Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C225G6 Lonicera japonica HOM05D007983 ORTHO05D010117 1.3e-274 949.1 474 100.0
Lj7A227T29 Lonicera japonica HOM05D007983 ORTHO05D010117 8.9e-119 431.4 332 73.2
Actinidia29344 Actinidia chinensis HOM05D007983 ORTHO05D010117 5.4e-100 369.0 530 46.2
Dinv02180 Davidia involucrata HOM05D007983 ORTHO05D010117 5.4e-100 369.0 490 49.4
Hma1.2p1_0231F.1_g097380 Hydrangea macrophylla HOM05D007983 ORTHO05D010117 1.8e-82 310.8 500 44.2
Nn8g38701 Nelumbo nucifera HOM05D007983 ORTHO05D010117 3.7e-80 303.1 530 41.1
GSVIVG01035456001 Vitis vinifera HOM05D007983 ORTHO05D010117 1.7e-77 294.3 515 41.4
Cc08_g01250 Coffea canephora HOM05D007983 ORTHO05D010117 4.5e-70 269.6 507 40.2
QL02p016696 Quercus lobata HOM05D007983 ORTHO05D010117 7.6e-70 268.9 529 39.9
TAR383G0143 Trochodendron aralioides HOM05D007983 ORTHO05D010117 3.2e-68 263.5 430 43.7
Haze_18113 Corylus avellana HOM05D007983 ORTHO05D010117 2.6e-62 243.8 535 38.3
Thecc.09G062200 Theobroma cacao HOM05D007983 ORTHO05D010117 3.4e-62 243.4 507 37.3
Manes.16G085100 Manihot esculenta HOM05D007983 ORTHO05D010117 2.2e-61 240.7 500 38.2
Cfa018016 Carpinus fangiana HOM05D007983 ORTHO05D010117 9.4e-60 235.3 424 41.7
Aqoxy7G01072 Aquilegia oxysepala HOM05D007983 ORTHO05D010117 3.6e-59 233.4 513 35.9
COL.COLO4_21129 Corchorus olitorius HOM05D007983 ORTHO05D010117 4.7e-59 233.0 506 36.0
Atru.chr7.1856 Acer truncatum HOM05D007983 ORTHO05D010117 1.7e-56 224.6 511 37.0
Prupe.1G405500 Prunus persica HOM05D007983 ORTHO05D010117 1.7e-56 224.6 506 36.4
Peaxi162Scf00101g00166 Petunia axillaris HOM05D007983 ORTHO05D010117 1.3e-53 214.9 506 35.4
Gorai.010G097000 Gossypium raimondii HOM05D007983 ORTHO05D010117 1.7e-53 214.5 513 35.1
Oeu022786.3 Olea europaea HOM05D007983 ORTHO05D010117 3.8e-53 213.4 499 36.9
Nitab4.5_0008611g0010 Nicotiana tabacum HOM05D007983 ORTHO05D010117 7.2e-52 209.1 445 38.2
Ciclev10007465m.g Citrus clementina HOM05D007983 ORTHO05D010117 9.4e-52 208.8 527 35.7
Gohir.D06G083500 Gossypium hirsutum HOM05D007983 ORTHO05D010117 1.2e-51 208.4 510 34.9
MBI13_g11355_MAGBIO Magnolia biondii HOM05D007983 ORTHO05D010117 4.7e-51 206.5 522 36.4
RcHm_v2.0_Chr6g0311661 Rosa chinensis HOM05D007983 ORTHO05D010117 4.7e-51 206.5 543 33.7
MD15G1051500 Malus domestica HOM05D007983 ORTHO05D010117 1.0e-50 205.3 507 33.9
Gohir.A06G082600 Gossypium hirsutum HOM05D007983 ORTHO05D010117 3.0e-50 203.8 523 34.6
Oeu003976.2 Olea europaea HOM05D007983 ORTHO05D010117 2.0e-49 201.1 501 34.1
SGA_v2.0_scaffold20G09171 Striga asiatica HOM05D007983 ORTHO05D010117 3.7e-48 196.8 482 35.5
Actinidia03544 Actinidia chinensis HOM05D007983 ORTHO05D010117 4.8e-48 196.4 295 43.4
Nitab4.5_0000446g0230 Nicotiana tabacum HOM05D007983 ORTHO05D010117 6.3e-48 196.1 437 36.6
