Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 0.0e+00 1867.8 959 100.0
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 2.8e-244 849.4 955 53.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.2e-239 833.9 988 51.0
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.7e-231 806.2 1016 48.5
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.7e-230 803.5 927 51.7
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.3e-229 798.1 1000 49.7
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 2.1e-228 796.6 981 49.5
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.6e-226 789.6 1022 47.6
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 5.8e-226 788.5 1022 47.7
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 4.6e-223 778.9 1011 46.9
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 2.3e-222 776.5 1011 46.9
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 3.0e-222 776.2 1011 46.8
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 6.2e-220 768.5 999 48.6
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 8.1e-220 768.1 995 47.9
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 4.9e-217 758.8 1009 47.2
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.1e-216 757.7 978 48.0
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.6e-215 753.8 925 49.9
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.3e-214 750.0 997 46.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.4e-213 745.0 1006 46.6
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 9.6e-213 744.6 1007 46.4
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.3e-212 744.2 845 52.4
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.8e-212 742.3 1011 46.0
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.1e-211 741.1 1003 45.6
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.0e-210 736.9 1010 46.6
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 6.5e-209 731.9 912 49.7
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 5.5e-208 728.8 1026 46.9
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.1e-208 728.4 1010 46.2
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 2.1e-207 726.9 964 47.1
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 3.5e-207 726.1 967 46.9
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 1.8e-206 723.8 1000 45.9
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 2.3e-206 723.4 939 48.9
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 2.3e-206 723.4 943 48.0
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 5.7e-205 718.8 995 46.2
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.7e-205 718.8 952 47.2
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 9.6e-205 718.0 1010 46.1
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 1.3e-204 717.6 922 48.0
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 2.8e-204 716.5 1015 46.5
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 6.3e-204 715.3 935 48.2
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 5.3e-203 712.2 1015 44.1
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 5.0e-201 705.7 1007 45.0
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 6.5e-201 705.3 1007 44.7
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 8.4e-201 704.9 946 46.8
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.5e-200 703.4 916 47.8
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.2e-200 702.6 982 46.1
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 7.2e-200 701.8 1012 44.0
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 1.6e-199 700.7 965 46.7
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.7e-199 699.9 1007 44.1
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 3.5e-199 699.5 982 46.3
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 7.9e-199 698.4 1015 43.2
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 1.0e-198 698.0 1008 43.4
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.3e-198 697.6 1010 44.0
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 2.3e-198 696.8 1008 43.3
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 5.1e-198 695.7 963 46.0
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 4.3e-197 692.6 954 45.1
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 5.7e-197 692.2 1015 43.3
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 7.4e-197 691.8 748 54.4
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 3.7e-196 689.5 943 45.7
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 3.7e-196 689.5 952 45.6
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 4.8e-196 689.1 942 46.4
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 8.2e-196 688.3 924 45.7
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-195 688.0 915 45.5
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 2.4e-195 686.8 1014 43.3
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 1.5e-194 684.1 957 46.4
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 4.5e-194 682.6 925 44.9
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 7.7e-194 681.8 1010 43.5
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.9e-192 677.2 994 43.5
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 5.5e-192 675.6 922 46.7
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.5e-192 675.6 955 45.2
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 7.2e-192 675.2 906 47.0
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 7.2e-192 675.2 931 44.3
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 2.7e-191 673.3 787 51.8
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.0e-190 671.4 918 46.0
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.8e-190 670.6 995 43.5
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 3.9e-190 669.5 991 42.6
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 9.7e-189 664.8 970 44.7
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 1.3e-188 664.5 907 45.6
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 2.2e-188 663.7 947 43.7
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 2.8e-188 663.3 1011 41.8
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 3.7e-188 662.9 1000 42.2
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 6.3e-188 662.1 914 46.1
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.5e-186 657.5 996 43.1
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 4.5e-186 656.0 990 42.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 5.9e-186 655.6 945 45.0
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.9e-184 650.6 907 45.6
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 4.2e-184 649.4 950 44.1
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 5.5e-184 649.0 923 44.5
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.2e-183 647.9 930 44.5
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.6e-183 647.5 1013 41.5
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.6e-183 646.4 930 44.3
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 7.9e-183 645.2 915 45.0
