Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A8G44 Lonicera japonica HOM05D005714 ORTHO05D006812 8.4e-183 643.7 349 100.0
Dinv33913 Davidia involucrata HOM05D005714 ORTHO05D006812 3.1e-137 492.3 351 76.6
CSS0016024 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 2.5e-134 482.6 351 76.9
CSS0020756 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 4.2e-134 481.9 351 76.9
Actinidia36301 Actinidia chinensis HOM05D005714 ORTHO05D006812 3.4e-131 472.2 349 74.8
Oeu032870.1 Olea europaea HOM05D005714 ORTHO05D006812 1.5e-123 446.8 353 69.7
Prupe.3G242300 Prunus persica HOM05D005714 ORTHO05D006812 1.7e-122 443.4 350 70.6
RcHm_v2.0_Chr2g0163761 Rosa chinensis HOM05D005714 ORTHO05D006812 8.3e-122 441.0 350 70.6
CiPaw.03G006400 Carya illinoinensis HOM05D005714 ORTHO05D006812 3.1e-121 439.1 352 69.9
Nitab4.5_0000612g0140 Nicotiana tabacum HOM05D005714 ORTHO05D006812 1.2e-120 437.2 349 72.2
FvH4_6g45610 Fragaria vesca HOM05D005714 ORTHO05D006812 3.5e-120 435.6 350 70.0
Rhsim10G0064900 Rhododendron simsii HOM05D005714 ORTHO05D006812 4.5e-120 435.3 365 70.7
Cfa007977 Carpinus fangiana HOM05D001801 ORTHO05D001739 7.3e-118 427.9 351 68.7
Cc07_g04960 Coffea canephora HOM05D005714 ORTHO05D006812 1.2e-117 427.2 351 69.5
Thecc.04G144400 Theobroma cacao HOM05D005714 ORTHO05D006812 8.0e-117 424.5 352 68.2
Peaxi162Scf00479g00037 Petunia axillaris HOM05D005714 ORTHO05D006812 1.0e-116 424.1 349 70.2
MD09G1081200 Malus domestica HOM05D005714 ORTHO05D006812 6.8e-116 421.4 349 69.1
Nn3g17645 Nelumbo nucifera HOM05D005714 ORTHO05D006812 8.9e-116 421.0 361 67.0
CANSAT64G2721 Cannabis sativa HOM05D005714 ORTHO05D006812 2.0e-115 419.9 352 68.8
ECA232G3066 Erigeron canadensis HOM05D005714 ORTHO05D006812 2.6e-115 419.5 354 68.6
MSTRG.2945 Avicennia marina HOM05D005714 ORTHO05D006812 4.4e-115 418.7 353 67.4
Potri.017G110300 Populus trichocarpa HOM05D005714 ORTHO05D006812 4.4e-115 418.7 350 68.3
Gorai.007G187100 Gossypium raimondii HOM05D005714 ORTHO05D006812 7.5e-115 417.9 353 68.3
Gohir.D11G174600 Gossypium hirsutum HOM05D005714 ORTHO05D006812 2.9e-114 416.0 353 68.3
MD17G1072600 Malus domestica HOM05D005714 ORTHO05D006812 2.9e-114 416.0 349 68.5
Migut.H00540 Erythranthe guttata HOM05D005714 ORTHO05D006812 4.9e-114 415.2 354 67.5
Sabra17G0092200 Salix brachista HOM05D005714 ORTHO05D006812 1.1e-113 414.1 350 67.4
PGSC0003DMG400018763 Solanum tuberosum HOM05D005714 ORTHO05D006812 1.1e-113 414.1 350 68.3
GSVIVG01036468001 Vitis vinifera HOM05D005714 ORTHO05D006812 4.1e-113 412.1 350 65.7
Manes.02G065100 Manihot esculenta HOM05D005714 ORTHO05D006812 5.4e-113 411.8 351 68.4