CAN.G20.9 Capsicum annuum HOM05D007983 ORTHO05D010117 5.3e-47 193.0 521 34.2
FAN27G2148 Fragaria x ananassa HOM05D007983 ORTHO05D010117 1.9e-44 184.5 536 33.8
MD08G1070600 Malus domestica HOM05D007983 ORTHO05D010117 2.5e-44 184.1 507 33.5
CANSAT25G2345 Cannabis sativa HOM05D007983 ORTHO05D010117 1.6e-43 181.4 511 33.9
SGA_v2.0_scaffold64G21870 Striga asiatica HOM05D007983 ORTHO05D010117 1.0e-42 178.7 514 32.3
FvH4_2g31120 Fragaria vesca HOM05D007983 ORTHO05D010117 2.3e-42 177.6 548 32.3
ATR0598G010 Amborella trichopoda HOM05D007983 ORTHO05D010117 3.0e-42 177.2 492 32.7
HanXRQChr05g0136011 Helianthus annuus HOM05D007983 ORTHO05D010117 5.2e-42 176.4 431 36.9
FAN24G0660 Fragaria x ananassa HOM05D007983 ORTHO05D010117 1.1e-39 168.7 538 32.2
EL10Ac2g03791 Beta vulgaris HOM05D007983 ORTHO05D010117 1.6e-38 164.9 501 32.7
ECA236G1209 Erigeron canadensis HOM05D007983 ORTHO05D010117 3.5e-38 163.7 501 33.9
AUR62009087 Chenopodium quinoa HOM05D007983 ORTHO05D010117 8.8e-34 149.1 507 30.0
Migut.A00082 Erythranthe guttata HOM05D007983 ORTHO05D010117 4.4e-33 146.7 474 32.5
PGSC0003DMG400021755 Solanum tuberosum HOM05D007983 ORTHO05D010117 6.3e-32 142.9 397 33.0
AUR62020583 Chenopodium quinoa HOM05D007983 ORTHO05D010117 1.1e-31 142.1 512 28.7
HanXRQChr09g0261791 Helianthus annuus HOM05D007983 ORTHO05D010117 1.1e-31 142.1 435 32.6
DCAR_004382 Daucus carota HOM05D007983 ORTHO05D010117 4.1e-31 140.2 494 31.6
Eucgr.C00720 Eucalyptus grandis HOM05D007983 ORTHO05D010117 9.5e-28 129.0 514 29.4
CDE05G0854 Ceratophyllum demersum HOM05D007983 ORTHO05D010117 1.1e-23 115.5 454 30.2
Lsat_1_v5_gn_8_70680 Lactuca sativa HOM05D007983 ORTHO05D010117 2.9e-21 107.5 454 30.2
TWI63G1392 Tripterygium wilfordii HOM05D007983 ORTHO05D010117 8.0e-19 99.4 205 35.6
Solyc08g061890.4 Solanum lycopersicum HOM05D007983 ORTHO05D010117 1.4e-18 98.6 463 27.0
Hund19424 Selenicereus undatus HOM05D007983 ORTHO05D010117 4.0e-18 97.1 422 30.1
SEGI_25530 Sequoiadendron giganteum HOM05D007983 ORTHO05D010117 1.2e-17 95.5 387 29.7
Sopen08g017390 Solanum pennellii HOM05D007983 ORTHO05D010117 1.5e-17 95.1 447 27.3
Ah.10g033950 Amaranthus hybridus HOM05D007983 ORTHO05D010117 2.6e-17 94.4 431 29.0
ClCG08G009810 Citrullus lanatus HOM05D007983 ORTHO05D010117 2.2e-16 91.3 491 27.3
ClCG08G009840 Citrullus lanatus HOM05D007983 ORTHO05D010117 6.4e-16 89.7 491 26.9
QL02p014349 Quercus lobata HOM05D007983 ORTHO05D010117 1.6e-14 85.1 140 47.9
MELO3C011486.2 Cucumis melo HOM05D007983 ORTHO05D010117 8.6e-13 79.3 489 26.6
CsaV3_6G031940 Cucumis sativus L. HOM05D007983 ORTHO05D010117 2.1e-11 74.7 478 26.8
DCAR_001219 Daucus carota HOM05D007983 ORTHO05D010117 2.8e-11 74.3 102 38.2
TWI34G0821 Tripterygium wilfordii HOM05D007983 ORTHO05D010117 7.0e-07 59.7 142 34.5


User provided reference genes

Program Settings