Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 2134.0 1091 100.0
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1676.8 1094 77.1
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1673.3 1074 80.2
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1651.7 1085 76.5
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1646.3 1077 77.0
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1640.9 1092 74.4
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1639.8 1097 74.4
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1637.1 1112 74.9
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1635.5 1093 76.4
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1630.9 1083 76.5
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1630.5 1091 75.2
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1629.4 1089 76.9
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1622.8 1089 76.1
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1621.7 1092 75.4
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1614.7 1092 76.1
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1612.4 1094 73.9
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1610.9 1082 74.9
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1604.7 1090 73.8
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1604.7 1092 74.9
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1592.4 1081 75.5
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1587.8 1091 74.5
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1584.3 1089 73.7
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1583.9 1090 73.0
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1583.5 1090 72.9
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1582.8 1080 73.9
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1582.0 1098 73.8
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1582.0 1080 73.9
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1581.2 1091 73.8
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1579.7 1091 74.1
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1577.0 1084 72.0
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1574.3 1083 74.1
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1568.5 1112 70.8
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1567.0 1094 71.9
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1563.9 1086 71.6
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1561.2 1091 73.6
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1558.1 1086 71.5
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1557.3 1086 71.8
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1556.6 1084 71.7
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1555.4 1087 73.8
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1553.1 1088 71.9
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1552.3 1091 72.9
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1548.5 1085 72.4
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1548.5 1086 71.5
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1547.3 1088 73.5
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1547.3 1091 70.9
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1545.4 1084 72.7
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1544.6 1082 73.8
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1542.7 1086 73.1
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1541.2 1080 72.3
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1540.4 1082 72.4
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1540.0 1077 72.1
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1539.2 1083 71.4
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1538.9 1088 70.2
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1535.8 1083 73.0
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1534.2 1086 72.8
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1533.5 1079 72.8
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1532.3 1092 71.0
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1531.9 1088 72.7
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1531.9 1083 71.7
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1531.2 1086 73.0
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1530.4 1091 71.3
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1528.8 1097 71.4
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1525.8 1086 70.4
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1524.2 1080 71.7
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1523.8 1080 71.8
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1523.1 1119 69.2
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1523.1 1092 72.3
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1522.3 1080 71.7
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1520.4 1087 72.6
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1516.9 1098 70.7
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1515.4 1078 73.0
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1514.6 1079 72.4
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1509.2 1091 72.7
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1507.7 1092 71.0
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1501.1 1096 69.7
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1497.6 1096 69.3
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1494.2 1092 70.8
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1489.9 1083 71.8
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1489.6 1212 65.3
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1487.2 1079 71.3
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1477.2 1085 69.6
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1441.8 991 74.6
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1420.6 1140 65.4
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1418.3 1089 69.8
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1407.1 1093 67.5
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1395.6 1091 65.5
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1375.1 949 73.7
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1320.8 1088 62.4
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1308.9 963 69.9
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1302.0 1085 61.7
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1293.1 1203 57.2
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1223.8 1088 62.2
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1211.8 980 66.8
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1210.7 1080 58.3
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1181.0 761 76.6
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1153.3 759 75.1
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1106.7 756 74.1
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1079.3 720 75.8
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 1.5e-286 989.9 1021 58.1
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 6.3e-277 958.0 1085 48.2
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 1.0e-266 924.1 1079 47.7
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 3.3e-249 865.9 627 71.1
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 2.5e-233 813.1 713 59.9
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 7.3e-225 785.0 540 73.1
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 5.4e-220 768.8 1027 43.1
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 2.1e-192 677.2 526 66.2
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 2.4e-191 673.7 657 56.0
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 7.9e-187 658.7 1526 32.6
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 4.1e-175 619.8 405 77.5
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 4.1e-127 460.3 344 69.2
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 2.4e-87 328.2 201 79.1
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 3.8e-56 224.6 164 68.9
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 8.2e-43 180.3 101 87.1
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 5.0e-24 117.9 59 88.1
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 2.6e-20 105.5 54 87.0
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 6.6e-16 90.9 65 61.5
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.7e-11 75.1 43 74.4
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.7e-11 75.1 43 74.4
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 3.2e-10 72.0 79 49.4
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 7.0e-10 70.9 79 48.1
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 9.2e-10 70.5 526 21.3
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.2e-09 70.1 40 75.0


User provided reference genes

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