Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C643T8 Lonicera japonica HOM05D000522 ORTHO05D235261 4.0e-15 83.6 42 100.0
Lj7A644G12 Lonicera japonica HOM05D000522 ORTHO05D004380 1.6e-11 71.6 35 100.0
TAR383G0974 Trochodendron aralioides HOM05D000522 ORTHO05D004380 2.4e-07 57.8 30 90.0
Aqoxy7G01827 Aquilegia oxysepala HOM05D000522 ORTHO05D004380 3.1e-07 57.4 33 78.8
HanXRQChr10g0317741 Helianthus annuus HOM05D000522 ORTHO05D004380 5.3e-07 56.6 31 83.9
Cpa.g.sc23.137 Carica papaya HOM05D000522 ORTHO05D004380 6.9e-07 56.2 34 76.5
A03p43630 Brassica napus HOM05D000522 ORTHO05D004380 9.0e-07 55.8 34 76.5
Aqoxy7G03774 Aquilegia oxysepala HOM05D000522 ORTHO05D004380 1.2e-06 55.5 35 71.4
CARHR100460 Cardamine hirsuta HOM05D000522 ORTHO05D004380 1.2e-06 55.5 34 82.4
ECA234G1779 Erigeron canadensis HOM05D000522 ORTHO05D004380 1.2e-06 55.5 34 73.5
AL9U10300 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 1.5e-06 55.1 35 74.3
AT4G13360 Arabidopsis thaliana HOM05D000522 ORTHO05D004380 1.5e-06 55.1 35 74.3
ECA236G2754 Erigeron canadensis HOM05D000522 ORTHO05D004380 1.5e-06 55.1 35 71.4
HanXRQChr05g0138321 Helianthus annuus HOM05D000522 ORTHO05D004380 1.5e-06 55.1 35 71.4
PSO063G3875 Papaver somniferum HOM05D000522 ORTHO05D004380 1.5e-06 55.1 34 76.5
PSO782G3947 Papaver somniferum HOM05D000522 ORTHO05D004380 1.5e-06 55.1 34 76.5
AT3G24360 Arabidopsis thaliana HOM05D000522 ORTHO05D004380 2.0e-06 54.7 33 75.8
Migut.K00465 Erythranthe guttata HOM05D000522 ORTHO05D004380 2.0e-06 54.7 29 86.2
BcaB03g14587 Brassica carinata HOM05D000522 ORTHO05D004380 2.6e-06 54.3 34 73.5
Lsat_1_v5_gn_5_100220 Lactuca sativa HOM05D000522 ORTHO05D004380 2.6e-06 54.3 28 89.3
Actinidia20339 Actinidia chinensis HOM05D000522 ORTHO05D004380 3.4e-06 53.9 30 83.3
Oeu058085.3 Olea europaea HOM05D000522 ORTHO05D004380 3.4e-06 53.9 35 71.4
SGA_v2.0_scaffold183G39892 Striga asiatica HOM05D000522 ORTHO05D004380 3.4e-06 53.9 29 82.8
TWI63G0481 Tripterygium wilfordii HOM05D000522 ORTHO05D004380 3.4e-06 53.9 31 80.6
EL10Ac8g18536 Beta vulgaris HOM05D000522 ORTHO05D004380 4.5e-06 53.5 34 73.5
BcaC01g03316 Brassica carinata HOM05D000522 ORTHO05D004380 4.5e-06 53.5 34 73.5
C03p53740 Brassica napus HOM05D000522 ORTHO05D004380 4.5e-06 53.5 34 73.5
BolC3t17634H Brassica oleracea HOM05D000522 ORTHO05D004380 4.5e-06 53.5 34 73.5
BraA03t13500Z Brassica rapa HOM05D000522 ORTHO05D004380 4.5e-06 53.5 34 73.5
Lsat_1_v5_gn_8_94761 Lactuca sativa HOM05D000522 ORTHO05D004380 4.5e-06 53.5 35 68.6
Nn8g39261 Nelumbo nucifera HOM05D000522 ORTHO05D004380 4.5e-06 53.5 30 80.0
Pp3c14_25790 Physcomitrium patens HOM05D000522 ORTHO05D004380 4.5e-06 53.5 32 75.0
Sp3g22170 Schrenkiella parvula HOM05D000522 ORTHO05D004380 4.5e-06 53.5 36 75.0
ATR0037G022 Amborella trichopoda HOM05D000522 ORTHO05D004380 5.8e-06 53.1 30 80.0
CSS0022610 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D004380 5.8e-06 53.1 31 80.6
AUR62011027 Chenopodium quinoa HOM05D000522 ORTHO05D004380 5.8e-06 53.1 34 73.5
AUR62033399 Chenopodium quinoa HOM05D000522 ORTHO05D004380 5.8e-06 53.1 34 73.5
Ciclev10008327m.g Citrus clementina HOM05D000522 ORTHO05D004380 5.8e-06 53.1 35 68.6
Gohir.A13G196800 Gossypium hirsutum HOM05D000522 ORTHO05D004380 5.8e-06 53.1 29 82.8
Gohir.D13G202100 Gossypium hirsutum HOM05D000522 ORTHO05D004380 5.8e-06 53.1 29 82.8
Gorai.013G231000 Gossypium raimondii HOM05D000522 ORTHO05D004380 5.8e-06 53.1 29 82.8
Lj4g0021382 Lotus japonicus HOM05D000522 ORTHO05D004380 5.8e-06 53.1 29 86.2
Nn2g11819 Nelumbo nucifera HOM05D000522 ORTHO05D004380 5.8e-06 53.1 29 82.8
THA.LOC104808747 Tarenaya hassleriana HOM05D000522 ORTHO05D004380 5.8e-06 53.1 34 70.6
vmacro06199 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 5.8e-06 53.1 30 83.3
Aa31LG8G11100 Aethionema arabicum HOM05D000522 ORTHO05D004380 7.6e-06 52.8 34 70.6
CAN.G300.3 Capsicum annuum HOM05D000522 ORTHO05D004380 7.6e-06 52.8 35 77.1
CDE02G2108 Ceratophyllum demersum HOM05D000522 ORTHO05D004380 7.6e-06 52.8 34 70.6
Duzib150G0749 Durio zibethinus HOM05D000522 ORTHO05D004380 7.6e-06 52.8 29 82.8
Thhalv10025298m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 7.6e-06 52.8 35 71.4
FAN28G2217 Fragaria x ananassa HOM05D000522 ORTHO05D004380 7.6e-06 52.8 31 80.6
Medtr8g103840 Medicago truncatula HOM05D000522 ORTHO05D004380 7.6e-06 52.8 34 73.5
Potri.006G155700 Populus trichocarpa HOM05D000522 ORTHO05D004380 7.6e-06 52.8 35 65.7
Potri.006G156350 Populus trichocarpa HOM05D000522 ORTHO05D004380 7.6e-06 52.8 35 65.7
Sabra06G0123500 Salix brachista HOM05D000522 ORTHO05D004380 7.6e-06 52.8 31 74.2
SalBow1G3152 Salvia bowleyana HOM05D000522 ORTHO05D004380 7.6e-06 52.8 29 82.8
AL3G39830 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 1.0e-05 52.4 33 72.7
Carub.0007s2921 Capsella rubella HOM05D000522 ORTHO05D004380 1.0e-05 52.4 29 86.2
Thhalv10002535m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 1.0e-05 52.4 29 82.8
GSVIVG01015428001 Vitis vinifera HOM05D000522 ORTHO05D004380 1.0e-05 52.4 35 68.6


User provided reference genes

Program Settings