Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C282T17 Lonicera japonica HOM05D005987 ORTHO05D007233 2.3e-87 325.5 160 100.0
Lj5A126G85 Lonicera japonica HOM05D005987 ORTHO05D007233 1.7e-45 186.4 109 78.9
Sc12g0005210 Simmondsia chinensis HOM05D005987 ORTHO05D007233 4.0e-39 165.2 173 52.6
Dinv38561 Davidia involucrata HOM05D005987 ORTHO05D007233 2.0e-38 162.9 108 70.4
QL10p008901 Quercus lobata HOM05D005987 ORTHO05D007233 2.0e-38 162.9 173 53.8
RcHm_v2.0_Chr7g0193121 Rosa chinensis HOM05D005987 ORTHO05D007233 2.6e-38 162.5 108 69.4
CiPaw.12G028700 Carya illinoinensis HOM05D005987 ORTHO05D007233 3.4e-38 162.2 108 68.5
vmacro16628 Vaccinium macrocarpon HOM05D005987 ORTHO05D007233 7.6e-38 161.0 173 52.0
GSVIVG01007695001 Vitis vinifera HOM05D005987 ORTHO05D007233 7.6e-38 161.0 109 69.7
TAR629G2107 Trochodendron aralioides HOM05D005987 ORTHO05D007233 9.9e-38 160.6 109 68.8
arahy.Tifrunner.gnm1.ann1.T968NY Arachis hypogaea HOM05D005987 ORTHO05D007233 1.3e-37 160.2 111 64.9
FvH4_5g05710 Fragaria vesca HOM05D005987 ORTHO05D007233 1.3e-37 160.2 107 69.2
FAN08G2261 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.3e-37 160.2 107 69.2
FAN04G3269 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.7e-37 159.8 107 69.2
TWI14G0473 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 1.7e-37 159.8 108 67.6
FAN13G1898 Fragaria x ananassa HOM05D005987 ORTHO05D007233 2.9e-37 159.1 107 68.2
arahy.Tifrunner.gnm1.ann1.9L10M3 Arachis hypogaea HOM05D005987 ORTHO05D007233 4.9e-37 158.3 111 64.0
Medtr4g105460 Medicago truncatula HOM05D005987 ORTHO05D007233 4.9e-37 158.3 109 66.1
Dinv20627 Davidia involucrata HOM05D005987 ORTHO05D007233 6.4e-37 157.9 108 69.4
FAN18G2319 Fragaria x ananassa HOM05D005987 ORTHO05D007233 6.4e-37 157.9 107 67.3
Nitab4.5_0001207g0020 Nicotiana tabacum HOM05D001815 ORTHO05D007233 8.4e-37 157.5 108 65.7
Solyc03g112640.3 Solanum lycopersicum HOM05D005987 ORTHO05D007233 8.4e-37 157.5 108 67.6
Thecc.03G019200 Theobroma cacao HOM05D005987 ORTHO05D007233 8.4e-37 157.5 109 67.0
arahy.Tifrunner.gnm1.ann1.2X5BV9 Arachis hypogaea HOM05D005987 ORTHO05D007233 1.1e-36 157.1 113 62.8
TPR.G37573 Trifolium pratense HOM05D005987 ORTHO05D007233 1.4e-36 156.8 109 65.1
Ca_21942_v3 Cicer arietinum L. HOM05D005987 ORTHO05D007233 1.9e-36 156.4 109 65.1
Rhsim12G0166400 Rhododendron simsii HOM05D005987 ORTHO05D007233 1.9e-36 156.4 107 68.2
Sopen03g031720 Solanum pennellii HOM05D005987 ORTHO05D007233 1.9e-36 156.4 108 67.6
Cfa019170 Carpinus fangiana HOM05D005987 ORTHO05D007233 3.2e-36 155.6 108 66.7
MD14G1176400 Malus domestica HOM05D005987 ORTHO05D007233 3.2e-36 155.6 108 65.7
VMungo1215G1113 Vigna mungo HOM05D005987 ORTHO05D007233 3.2e-36 155.6 109 63.3
CSS0034112 Camellia sinensis var. sinensis HOM05D005987 ORTHO05D007233 4.2e-36 155.2 108 65.7
