Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-209 731.5 372 100.0
Lj6A55T15 Lonicera japonica HOM05D052045 ORTHO05D001339 4.4e-137 491.9 359 77.7
Lj3C1079G16 Lonicera japonica HOM05D005986 ORTHO05D007467 4.6e-78 295.8 353 54.1
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-43 180.6 378 33.1
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-42 177.9 380 32.6
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-36 156.8 360 31.7
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 1.4e-34 151.4 299 33.8
Lju41C56T5 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-24 118.6 361 28.8
Lj6A715G13 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-23 113.6 210 36.2
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 9.1e-18 95.5 107 38.3
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 9.1e-18 95.5 107 39.3
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-17 93.6 103 36.9
Lj3A889T70 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-17 93.2 147 38.8
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 7.7e-17 92.4 109 37.6
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 7.7e-17 92.4 109 38.5
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-16 91.7 115 38.3
Lj2C800T8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-16 90.5 109 38.5
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-16 89.7 105 37.1
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-16 89.7 105 37.1
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-16 89.7 107 34.6
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-16 89.7 107 35.5
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 8.5e-16 89.0 107 34.6
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 8.5e-16 89.0 107 34.6
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 8.5e-16 89.0 148 30.4
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-15 88.6 178 29.2
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-15 88.2 115 38.3
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 1.5e-15 88.2 191 29.8
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-15 87.8 103 35.0
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-15 87.4 115 38.3
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-15 87.4 105 37.1
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-15 87.0 94 40.4
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 5.5e-15 86.3 178 30.9
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 7.2e-15 85.9 178 29.2
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 9.4e-15 85.5 115 36.5
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 9.4e-15 85.5 107 32.7
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-14 84.7 107 35.5
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-14 84.7 108 37.0
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-14 84.0 86 40.7
Lj2C125T3 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-14 83.6 192 33.3
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 4.7e-14 83.2 115 36.5
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-14 83.2 105 35.2
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 8.0e-14 82.4 183 29.0
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 8.0e-14 82.4 89 39.3
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-13 81.6 77 39.0
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 1.4e-13 81.6 84 42.9
Lj2P870T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-13 81.3 105 32.4
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-13 81.3 84 40.5
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-13 81.3 89 38.2
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-13 80.9 118 37.3
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-13 80.9 89 38.2
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-13 80.5 101 39.6
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-13 80.5 91 38.5
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-13 80.5 105 32.4
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-13 80.5 105 32.4
Lj2C7T4 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-13 80.1 106 34.0
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-13 80.1 160 28.8
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-13 80.1 91 35.2
Lj6A103G46 Lonicera japonica HOM05D002180 ORTHO05D001339 5.2e-13 79.7 188 25.0
Lju41A59G27 Lonicera japonica HOM05D002180 ORTHO05D001339 5.2e-13 79.7 105 36.2
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 6.7e-13 79.3 89 38.2
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 6.7e-13 79.3 372 24.7
Lj1A438T30 Lonicera japonica HOM05D002180 ORTHO05D001339 8.8e-13 79.0 86 45.3
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 8.8e-13 79.0 96 37.5
Lj3A585T50 Lonicera japonica HOM05D002180 ORTHO05D001339 8.8e-13 79.0 84 39.3
Lj6P285T23 Lonicera japonica HOM05D002180 ORTHO05D001339 8.8e-13 79.0 87 35.6
Lj9C248G5 Lonicera japonica HOM05D002180 ORTHO05D001339 8.8e-13 79.0 84 44.0
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-12 78.6 84 39.3
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-12 78.2 105 33.3
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-12 77.8 373 22.3
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-12 77.8 72 40.3
Lj7P583T27 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-12 77.8 94 36.2
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 2.6e-12 77.4 191 28.3
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 3.3e-12 77.0 90 36.7
Lj2C42T4 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-12 77.0 84 39.3
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-12 77.0 183 31.7
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-12 77.0 366 26.2
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 4.4e-12 76.6 83 42.2
Lj5C672T6 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-12 76.3 93 37.6
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-12 75.5 85 42.4
