Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C574T11 Lonicera japonica HOM05D003119 ORTHO05D003559 1.8e-161 572.4 264 100.0
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 1.8e-137 492.7 249 88.4
Dinv43414 Davidia involucrata HOM05D003119 ORTHO05D003559 2.0e-136 489.2 249 86.7
TAR633G1226 Trochodendron aralioides HOM05D003119 ORTHO05D003559 2.6e-136 488.8 249 86.7
Manes.10G139100 Manihot esculenta HOM05D003119 ORTHO05D003559 8.4e-135 483.8 249 85.1
CSS0008603 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.4e-134 483.0 249 85.1
CSS0027617 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.4e-134 483.0 249 85.1
GSVIVG01032165001 Vitis vinifera HOM05D003119 ORTHO05D003559 1.6e-133 479.6 249 85.1
Atru.chr11.2581 Acer truncatum HOM05D003119 ORTHO05D003559 2.7e-133 478.8 249 83.9
Duzib133G0610 Durio zibethinus HOM05D003119 ORTHO05D003559 3.5e-133 478.4 249 84.3
Potri.009G058100 Populus trichocarpa HOM05D003119 ORTHO05D003559 3.5e-133 478.4 249 84.7
Cpa.g.sc125.32 Carica papaya HOM05D003119 ORTHO05D003559 4.6e-133 478.0 252 82.5
RcHm_v2.0_Chr1g0317311 Rosa chinensis HOM05D003119 ORTHO05D003559 1.0e-132 476.9 249 83.9
Nn7g36274 Nelumbo nucifera HOM05D003119 ORTHO05D003559 1.8e-132 476.1 249 83.5
TWI60G0203 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 2.3e-132 475.7 249 83.1
HanXRQChr16g0524981 Helianthus annuus HOM05D003119 ORTHO05D003559 6.7e-132 474.2 249 83.9
Thecc.01G407300 Theobroma cacao HOM05D003119 ORTHO05D003559 6.7e-132 474.2 249 83.5
Gorai.004G170700 Gossypium raimondii HOM05D003119 ORTHO05D003559 1.1e-131 473.4 249 83.1
COL.COLO4_04878 Corchorus olitorius HOM05D003119 ORTHO05D003559 1.5e-131 473.0 249 83.9
Rhsim07G0058300 Rhododendron simsii HOM05D003119 ORTHO05D003559 1.9e-131 472.6 249 83.1
Lsat_1_v5_gn_4_32101 Lactuca sativa HOM05D003119 ORTHO05D003559 2.5e-131 472.2 249 84.3
Aqoxy4G00031 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 5.7e-131 471.1 249 81.9
FAN01G3156 Fragaria x ananassa HOM05D003119 ORTHO05D003559 7.4e-131 470.7 249 83.5
FAN10G2435 Fragaria x ananassa HOM05D003119 ORTHO05D003559 7.4e-131 470.7 249 83.5
Sc10g0000230 Simmondsia chinensis HOM05D003119 ORTHO05D003559 9.6e-131 470.3 249 81.5
FvH4_7g01470 Fragaria vesca HOM05D003119 ORTHO05D003559 1.3e-130 469.9 249 83.1
EL10Ac2g04355 Beta vulgaris HOM05D003119 ORTHO05D003559 1.6e-130 469.5 249 82.7
Ciclev10030724m.g Citrus clementina HOM05D003119 ORTHO05D003559 1.6e-130 469.5 249 81.5
ECA234G0904 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.6e-130 469.5 249 83.1
Gohir.A08G142900 Gossypium hirsutum HOM05D003119 ORTHO05D003559 1.6e-130 469.5 249 82.7
Ca_14529_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 2.8e-130 468.8 249 81.5
Glyma.10G091000 Glycine max HOM05D003119 ORTHO05D003559 2.8e-130 468.8 249 81.5
FAN06G3340 Fragaria x ananassa HOM05D003119 ORTHO05D003559 3.7e-130 468.4 249 82.7
PSO063G0387 Papaver somniferum HOM05D003119 ORTHO05D003559 8.2e-130 467.2 249 82.3
Medtr3g032980 Medicago truncatula HOM05D003119 ORTHO05D003559 1.8e-129 466.1 249 81.1
Psat5g211360 Pisum sativum HOM05D003119 ORTHO05D003559 1.8e-129 466.1 249 80.3