Lalb_Chr12g0201721 Lupinus albus HOM05D005987 ORTHO05D007233 4.2e-36 155.2 109 64.2
MD06G1170600 Malus domestica HOM05D005987 ORTHO05D007233 4.2e-36 155.2 108 65.7
SalBow5G4110 Salvia bowleyana HOM05D005987 ORTHO05D007233 4.2e-36 155.2 108 64.8
Actinidia19114 Actinidia chinensis HOM05D005987 ORTHO05D007233 5.4e-36 154.8 148 54.1
MSTRG.9684 Avicennia marina HOM05D005987 ORTHO05D007233 5.4e-36 154.8 108 63.0
Ciclev10021762m.g Citrus clementina HOM05D005987 ORTHO05D007233 5.4e-36 154.8 109 67.9
Lj4g0021830 Lotus japonicus HOM05D005987 ORTHO05D007233 5.4e-36 154.8 109 65.1
PGSC0003DMG400018166 Solanum tuberosum HOM05D005987 ORTHO05D007233 5.4e-36 154.8 108 65.7
DCAR_016038 Daucus carota HOM05D005987 ORTHO05D007233 9.3e-36 154.1 165 50.9
Glyma.05G039500 Glycine max HOM05D005987 ORTHO05D007233 9.3e-36 154.1 109 63.3
Nn4g22674 Nelumbo nucifera HOM05D005987 ORTHO05D007233 9.3e-36 154.1 108 66.7
THA.LOC104798969 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 9.3e-36 154.1 109 66.1
MELO3C026282.2 Cucumis melo HOM05D005987 ORTHO05D007233 1.2e-35 153.7 108 64.8
CsaV3_1G001340 Cucumis sativus L. HOM05D005987 ORTHO05D007233 1.2e-35 153.7 108 64.8
Nitab4.5_0003229g0030 Nicotiana tabacum HOM05D005987 ORTHO05D007233 1.2e-35 153.7 108 64.8
Phvul.003G202500 Phaseolus vulgaris HOM05D002782 ORTHO05D007233 1.2e-35 153.7 109 62.4
SGA_v2.0_scaffold116G32224 Striga asiatica HOM05D005987 ORTHO05D007233 1.2e-35 153.7 106 67.0
Atru.chr9.2531 Acer truncatum HOM05D005987 ORTHO05D007233 1.6e-35 153.3 108 67.6
Migut.D01982 Erythranthe guttata HOM05D005987 ORTHO05D007233 1.6e-35 153.3 108 62.0
Glyma.17G087400 Glycine max HOM05D005987 ORTHO05D007233 2.1e-35 152.9 109 63.3
Medtr4g105450 Medicago truncatula HOM05D005987 ORTHO05D007233 3.5e-35 152.1 109 62.4
TPR.G37495 Trifolium pratense HOM05D005987 ORTHO05D007233 3.5e-35 152.1 108 63.0
Peaxi162Scf00089g01737 Petunia axillaris HOM05D005987 ORTHO05D007233 4.6e-35 151.8 107 66.4
TWI39G0642 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 4.6e-35 151.8 108 64.8
ClCG06G017140 Citrullus lanatus HOM05D005987 ORTHO05D007233 6.0e-35 151.4 108 63.9
Eucgr.B00245 Eucalyptus grandis HOM05D005987 ORTHO05D007233 6.0e-35 151.4 108 64.8
Gohir.D09G168300 Gossypium hirsutum HOM05D005987 ORTHO05D007233 6.0e-35 151.4 108 63.0
Gorai.006G189900 Gossypium raimondii HOM05D005987 ORTHO05D007233 6.0e-35 151.4 108 63.0
Sed0001492 Sechium edule HOM05D005987 ORTHO05D007233 6.0e-35 151.4 108 63.9
Sed0002182 Sechium edule HOM05D005987 ORTHO05D007233 6.0e-35 151.4 108 63.9
SGA_v2.0_scaffold90G27882 Striga asiatica HOM05D005987 ORTHO05D007233 6.0e-35 151.4 108 64.8
CDE06G0769 Ceratophyllum demersum HOM05D005987 ORTHO05D007233 7.8e-35 151.0 108 63.9
Cc04_g12360 Coffea canephora HOM05D005987 ORTHO05D007233 7.8e-35 151.0 109 63.3