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-12 75.5 97 37.1
Lju583C3G3 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-12 75.5 105 36.2
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 1.3e-11 75.1 101 36.6
Lj2C8G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-11 74.7 84 41.7
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 1.7e-11 74.7 190 27.9
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-11 74.7 106 33.0
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 1.7e-11 74.7 100 37.0
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-11 74.3 369 26.0
Lj7C730T4 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-11 74.3 91 36.3
Lj4C42T8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-11 73.9 159 28.3
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 2.8e-11 73.9 88 37.5
Lj5P747T21 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-11 73.2 87 41.4
Lj9P474T24 Lonicera japonica HOM05D009066 ORTHO05D001339 4.8e-11 73.2 178 29.2
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-11 73.2 174 27.0
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-11 72.8 359 24.8
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 6.3e-11 72.8 188 27.1
Lj1C1063T3 Lonicera japonica HOM05D002180 ORTHO05D001339 8.2e-11 72.4 84 40.5
Lj2C953T7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-10 72.0 77 37.7
Lj6A393T51 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-10 71.2 85 41.2
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 2.4e-10 70.9 88 35.2
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-10 70.1 64 43.8
Lj2C7T5 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-10 70.1 85 34.1
Lj4P575T24 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-10 70.1 105 33.3
Lj9A249G18 Lonicera japonica HOM05D002180 ORTHO05D001339 5.3e-10 69.7 84 40.5
Lj2C10T1 Lonicera japonica HOM05D009066 ORTHO05D001339 9.1e-10 68.9 84 39.3
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 9.1e-10 68.9 76 42.1
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-09 68.6 99 34.3
Lj3C203G4 Lonicera japonica HOM05D009066 ORTHO05D001339 1.2e-09 68.6 197 29.4
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-09 68.2 99 34.3
Lj5P198T48 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-09 67.8 76 39.5
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 2.0e-09 67.8 78 39.7
Lj3A270T43 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-09 67.4 73 38.4
Lj8C523G12 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-09 67.4 158 26.6
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.5e-09 67.0 99 35.4
Lj1P804T34 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-09 67.0 88 34.1
Lj2A804T55 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-09 66.6 342 23.7
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 5.9e-09 66.2 175 29.1
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 5.9e-09 66.2 187 27.3
Lju50A23T25 Lonicera japonica HOM05D002180 ORTHO05D001339 5.9e-09 66.2 244 25.4
Lj9A423T72 Lonicera japonica HOM05D009066 ORTHO05D001339 7.7e-09 65.9 103 34.0
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 1.0e-08 65.5 75 38.7
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 1.0e-08 65.5 88 35.2
Lj7P755T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-08 64.7 68 39.7
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 1.7e-08 64.7 89 36.0
Nn1g06295 Nelumbo nucifera HOM05D011113 ORTHO05D001339 2.9e-08 63.9 62 46.8
Lj3P194T52 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-08 63.2 77 39.0
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 6.5e-08 62.8 127 29.1
Lj7P754T25 Lonicera japonica HOM05D002180 ORTHO05D001339 6.5e-08 62.8 73 35.6
Nn4g26617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 6.5e-08 62.8 87 36.8
Sed0001869 Sechium edule HOM05D007588 ORTHO05D001339 6.5e-08 62.8 88 36.4
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 8.5e-08 62.4 63 41.3
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 1.5e-07 61.6 91 33.0
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.9e-07 61.2 87 33.3
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.9e-07 61.2 180 28.9
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.5e-07 60.8 102 32.4
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.5e-07 60.8 87 37.9
Lj5P610T17 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-07 60.8 57 42.1
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 2.5e-07 60.8 106 27.4
Lj7A574G60 Lonicera japonica HOM05D003119 ORTHO05D003559 3.2e-07 60.5 74 40.5
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 3.2e-07 60.5 79 39.2
CSS0007549 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 4.2e-07 60.1 107 31.8
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.2e-07 60.1 101 32.7
Nn2g13826 Nelumbo nucifera HOM05D011113 ORTHO05D001339 4.2e-07 60.1 79 44.3
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.5e-07 59.7 102 33.3
Lj3P276T13 Lonicera japonica HOM05D002180 ORTHO05D001339 7.2e-07 59.3 58 43.1
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 7.2e-07 59.3 87 29.9
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 9.4e-07 58.9 67 44.8
Lj9A6T13 Lonicera japonica HOM05D002180 ORTHO05D001339 9.4e-07 58.9 69 39.1
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 9.4e-07 58.9 88 29.5
Lj2P897T21 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-06 58.5 84 31.0
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 1.6e-06 58.2 85 34.1
Lj6P216T13 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-06 57.4 64 32.8
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 3.6e-06 57.0 71 38.0
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 3.6e-06 57.0 85 35.3
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 4.7e-06 56.6 184 26.1
Lj2P420T16 Lonicera japonica HOM05D009066 ORTHO05D001339 8.0e-06 55.8 57 36.8


User provided reference genes

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