Migut.B01276 Erythranthe guttata HOM05D003119 ORTHO05D003559 2.4e-129 465.7 249 81.1
Lj3g0004567 Lotus japonicus HOM05D003119 ORTHO05D003559 2.4e-129 465.7 249 80.7
CANSAT80G1880 Cannabis sativa HOM05D003119 ORTHO05D003559 3.1e-129 465.3 249 81.5
TPR.G28382 Trifolium pratense HOM05D000009 ORTHO05D003559 3.1e-129 465.3 249 81.1
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea HOM05D003119 ORTHO05D003559 4.1e-129 464.9 249 79.5
CAN.G219.63 Capsicum annuum HOM05D003119 ORTHO05D003559 4.1e-129 464.9 249 82.3
CiPaw.14G002300 Carya illinoinensis HOM05D003119 ORTHO05D003559 4.1e-129 464.9 249 81.1
CiPaw.13G007600 Carya illinoinensis HOM05D003119 ORTHO05D003559 5.3e-129 464.5 249 80.3
Phvul.005G023300 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 1.5e-128 463.0 249 80.3
QL04p009441 Quercus lobata HOM05D003119 ORTHO05D003559 2.0e-128 462.6 249 81.1
Cfa010802 Carpinus fangiana HOM05D003119 ORTHO05D003559 2.6e-128 462.2 249 81.9
ATR0626G097 Amborella trichopoda HOM05D003119 ORTHO05D003559 3.4e-128 461.8 249 81.1
Haze_03156 Corylus avellana HOM05D003119 ORTHO05D003559 4.5e-128 461.5 249 82.3
VMungo1080G0526 Vigna mungo HOM05D003119 ORTHO05D003559 4.5e-128 461.5 249 79.5
MSTRG.20565 Avicennia marina HOM05D003119 ORTHO05D003559 1.0e-127 460.3 250 81.2
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea HOM05D003119 ORTHO05D003559 1.3e-127 459.9 244 80.7
Lalb_Chr04g0263891 Lupinus albus HOM05D003119 ORTHO05D003559 1.3e-127 459.9 249 80.7
PGR031G0137 Punica granatum HOM05D003119 ORTHO05D003559 2.2e-127 459.1 249 79.5
Sabra09G0042700 Salix brachista HOM05D003119 ORTHO05D003559 2.2e-127 459.1 249 81.9
Cc02_g29010 Coffea canephora HOM05D003119 ORTHO05D003559 1.9e-126 456.1 250 80.4
SalBow5G4976 Salvia bowleyana HOM05D003119 ORTHO05D003559 4.2e-126 454.9 277 73.6
Sopen01g034580 Solanum pennellii HOM05D003119 ORTHO05D003559 4.2e-126 454.9 249 79.9
Zm00001eb394460 Zea mays HOM05D003119 ORTHO05D003559 4.2e-126 454.9 249 78.7
Solyc01g087610.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 1.2e-125 453.4 249 79.9
SGA_v2.0_scaffold119G32756 Striga asiatica HOM05D003119 ORTHO05D003559 1.6e-125 453.0 249 77.5
Sed0001972 Sechium edule HOM05D003119 ORTHO05D003559 2.7e-125 452.2 249 79.5
THA.LOC104809848 Tarenaya hassleriana HOM05D003119 ORTHO05D003559 4.6e-125 451.4 249 79.1
CsaV3_7G030810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 1.1e-123 446.8 249 77.9
Peaxi162Scf00017g02524 Petunia axillaris HOM05D003119 ORTHO05D003559 5.7e-123 444.5 247 78.5
CAN.G853.14 Capsicum annuum HOM05D003119 ORTHO05D003559 3.7e-122 441.8 247 77.7
Nitab4.5_0008441g0010 Nicotiana tabacum HOM05D003119 ORTHO05D003559 6.3e-122 441.0 248 79.4
AUR62009404 Chenopodium quinoa HOM05D003119 ORTHO05D003559 1.4e-121 439.9 253 75.9
Thhalv10012727m.g Eutrema salsugineum HOM05D003119 ORTHO05D003559 1.4e-121 439.9 249 75.9
AT5G13690 Arabidopsis thaliana HOM05D003119 ORTHO05D003559 1.8e-121 439.5 249 75.5
C02p06360 Brassica napus HOM05D003119 ORTHO05D003559 1.8e-121 439.5 249 75.9
BolC2t06579H Brassica oleracea HOM05D003119 ORTHO05D003559 1.8e-121 439.5 249 75.9
Sp6g30330 Schrenkiella parvula HOM05D003119 ORTHO05D003559 2.4e-121 439.1 249 76.3
