Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.9e-108 396.0 216 100.0
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.0e-101 373.6 216 97.2
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 4.4e-49 198.7 233 51.9
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 4.4e-49 198.7 237 54.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 9.9e-49 197.6 219 53.9
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 9.2e-47 191.0 228 48.7
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 3.5e-46 189.1 224 49.6
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 3.5e-46 189.1 234 50.4
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 3.5e-46 189.1 236 50.4
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 7.8e-46 188.0 157 61.1
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 1.7e-45 186.8 215 49.8
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 3.0e-45 186.0 236 50.0
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 1.1e-44 184.1 234 49.6
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.1e-44 184.1 240 47.9
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.1e-44 184.1 236 46.6
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.5e-44 183.7 231 48.9
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.2e-43 180.6 233 48.1
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 3.6e-43 179.1 202 52.0
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 3.6e-43 179.1 188 52.1
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.8e-42 176.8 227 46.7
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 1.8e-42 176.8 232 47.0
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 2.4e-42 176.4 233 46.4
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 2.4e-42 176.4 160 59.4
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 2.4e-42 176.4 233 47.2
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 3.1e-42 176.0 215 49.8
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 3.1e-42 176.0 236 46.6
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 8.9e-42 174.5 234 47.0
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 8.9e-42 174.5 229 47.2
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 2.0e-41 173.3 230 44.3
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 2.0e-41 173.3 197 49.2
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 4.4e-41 172.2 234 45.7
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 7.6e-41 171.4 228 44.7
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 7.6e-41 171.4 230 46.1
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 9.9e-41 171.0 233 45.5
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 3.8e-40 169.1 183 50.8
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 6.4e-40 168.3 232 47.0
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 8.4e-40 167.9 149 55.0
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.9e-39 166.8 149 54.4
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.9e-39 166.8 226 47.3
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.2e-39 166.0 193 46.6
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 4.2e-39 165.6 149 55.7
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 5.4e-39 165.2 158 53.8
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 5.4e-39 165.2 231 43.7
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 5.4e-39 165.2 154 58.4
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 7.1e-39 164.9 233 42.9
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 9.3e-39 164.5 147 57.1
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 9.3e-39 164.5 233 43.8
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 1.2e-38 164.1 230 42.6
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 1.2e-38 164.1 309 38.8
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 1.6e-38 163.7 225 45.8
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 2.1e-38 163.3 234 45.3
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.7e-38 162.9 229 42.4
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 2.7e-38 162.9 232 49.1
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 3.5e-38 162.5 149 54.4
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 3.5e-38 162.5 149 53.0
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 3.5e-38 162.5 154 57.1
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 6.0e-38 161.8 132 61.4
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 6.0e-38 161.8 233 43.3
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 7.8e-38 161.4 147 53.1
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 7.8e-38 161.4 231 43.3
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.0e-37 161.0 199 50.8
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.0e-37 161.0 234 46.2
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 1.3e-37 160.6 149 53.0
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 1.3e-37 160.6 210 47.1
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.3e-37 160.6 230 47.8
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.7e-37 160.2 182 49.5
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 1.7e-37 160.2 180 48.3
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 1.7e-37 160.2 236 41.5
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 2.3e-37 159.8 149 53.7
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.3e-37 159.8 149 53.0
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.3e-37 159.8 149 53.0
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.3e-37 159.8 149 53.0
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 3.9e-37 159.1 228 43.9
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.5e-36 156.4 229 41.5
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 3.3e-36 156.0 149 51.7
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 7.3e-36 154.8 255 40.0
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 9.6e-36 154.5 232 40.5
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.3e-35 154.1 233 45.1
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 2.8e-35 152.9 215 47.4
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 6.2e-35 151.8 213 47.9
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.1e-34 151.0 147 53.1
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.4e-34 150.6 147 53.1
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.8e-34 150.2 187 47.6
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 6.9e-34 148.3 192 43.2
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 2.0e-33 146.7 190 48.4
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 8.4e-32 141.4 177 48.6
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 2.7e-30 136.3 132 53.8
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 2.3e-29 133.3 145 51.7
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 3.0e-29 132.9 196 44.9
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 7.4e-28 128.3 189 40.2
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.4e-26 124.0 237 42.2
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 2.4e-26 123.2 234 38.9
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 1.1e-18 97.8 149 39.6
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 7.6e-17 91.7 113 50.4
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 2.3e-13 80.1 76 57.9
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 6.7e-13 78.6 150 34.0
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 1.5e-12 77.4 150 34.0
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 3.8e-08 62.8 134 27.6
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.4e-07 60.8 61 45.9


User provided reference genes

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