-07 60.1 126 36.5
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 2.2e-07 59.3 104 40.4
ECA232G4194 Erigeron canadensis HOM05D008581 ORTHO05D009966 3.7e-07 58.5 115 41.7
Peaxi162Scf00685g00066 Petunia axillaris HOM05D012691 ORTHO05D009966 6.3e-07 57.8 120 36.7
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 8.3e-07 57.4 108 40.7
Lsat_1_v5_gn_4_167560 Lactuca sativa HOM05D008581 ORTHO05D009966 8.3e-07 57.4 113 40.7
Nitab4.5_0000728g0060 Nicotiana tabacum HOM05D012691 ORTHO05D017744 1.4e-06 56.6 120 37.5
ClCG01G016740 Citrullus lanatus HOM05D022436 ORTHO05D009966 1.8e-06 56.2 117 41.0
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.8e-06 56.2 112 40.2
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.8e-06 56.2 112 40.2
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.8e-06 56.2 112 40.2
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.4e-06 55.8 112 40.2
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 2.4e-06 55.8 112 36.6
Ah.02g124160 Amaranthus hybridus HOM05D015383 ORTHO05D009966 3.1e-06 55.5 117 37.6
Gohir.A12G070300 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.1e-06 55.1 112 36.6
CiPaw.01G020000 Carya illinoinensis HOM05D015383 ORTHO05D009966 7.0e-06 54.3 119 35.3
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 9.1e-06 53.9 129 38.0
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 9.1e-06 53.9 125 34.4
PGSC0003DMG400040657 Solanum tuberosum HOM05D012691 ORTHO05D017744 9.1e-06 53.9 108 35.2


User provided reference genes

Program Settings