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 3.0e-182 643.3 888 46.7
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 8.8e-182 641.7 930 44.3
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.5e-181 641.0 928 44.1
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.5e-181 641.0 935 44.3
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.6e-178 630.2 641 56.2
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 7.7e-178 628.6 1004 42.0
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 8.5e-177 625.2 643 56.0
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.5e-176 624.4 910 43.5
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 1.2e-175 621.3 801 48.2
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 3.6e-175 619.8 928 43.5
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 6.3e-172 609.0 1010 40.3
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 4.1e-171 606.3 938 42.0
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 2.0e-170 604.0 921 43.5
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 3.5e-170 603.2 900 42.9
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.5e-168 597.8 882 43.3
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.3e-166 590.5 756 48.1
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 8.8e-166 588.6 613 55.3
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.2e-162 578.2 595 54.5
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 5.9e-162 575.9 638 52.4
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 7.7e-162 575.5 651 52.5
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.6e-159 566.6 648 49.8
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 2.0e-157 560.8 912 41.2
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 3.1e-155 553.5 910 41.0
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 9.2e-155 552.0 829 43.9
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.0e-153 548.5 869 41.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.3e-153 548.1 913 39.4
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 2.9e-153 547.0 875 40.9
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.9e-153 547.0 1011 38.3
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 3.8e-153 546.6 906 40.3
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 5.0e-153 546.2 874 41.1
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 2.8e-151 540.4 874 41.0
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.6e-151 540.0 653 49.2
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 8.0e-151 538.9 992 39.0
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 2.3e-150 537.3 1010 37.5
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.5e-149 534.6 946 40.5
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.7e-148 531.2 650 49.2
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.9e-148 530.4 907 39.3
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 9.2e-147 525.4 935 39.6
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 4.3e-144 516.5 906 38.9
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 5.6e-144 516.2 895 38.9
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.4e-142 511.5 890 38.3
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 3.5e-138 496.9 906 38.2
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.1e-136 491.9 1024 35.3
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 8.3e-132 475.7 911 36.2
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 2.7e-130 470.7 792 43.4
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.2e-125 455.3 906 34.0
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 3.2e-123 447.2 951 34.6
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-110 405.2 632 40.3
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 1.5e-109 401.7 874 35.0
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 4.8e-103 380.2 876 33.4
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.9e-100 370.9 912 32.8
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.4e-99 368.6 791 37.8
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 3.5e-98 364.0 655 39.7
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 5.1e-97 360.1 660 38.2
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 3.3e-96 357.5 615 39.7
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.6e-96 356.7 412 51.7
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 1.5e-93 348.6 464 45.9
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 5.8e-93 346.7 905 30.9
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 2.5e-88 331.3 822 33.5
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.7e-68 265.4 515 38.4
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 6.1e-58 230.3 668 29.0
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 1.1e-54 219.5 494 35.0
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 7.2e-43 180.3 121 69.4
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.2e-42 179.5 339 38.3
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.2e-40 172.9 192 48.4
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.5e-35 156.0 294 33.3
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.2e-30 138.3 239 38.5
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 2.0e-29 135.6 237 38.8
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 1.3e-28 132.9 116 62.9
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 3.3e-27 128.3 230 36.5
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 9.8e-24 116.7 192 38.5
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 1.3e-23 116.3 192 39.6
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 2.9e-23 115.2 192 38.5
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.1e-22 113.2 244 29.9
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.0e-20 106.7 389 28.3
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.7e-20 105.9 205 35.1
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.6e-20 104.0 117 47.9
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-18 99.8 155 43.9
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.8e-17 95.9 120 43.3
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 2.6e-16 92.0 107 53.3
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 4.4e-16 91.3 73 63.0
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.2e-14 85.1 177 36.2
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 2.1e-13 82.4 50 74.0
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 8.6e-12 77.0 149 34.2
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.5e-11 76.3 185 34.1
Oeu055964.1 Olea europaea HOM05D001574 ORTHO05D000708 7.3e-11 73.9 49 71.4
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.4e-09 69.7 145 36.6
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.8e-09 69.3 52 61.5
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 3.8e-07 61.6 55 58.2
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.4e-06 59.7 45 62.2
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-06 59.7 209 31.6


User provided reference genes

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