CARHR199750 Cardamine hirsuta HOM05D003119 ORTHO05D003559 3.1e-121 438.7 249 75.5
BcaNung04192 Brassica carinata HOM05D003119 ORTHO05D003559 4.1e-121 438.3 249 75.5
AL6G24300 Arabidopsis lyrata HOM05D003119 ORTHO05D003559 2.6e-120 435.6 249 74.3
Sopen03g032890 Solanum pennellii HOM05D003119 ORTHO05D003559 2.6e-120 435.6 247 76.5
BraA02t05183Z Brassica rapa HOM05D003119 ORTHO05D003559 3.4e-120 435.3 250 76.0
Carub.0006s1185 Capsella rubella HOM05D003119 ORTHO05D003559 4.5e-120 434.9 249 75.1
CDE07G0712 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 5.9e-120 434.5 245 77.6
A02p02110 Brassica napus HOM05D003119 ORTHO05D003559 7.7e-120 434.1 250 76.0
Actinidia04960 Actinidia chinensis HOM05D003119 ORTHO05D003559 5.0e-119 431.4 247 74.1
Solyc03g150154.1 Solanum lycopersicum HOM05D003119 ORTHO05D003559 5.0e-119 431.4 244 77.0
HPP92_012082 Vanilla planifolia HOM05D003119 ORTHO05D003559 5.0e-119 431.4 249 73.9
Rhsim08G0167900 Rhododendron simsii HOM05D003119 ORTHO05D003559 1.1e-118 430.3 250 73.2
CSS0022012 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 3.2e-118 428.7 247 74.1
Dinv20699 Davidia involucrata HOM05D003119 ORTHO05D003559 4.2e-118 428.3 247 74.1
Potri.012G075932 Populus trichocarpa HOM05D003119 ORTHO05D003559 4.2e-118 428.3 247 74.9
Thecc.03G004100 Theobroma cacao HOM05D003119 ORTHO05D003559 5.5e-118 427.9 247 74.5
vmacro13692 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 2.1e-117 426.0 338 59.8
GSVIVG01007826001 Vitis vinifera HOM05D003119 ORTHO05D003559 3.6e-117 425.2 247 73.7
ATR0712G088 Amborella trichopoda HOM05D003119 ORTHO05D003559 4.6e-117 424.9 247 74.1
Lsat_1_v5_gn_4_73520 Lactuca sativa HOM05D003119 ORTHO05D003559 4.6e-117 424.9 247 73.3
ClCG09G003910 Citrullus lanatus HOM05D003119 ORTHO05D003559 1.8e-116 422.9 234 78.6
Nitab4.5_0003386g0030 Nicotiana tabacum HOM05D003119 ORTHO05D003559 2.3e-116 422.5 234 77.8
Prupe.5G179300 Prunus persica HOM05D003119 ORTHO05D003559 2.3e-116 422.5 247 73.3
Atru.chr9.2402 Acer truncatum HOM05D003119 ORTHO05D003559 3.9e-116 421.8 247 72.9
MBI14_g41235_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 3.9e-116 421.8 247 74.1
Cc04_g12970 Coffea canephora HOM05D003119 ORTHO05D003559 5.1e-116 421.4 247 73.7
Sed0021395 Sechium edule HOM05D003119 ORTHO05D003559 8.8e-116 420.6 261 68.6
HanXRQChr09g0271871 Helianthus annuus HOM05D003119 ORTHO05D003559 1.1e-115 420.2 247 72.9
SalBow3G3123 Salvia bowleyana HOM05D003119 ORTHO05D003559 1.5e-115 419.9 247 72.5
Sabra12G0054100 Salix brachista HOM05D003119 ORTHO05D003559 2.0e-115 419.5 247 73.3
TAR629G2536 Trochodendron aralioides HOM05D003119 ORTHO05D003559 2.0e-115 419.5 247 73.3
CsaV3_1G001810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 2.5e-115 419.1 261 68.2
Nitab4.5_0008927g0020 Nicotiana tabacum HOM05D003119 ORTHO05D003559 4.3e-115 418.3 234 77.4
QL10p012342 Quercus lobata HOM05D003119 ORTHO05D003559 7.4e-115 417.5 247 72.1
vmacro19356 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 7.4e-115 417.5 265 69.1
PGR083G0248 Punica granatum HOM05D003119 ORTHO05D003559 9.7e-115 417.2 247 71.7
SEGI_13141 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 9.7e-115 417.2 247 71.7
