Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C450G3 Lonicera japonica HOM05D000320 ORTHO05D026413 6.5e-87 323.9 154 100.0
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 2.1e-37 159.5 144 55.6
Dinv41424 Davidia involucrata HOM05D000320 ORTHO05D000532 6.2e-37 157.9 143 55.2
Dinv43186 Davidia involucrata HOM05D000320 ORTHO05D000532 7.6e-35 151.0 124 58.9
vmacro06106 Vaccinium macrocarpon HOM05D000320 ORTHO05D000532 2.9e-34 149.1 143 55.2
vmacro23408 Vaccinium macrocarpon HOM05D000320 ORTHO05D000532 2.9e-34 149.1 143 55.2
Actinidia26350 Actinidia chinensis HOM05D000320 ORTHO05D000532 4.1e-33 145.2 143 52.4
CSS0041379 Camellia sinensis var. sinensis HOM05D000320 ORTHO05D000532 5.4e-33 144.8 133 54.9
Actinidia38698 Actinidia chinensis HOM05D000320 ORTHO05D026413 1.9e-30 136.3 140 50.0
CSS0045374 Camellia sinensis var. sinensis HOM05D000320 ORTHO05D000532 4.7e-29 131.7 123 53.7
Nitab4.5_0001021g0110 Nicotiana tabacum HOM05D000320 ORTHO05D000532 6.2e-29 131.3 158 47.5
Nitab4.5_0011752g0020 Nicotiana tabacum HOM05D000320 ORTHO05D000532 4.0e-28 128.6 158 47.5
DCAR_014924 Daucus carota HOM05D000320 ORTHO05D000532 3.4e-27 125.6 158 44.3
Lj9C707G8 Lonicera japonica HOM05D000320 ORTHO05D000532 1.3e-26 123.6 123 53.7
GSVIVG01012894001 Vitis vinifera HOM05D000320 ORTHO05D000532 3.8e-26 122.1 126 50.8
Sopen07g003190 Solanum pennellii HOM05D000320 ORTHO05D000532 1.9e-25 119.8 151 46.4
Nn8g39715 Nelumbo nucifera HOM05D000320 ORTHO05D000532 3.2e-25 119.0 147 47.6
Solyc07g007140.3 Solanum lycopersicum HOM05D000320 ORTHO05D000532 4.2e-25 118.6 151 46.4
Peaxi162Scf00391g00008 Petunia axillaris HOM05D000320 ORTHO05D000532 2.3e-23 112.8 157 45.9
DCAR_008868 Daucus carota HOM05D000320 ORTHO05D000532 5.1e-23 111.7 164 42.7
Duzib150G1260 Durio zibethinus HOM05D000320 ORTHO05D000532 5.1e-23 111.7 227 33.5
Prupe.7G254900 Prunus persica HOM05D000320 ORTHO05D000532 2.5e-22 109.4 123 50.4
Oeu040791.1 Olea europaea HOM05D000320 ORTHO05D000532 2.1e-21 106.3 145 42.1
CAN.G518.21 Capsicum annuum HOM05D000320 ORTHO05D000532 1.1e-20 104.0 153 43.1
Haze_19320 Corylus avellana HOM05D000320 ORTHO05D000532 1.1e-20 104.0 125 48.8
CiPaw.15G181800 Carya illinoinensis HOM05D000320 ORTHO05D000532 1.4e-20 103.6 128 48.4
Nn2g12245 Nelumbo nucifera HOM05D000320 ORTHO05D000532 1.8e-20 103.2 144 44.4
Cpa.g.sc46.87 Carica papaya HOM05D000320 ORTHO05D000532 5.3e-20 101.7 196 37.8
CANSAT11G0220 Cannabis sativa HOM05D000320 ORTHO05D000532 1.5e-19 100.1 225 31.6
QL02p091263 Quercus lobata HOM05D000320 ORTHO05D000532 1.5e-19 100.1 127 43.3
MSTRG.26317 Avicennia marina HOM05D000320 ORTHO05D000532 3.4e-19 99.0 147 41.5