PSO832G1443 Papaver somniferum HOM05D005987 ORTHO05D007233 7.8e-35 151.0 108 66.7
Oeu016421.1 Olea europaea HOM05D005987 ORTHO05D007233 1.0e-34 150.6 108 66.7
TAR371G0908 Trochodendron aralioides HOM05D005987 ORTHO05D007233 1.0e-34 150.6 108 64.8
CAN.G1166.26 Capsicum annuum HOM05D005987 ORTHO05D007233 1.3e-34 150.2 104 67.3
MBI16_g14601_MAGBIO Magnolia biondii HOM05D005987 ORTHO05D007233 1.7e-34 149.8 109 65.1
Psat4g058800 Pisum sativum HOM05D005987 ORTHO05D007233 1.7e-34 149.8 109 61.5
Haze_07547 Corylus avellana HOM05D005987 ORTHO05D007233 3.0e-34 149.1 108 65.7
Oeu024705.1 Olea europaea HOM05D005987 ORTHO05D007233 3.0e-34 149.1 108 63.9
unitig_0.g1431 Utricularia gibba HOM05D005987 ORTHO05D007233 3.0e-34 149.1 113 58.4
Atru.chr9.2528 Acer truncatum HOM05D005987 ORTHO05D007233 3.9e-34 148.7 108 64.8
BcaC04g23367 Brassica carinata HOM05D005987 ORTHO05D007233 5.1e-34 148.3 109 62.4
Potri.015G080100 Populus trichocarpa HOM05D005987 ORTHO05D007233 5.1e-34 148.3 109 65.1
Manes.14G063300 Manihot esculenta HOM05D005987 ORTHO05D007233 8.7e-34 147.5 108 62.0
Psat4g058760 Pisum sativum HOM05D005987 ORTHO05D007233 1.1e-33 147.1 109 62.4
Sp2g26190 Schrenkiella parvula HOM05D005987 ORTHO05D007233 1.1e-33 147.1 109 61.5
AT5G63060 Arabidopsis thaliana HOM05D005987 ORTHO05D007233 1.5e-33 146.7 109 60.6
AUR62008180 Chenopodium quinoa HOM05D005987 ORTHO05D007233 1.5e-33 146.7 109 64.2
Zm00001eb379250 Zea mays HOM05D005987 ORTHO05D007233 1.5e-33 146.7 108 61.1
Ah.02g110630 Amaranthus hybridus HOM05D005987 ORTHO05D007233 1.9e-33 146.4 173 48.0
MSTRG.4360 Avicennia marina HOM05D005987 ORTHO05D007233 2.5e-33 146.0 105 61.0
EL10Ac5g10704 Beta vulgaris HOM05D005987 ORTHO05D007233 2.5e-33 146.0 109 63.3
AUR62028761 Chenopodium quinoa HOM05D005987 ORTHO05D007233 2.5e-33 146.0 109 64.2
BcaB04g19948 Brassica carinata HOM05D005987 ORTHO05D007233 3.3e-33 145.6 109 60.6
Thhalv10004783m.g Eutrema salsugineum HOM05D005987 ORTHO05D007233 3.3e-33 145.6 109 61.5
PGR083G1581 Punica granatum HOM05D005987 ORTHO05D007233 3.3e-33 145.6 108 63.0
AL8G40080 Arabidopsis lyrata HOM05D005987 ORTHO05D007233 4.3e-33 145.2 109 59.6
Carub.0008s2377 Capsella rubella HOM05D005987 ORTHO05D007233 4.3e-33 145.2 109 59.6
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 4.3e-33 145.2 108 62.0
Ah.11g051440 Amaranthus hybridus HOM05D005987 ORTHO05D007233 5.6e-33 144.8 173 48.0
THA.LOC104821480 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 5.6e-33 144.8 108 63.0
Os02g0321500 Oryza sativa ssp. japonica HOM05D005987 ORTHO05D007233 9.6e-33 144.1 108 63.0
Hund09453 Selenicereus undatus HOM05D005987 ORTHO05D007233 1.3e-32 143.7 191 45.5
HanXRQChr03g0068941 Helianthus annuus HOM05D005987 ORTHO05D007233 2.1e-32 142.9 108 58.3
Lsat_1_v5_gn_7_54241 Lactuca sativa HOM05D005987 ORTHO05D007233 2.1e-32 142.9 108 59.3