Aqoxy3G03116 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 2.2e-114 416.0 247 72.5
TWI15G0194 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 2.8e-114 415.6 247 73.7
Gohir.D07G074200 Gossypium hirsutum HOM05D003119 ORTHO05D003559 3.7e-114 415.2 247 70.9
Eucgr.B00338 Eucalyptus grandis HOM05D003119 ORTHO05D003559 4.8e-114 414.8 248 73.0
Manes.14G070200 Manihot esculenta HOM05D003119 ORTHO05D003559 4.8e-114 414.8 247 72.5
Medtr3g078410 Medicago truncatula HOM05D003119 ORTHO05D003559 4.8e-114 414.8 251 70.9
Ciclev10018883m.g Citrus clementina HOM05D003119 ORTHO05D003559 1.1e-113 413.7 247 72.1
ECA232G0870 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.1e-113 413.7 247 71.3
Ca_16209_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 4.1e-113 411.8 248 72.6
RcHm_v2.0_Chr7g0179731 Rosa chinensis HOM05D003119 ORTHO05D003559 4.1e-113 411.8 247 72.5
FAN18G1370 Fragaria x ananassa HOM05D003119 ORTHO05D003559 5.3e-113 411.4 247 72.1
Oeu018528.1 Olea europaea HOM05D003119 ORTHO05D003559 5.3e-113 411.4 247 70.9
TPR.G31478 Trifolium pratense HOM05D003119 ORTHO05D003559 5.3e-113 411.4 248 71.4
MD14G1187100 Malus domestica HOM05D003119 ORTHO05D003559 6.9e-113 411.0 247 72.1
PSO832G2904 Papaver somniferum HOM05D003119 ORTHO05D003559 9.1e-113 410.6 247 72.1
FvH4_5g16380 Fragaria vesca HOM05D003119 ORTHO05D003559 1.2e-112 410.2 247 72.1
FAN13G2511 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.0e-112 409.5 247 71.7
Psat0s489g0080 Pisum sativum HOM05D003119 ORTHO05D003559 2.6e-112 409.1 248 72.6
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis HOM05D003119 ORTHO05D003559 2.9e-111 405.6 251 70.5
Glyma.06G186000 Glycine max HOM05D003119 ORTHO05D003559 6.5e-111 404.4 249 70.7
Lj1g0014859 Lotus japonicus HOM05D003119 ORTHO05D003559 6.5e-111 404.4 248 71.0
Pp3c17_12040 Physcomitrium patens HOM05D003119 ORTHO05D003559 3.2e-110 402.1 251 68.5
Duzib205G0437 Durio zibethinus HOM05D003119 ORTHO05D003559 5.5e-110 401.4 247 68.8
Mapoly0144s0027 Marchantia polymorpha HOM05D003119 ORTHO05D003559 7.2e-110 401.0 251 69.7
arahy.Tifrunner.gnm1.ann1.7YSS56 Arachis hypogaea HOM05D003119 ORTHO05D003559 4.7e-109 398.3 248 70.2
Gorai.001G078400 Gossypium raimondii HOM05D003119 ORTHO05D003559 1.4e-108 396.7 234 71.4
ClCG06G016700 Citrullus lanatus HOM05D003119 ORTHO05D003559 2.3e-108 396.0 280 61.8
VMungo1309G0904 Vigna mungo HOM05D003119 ORTHO05D003559 3.0e-108 395.6 236 72.9
SMO141G0099 Selaginella moellendorffii HOM05D003119 ORTHO05D003559 3.9e-108 395.2 250 68.4
Zm00001eb068240 Zea mays HOM05D003119 ORTHO05D003559 8.8e-108 394.0 247 67.6
QL04p009329 Quercus lobata HOM05D003119 ORTHO05D003559 1.1e-107 393.7 238 75.6
Eucgr.G03358 Eucalyptus grandis HOM05D003119 ORTHO05D003559 1.7e-106 389.8 216 79.2
unitig_61.g26361 Utricularia gibba HOM05D003119 ORTHO05D003559 4.4e-99 365.2 239 71.1
Lj9C454T4 Lonicera japonica HOM05D003119 ORTHO05D003559 6.5e-95 351.3 247 66.0
Peaxi162Scf00694g00125 Petunia axillaris HOM05D003119 ORTHO05D003559 1.1e-94 350.5 234 69.2
Aa31sc576G10 Aethionema arabicum HOM05D003119 ORTHO05D003559 1.2e-93 347.1 269 61.7
FAN08G2581 Fragaria x ananassa HOM05D003119 ORTHO05D003559 8.8e-92 340.9 254 61.4