Ciclev10007243m.g Citrus clementina HOM05D000320 ORTHO05D000532 3.4e-19 99.0 203 34.5
COL.COLO4_24103 Corchorus olitorius HOM05D000320 ORTHO05D000532 1.3e-18 97.1 139 43.2
Sed0011317 Sechium edule HOM05D000320 ORTHO05D000532 2.9e-18 95.9 220 35.0
Duzib168G1261 Durio zibethinus HOM05D000320 ORTHO05D000532 3.8e-18 95.5 130 43.8
Ah.14g078750 Amaranthus hybridus HOM05D000320 ORTHO05D000532 4.9e-18 95.1 157 40.1
Sc08g0005800 Simmondsia chinensis HOM05D000320 ORTHO05D000532 6.4e-18 94.7 147 40.1
Gohir.A05G011400 Gossypium hirsutum HOM05D000320 ORTHO05D000532 1.1e-17 94.0 132 37.9
THA.LOC104815396 Tarenaya hassleriana HOM05D000320 ORTHO05D000532 1.1e-17 94.0 194 33.5
MD02G1013000 Malus domestica HOM05D000320 ORTHO05D000532 1.4e-17 93.6 129 46.5
Oeu051704.2 Olea europaea HOM05D000320 ORTHO05D000532 3.2e-17 92.4 143 42.0
Gohir.D05G012100 Gossypium hirsutum HOM05D000320 ORTHO05D000532 7.1e-17 91.3 132 37.1
HanXRQChr05g0137961 Helianthus annuus HOM05D000320 ORTHO05D000532 1.2e-16 90.5 159 34.0
Sabra18G0097200 Salix brachista HOM05D000320 ORTHO05D000532 2.1e-16 89.7 197 33.0
Gorai.009G012400 Gossypium raimondii HOM05D000320 ORTHO05D000532 2.7e-16 89.4 132 36.4
Potri.018G114300 Populus trichocarpa HOM05D000320 ORTHO05D000532 2.7e-16 89.4 198 32.3
Thecc.09G141700 Theobroma cacao HOM05D000320 ORTHO05D000532 3.5e-16 89.0 140 43.6
EL10Ac8g18817 Beta vulgaris HOM05D000320 ORTHO05D000532 4.6e-16 88.6 174 34.5
AUR62041450 Chenopodium quinoa HOM05D000320 ORTHO05D000532 7.9e-16 87.8 166 38.0
Duzib187G0875 Durio zibethinus HOM05D000320 ORTHO05D000532 7.9e-16 87.8 136 39.0
MD15G1159900 Malus domestica HOM05D000320 ORTHO05D000532 1.0e-15 87.4 126 46.0
TWI34G0451 Tripterygium wilfordii HOM05D000320 ORTHO05D000532 1.3e-15 87.0 192 33.9
Manes.14G138500 Manihot esculenta HOM05D000320 ORTHO05D000532 3.9e-15 85.5 197 31.5
RcHm_v2.0_Chr2g0086681 Rosa chinensis HOM05D000320 ORTHO05D000532 3.9e-15 85.5 143 38.5
Hund21607 Selenicereus undatus HOM05D000320 ORTHO05D000532 3.9e-15 85.5 167 36.5
FAN23G0389 Fragaria x ananassa HOM05D000320 ORTHO05D000532 5.1e-15 85.1 122 42.6
FAN26G1582 Fragaria x ananassa HOM05D000320 ORTHO05D000532 6.6e-15 84.7 122 41.8
Sabra06G0146100 Salix brachista HOM05D000320 ORTHO05D000532 8.7e-15 84.3 203 31.5
ClCG06G012040 Citrullus lanatus HOM05D000320 ORTHO05D000532 2.5e-14 82.8 219 30.6
Dinv42914 Davidia involucrata HOM05D000320 ORTHO05D000532 1.6e-13 80.1 58 63.8
Atru.chr7.262 Acer truncatum HOM05D000320 ORTHO05D000532 2.1e-13 79.7 219 29.7
Potri.006G190200 Populus trichocarpa HOM05D000320 ORTHO05D000532 6.2e-13 78.2 203 29.1