CARHR276860 Cardamine hirsuta HOM05D005987 ORTHO05D007233 6.2e-32 141.4 109 58.7
HPP92_000317 Vanilla planifolia HOM05D005987 ORTHO05D007233 2.4e-31 139.4 106 59.4
A09p08010 Brassica napus HOM05D005987 ORTHO05D007233 4.0e-31 138.7 123 55.3
Aqoxy3G02835 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 9.0e-31 137.5 105 60.0
PSO782G2758 Papaver somniferum HOM05D005987 ORTHO05D007233 1.5e-30 136.7 100 66.0
Sabra15G0104300 Salix brachista HOM05D005987 ORTHO05D007233 2.0e-30 136.3 122 56.6
Aqoxy1G03751 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 2.6e-30 136.0 105 59.0
SEGI_07831 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 2.6e-30 136.0 109 56.9
SEGI_41325 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 2.6e-30 136.0 109 56.9
Aa31LG11G610 Aethionema arabicum HOM05D005987 ORTHO05D007233 7.6e-30 134.4 109 59.6
C09p09060 Brassica napus HOM05D005987 ORTHO05D007233 3.8e-29 132.1 109 58.7
BolC9t53819H Brassica oleracea HOM05D005987 ORTHO05D007233 3.8e-29 132.1 109 58.7
BraA09t36453Z Brassica rapa HOM05D005987 ORTHO05D007233 3.8e-29 132.1 109 58.7
ATR1152G043 Amborella trichopoda HOM05D005987 ORTHO05D007233 3.0e-26 122.5 103 52.4
FvH4_1g22320 Fragaria vesca HOM05D005987 ORTHO05D007233 1.9e-25 119.8 80 67.5
SalBow5G4086 Salvia bowleyana HOM05D005987 ORTHO05D007233 1.9e-25 119.8 80 66.2
CBR_g39624 Chara braunii HOM05D005987 ORTHO05D007233 1.6e-24 116.7 107 44.9
Pp3c16_21460 Physcomitrium patens HOM05D005987 ORTHO05D007233 2.1e-24 116.3 108 46.3
Gohir.A09G172600 Gossypium hirsutum HOM05D005987 ORTHO05D007233 4.0e-23 112.1 79 60.8
AagrBONN_evm.TU.Sc2ySwM_117.1082 Anthoceros agrestis HOM05D005987 ORTHO05D007233 1.5e-22 110.2 109 43.1
Mapoly0098s0038 Marchantia polymorpha HOM05D005987 ORTHO05D007233 2.2e-21 106.3 109 44.0
SMO270G0062 Selaginella moellendorffii HOM05D005987 ORTHO05D007233 2.2e-21 106.3 109 43.1
SGA_v2.0_scaffold116G32226 Striga asiatica HOM05D005987 ORTHO05D007233 1.1e-15 87.4 65 61.5
TPR.G35203 Trifolium pratense HOM05D001180 ORTHO05D001055 1.8e-07 60.1 101 33.7
MBI16_g31219_MAGBIO Magnolia biondii HOM05D001180 ORTHO05D001055 9.0e-07 57.8 103 32.0
MCO02G152 Micromonas commoda HOM05D005987 ORTHO05D007233 9.0e-07 57.8 100 28.0
Ca_15233_v3 Cicer arietinum L. HOM05D001180 ORTHO05D001055 1.2e-06 57.4 101 31.7
PRCOL_00004470 Prasinoderma coloniale HOM05D005987 ORTHO05D007233 2.6e-06 56.2 106 30.2
Migut.D01178 Erythranthe guttata HOM05D001471 ORTHO05D001325 5.9e-06 55.1 98 29.6
Psat5g136800 Pisum sativum HOM05D001180 ORTHO05D001055 5.9e-06 55.1 101 28.7
COL.COLO4_30106 Corchorus olitorius HOM05D005987 ORTHO05D007233 7.7e-06 54.7 32 68.8
Potri.012G088350 Populus trichocarpa HOM05D005987 ORTHO05D007233 1.0e-05 54.3 94 37.2


User provided reference genes

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