Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C349T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-56 222.2 112 100.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-52 209.5 111 92.8
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-52 207.6 111 91.9
Lj7C368T6 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-51 204.1 111 90.1
Lj2C883T0 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-48 194.9 111 87.4
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-40 169.5 91 89.0
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-40 168.3 91 87.9
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-40 167.9 91 89.0
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-30 135.6 103 60.2
Lj9C53T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-28 129.8 111 55.0
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 3.2e-27 125.2 110 50.0
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-27 123.6 71 83.1
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-26 122.5 104 52.9
Lj4A452T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-26 122.5 111 48.6
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-26 121.3 118 50.8
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-26 121.3 104 52.9
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-26 121.3 118 50.8
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-25 120.2 111 48.6
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-25 118.6 109 48.6
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-25 117.5 103 50.5
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.8e-25 117.1 104 51.0
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 8.8e-25 117.1 104 50.0
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 2.0e-24 115.9 71 78.9
Lj4A52T44 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-24 114.0 99 50.5
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-23 113.2 107 49.5
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-23 112.8 96 52.1
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-23 112.5 95 51.6
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-23 112.1 103 53.4
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-22 109.0 111 51.4
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-22 107.1 89 52.8
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-21 105.9 101 46.5
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-21 104.4 96 50.0
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-20 102.4 104 48.1
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-19 99.4 111 42.3
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-19 97.8 111 41.4
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-19 97.4 111 41.4
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-18 96.3 111 41.4
Lj1A171T29 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-18 95.9 100 45.0
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-18 94.4 84 50.0
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 2.3e-17 92.4 70 64.3
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-17 90.9 91 45.1
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-16 90.1 95 45.3
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 9.7e-16 87.0 75 49.3
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-15 86.3 70 62.9
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-15 86.3 91 42.9
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-15 86.3 76 55.3
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-15 85.9 91 42.9
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-15 85.5 70 48.6
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-14 83.2 91 42.9
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-14 81.3 82 45.1
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-13 80.1 93 46.2
Lj1E569T0 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-13 77.8 69 46.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-13 77.8 71 46.5
Lj6C556T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-11 72.4 84 44.0
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-11 71.2 73 47.9
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-10 68.2 60 48.3
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-09 67.0 111 36.9
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-09 64.3 49 61.2
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-08 63.2 63 42.9
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-07 59.7 59 44.1
Lj4C483T6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-07 58.2 66 39.4
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 8.3e-07 57.4 69 36.2
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 8.3e-07 57.4 69 36.2
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.0 66 39.4
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.0 59 42.4
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.0 66 39.4
Lju170A10G17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-06 56.2 59 40.7
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-06 55.8 59 40.7
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 2.4e-06 55.8 69 36.2
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 4.1e-06 55.1 69 34.8
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 7.0e-06 54.3 59 40.7


User provided reference genes

Program Settings