FAN01G1325 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.4e-89 332.8 273 58.2
AUR62023087 Chenopodium quinoa HOM05D003119 ORTHO05D003559 4.1e-89 332.0 249 61.0
MELO3C017123.2 Cucumis melo HOM05D003119 ORTHO05D003559 5.4e-89 331.6 276 55.4
AUR62029809 Chenopodium quinoa HOM05D003119 ORTHO05D003559 2.1e-85 319.7 270 57.0
Cpa.g.sc35.44 Carica papaya HOM05D003119 ORTHO05D003559 4.9e-82 308.5 193 71.0
Prupe.2G020300 Prunus persica HOM05D003119 ORTHO05D003559 1.4e-81 307.0 162 84.0
Haze_07437 Corylus avellana HOM05D003119 ORTHO05D003559 3.1e-81 305.8 205 68.8
Migut.D01907 Erythranthe guttata HOM05D003119 ORTHO05D003559 9.2e-81 304.3 176 75.0
Gohir.D08G163800 Gossypium hirsutum HOM05D003119 ORTHO05D003559 1.1e-78 297.4 162 81.5
arahy.Tifrunner.gnm1.ann1.MYUF54 Arachis hypogaea HOM05D003119 ORTHO05D003559 3.4e-75 285.8 172 72.1
HanXRQChr09g0271861 Helianthus annuus HOM05D003119 ORTHO05D003559 7.5e-75 284.6 162 74.1
DCAR_003225 Daucus carota HOM05D003119 ORTHO05D003559 1.6e-72 276.9 140 85.7
MELO3C023569.2 Cucumis melo HOM05D003119 ORTHO05D003559 1.6e-69 266.9 143 80.4
Phvul.009G182100 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 1.8e-68 263.5 161 73.3
DCAR_026104 Daucus carota HOM05D003119 ORTHO05D003559 4.9e-66 255.4 143 75.5
MBI17_g12872_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 3.2e-57 226.1 119 82.4
MD07G1018700 Malus domestica HOM05D003119 ORTHO05D003559 4.6e-56 222.2 111 84.7
Os04g0650900 Oryza sativa ssp. japonica HOM05D003119 ORTHO05D003559 4.6e-56 222.2 127 75.6
Nitab4.5_0000707g0180 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.9e-54 216.9 111 83.8
COL.COLO4_21430 Corchorus olitorius HOM05D003119 ORTHO05D003559 8.4e-50 201.4 110 74.5
MCO16G065 Micromonas commoda HOM05D003119 ORTHO05D003559 7.1e-49 198.4 204 45.6
HPP92_012079 Vanilla planifolia HOM05D003119 ORTHO05D003559 1.2e-45 187.6 108 75.0
HPP92_012081 Vanilla planifolia HOM05D003119 ORTHO05D003559 1.2e-45 187.6 106 77.4
Solyc03g113840.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 1.1e-41 174.5 105 73.3
Psat1g147240 Pisum sativum HOM05D003119 ORTHO05D003559 3.3e-38 162.9 231 37.2
QL04p008931 Quercus lobata HOM05D003119 ORTHO05D003559 9.0e-36 154.8 95 71.6
TPR.G228 Trifolium pratense HOM05D003119 ORTHO05D003559 1.3e-29 134.4 70 82.9
Nitab4.5_0000707g0160 Nicotiana tabacum HOM05D003119 ORTHO05D003559 3.6e-29 132.9 71 81.7
Actinidia33038 Actinidia chinensis HOM05D003119 ORTHO05D003559 1.1e-28 131.3 84 70.2
Cpa.g.sc35.41 Carica papaya HOM05D003119 ORTHO05D003559 4.0e-20 102.8 71 60.6
BcaC04g24265 Brassica carinata HOM05D003119 ORTHO05D003559 2.1e-16 90.5 56 64.3
Eucgr.J01382 Eucalyptus grandis HOM05D003119 ORTHO05D003559 5.1e-15 85.9 70 57.1
MD02G1306300 Malus domestica HOM05D003119 ORTHO05D003559 1.4e-12 77.8 39 74.4
Hma1.2p1_0002F.1_g002830 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 2.4e-12 77.0 44 68.2
arahy.Tifrunner.gnm1.ann1.P53GXH Arachis hypogaea HOM05D003119 ORTHO05D003559 2.6e-11 73.6 73 45.2
QL04p009277 Quercus lobata HOM05D003119 ORTHO05D003559 1.5e-06 57.8 36 55.6


User provided reference genes

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