MELO3C010263.2 Cucumis melo HOM05D000320 ORTHO05D000532 8.1e-13 77.8 217 30.0
Lsat_1_v5_gn_8_63140 Lactuca sativa HOM05D000320 ORTHO05D000532 1.4e-12 77.0 158 33.5
SGA_v2.0_scaffold183G39868 Striga asiatica HOM05D000320 ORTHO05D000532 2.4e-12 76.3 164 35.4
Migut.K00378 Erythranthe guttata HOM05D000320 ORTHO05D000532 3.1e-12 75.9 151 34.4
FvH4_1g01730 Fragaria vesca HOM05D000320 ORTHO05D000532 3.1e-12 75.9 122 41.8
FAN19G1966 Fragaria x ananassa HOM05D000320 ORTHO05D000532 3.1e-12 75.9 122 41.8
Cc00_g14930 Coffea canephora HOM05D000320 ORTHO05D000532 4.0e-12 75.5 139 36.7
Migut.I00588 Erythranthe guttata HOM05D000320 ORTHO05D026413 5.3e-12 75.1 151 34.4
Cfa020892 Carpinus fangiana HOM05D000320 ORTHO05D000532 9.0e-12 74.3 105 41.9
Eucgr.C00436 Eucalyptus grandis HOM05D000320 ORTHO05D000532 4.5e-11 72.0 125 37.6
Aa31sc130G40 Aethionema arabicum HOM05D000320 ORTHO05D000532 5.8e-11 71.6 175 32.0
PSO017G5451 Papaver somniferum HOM05D000320 ORTHO05D000532 5.8e-11 71.6 150 33.3
FAN28G2483 Fragaria x ananassa HOM05D000320 ORTHO05D000532 7.6e-11 71.2 123 40.7
Gohir.D06G049400 Gossypium hirsutum HOM05D000320 ORTHO05D000532 9.9e-11 70.9 136 36.0
Gorai.010G056300 Gossypium raimondii HOM05D000320 ORTHO05D000532 4.9e-10 68.6 137 35.8
CsaV3_1G028500 Cucumis sativus L. HOM05D000320 ORTHO05D000532 6.4e-10 68.2 217 28.1
Psat4g033080 Pisum sativum HOM05D000320 ORTHO05D000532 1.1e-09 67.4 158 31.6
Lsat_1_v5_gn_6_84140 Lactuca sativa HOM05D000320 ORTHO05D026413 1.9e-09 66.6 158 31.0
unitig_72.g29746 Utricularia gibba HOM05D000320 ORTHO05D019108 9.3e-09 64.3 131 37.4
AUR62011256 Chenopodium quinoa HOM05D000320 ORTHO05D000532 3.5e-08 62.4 113 38.1
Ca_27063_v3 Cicer arietinum L. HOM05D000320 ORTHO05D000532 1.8e-07 60.1 192 30.7
Ca_29981_v3 Cicer arietinum L. HOM05D000320 ORTHO05D000532 1.8e-07 60.1 192 30.7
VMungo1215G2781 Vigna mungo HOM05D000320 ORTHO05D000532 2.3e-07 59.7 156 33.3
Ca_21614_v3 Cicer arietinum L. HOM05D000320 ORTHO05D000532 3.9e-07 58.9 156 34.0
arahy.Tifrunner.gnm1.ann1.EDM9PE Arachis hypogaea HOM05D000320 ORTHO05D000532 5.1e-07 58.5 122 36.9
Phvul.003G174700 Phaseolus vulgaris HOM05D000320 ORTHO05D000532 5.1e-07 58.5 171 33.3
arahy.Tifrunner.gnm1.ann1.D0IPBT Arachis hypogaea HOM05D000320 ORTHO05D000532 6.7e-07 58.2 132 33.3
Lj4g0019744 Lotus japonicus HOM05D000320 ORTHO05D000532 8.7e-07 57.8 156 31.4
TPR.G15811 Trifolium pratense HOM05D000320 ORTHO05D000532 2.5e-06 56.2 161 30.4
Migut.K01258 Erythranthe guttata HOM05D000320 ORTHO05D019108 5.6e-06 55.1 148 31.1


User provided reference genes

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