Nitab4.5_0003161g0010 Nicotiana tabacum HOM05D005714 ORTHO05D006812 1.2e-112 410.6 342 69.3
SalBow1G2935 Salvia bowleyana HOM05D005714 ORTHO05D006812 2.0e-112 409.8 353 65.7
Cpa.g.sc179.47 Carica papaya HOM05D005714 ORTHO05D006812 4.6e-112 408.7 351 68.4
Eucgr.J01456 Eucalyptus grandis HOM05D005714 ORTHO05D006812 4.6e-112 408.7 352 64.8
SalBow1G3421 Salvia bowleyana HOM05D005714 ORTHO05D006812 1.7e-111 406.8 353 65.2
MBI15_g36941_MAGBIO Magnolia biondii HOM05D005714 ORTHO05D006812 3.9e-111 405.6 352 64.5
SGA_v2.0_scaffold204G41660 Striga asiatica HOM05D005714 ORTHO05D006812 1.5e-110 403.7 353 66.3
THA.LOC104802994 Tarenaya hassleriana HOM05D005714 ORTHO05D006812 7.3e-110 401.4 350 66.6
COL.COLO4_03920 Corchorus olitorius HOM05D005714 ORTHO05D006812 1.2e-109 400.6 351 66.4
PGR042G2576 Punica granatum HOM05D005714 ORTHO05D006812 8.0e-109 397.9 351 65.0
CSS0044543 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 2.3e-108 396.4 352 66.5
CSS0047938 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 2.3e-108 396.4 352 66.5
Sed0016830 Sechium edule HOM05D005714 ORTHO05D006812 4.4e-107 392.1 351 65.0
HanXRQChr15g0490211 Helianthus annuus HOM05D005714 ORTHO05D006812 3.7e-106 389.0 350 65.4
Atru.BG.225.p Acer truncatum HOM05D005714 ORTHO05D006812 8.3e-106 387.9 352 65.1
Duzib138G1804 Durio zibethinus HOM05D005714 ORTHO05D006812 1.1e-105 387.5 340 65.9
FAN09G3422 Fragaria x ananassa HOM05D005714 ORTHO05D006812 1.4e-105 387.1 350 64.9
vmacro05584 Vaccinium macrocarpon HOM05D005714 ORTHO05D006812 1.9e-105 386.7 403 60.0
CAN.G551.30 Capsicum annuum HOM05D005714 ORTHO05D006812 2.4e-105 386.3 351 67.2
QL02p053457 Quercus lobata HOM05D005714 ORTHO05D006812 1.6e-104 383.6 351 64.4
MELO3C023776.2 Cucumis melo HOM05D005714 ORTHO05D006812 2.7e-104 382.9 363 63.6
Potri.004G105400 Populus trichocarpa HOM05D005714 ORTHO05D006812 2.7e-104 382.9 350 64.0
PSO063G3590 Papaver somniferum HOM05D005714 ORTHO05D006812 1.0e-103 380.9 354 63.8
AT5G15880 Arabidopsis thaliana HOM05D005714 ORTHO05D006812 3.0e-103 379.4 351 64.4
Sc10g0001430 Simmondsia chinensis HOM05D005714 ORTHO05D006812 5.0e-103 378.6 351 63.8
Lalb_Chr21g0317991 Lupinus albus HOM05D005714 ORTHO05D006812 6.6e-103 378.3 352 62.5
Sp6g28230 Schrenkiella parvula HOM05D005714 ORTHO05D006812 8.6e-103 377.9 351 64.7
Carub.0006s1407 Capsella rubella HOM05D005714 ORTHO05D006812 1.5e-102 377.1 350 63.4
Aa31LG11G13710 Aethionema arabicum HOM05D005714 ORTHO05D006812 3.3e-102 375.9 351 64.1
CARHR197420 Cardamine hirsuta HOM05D005714 ORTHO05D006812 3.3e-102 375.9 350 63.1
Thhalv10015850m.g Eutrema salsugineum HOM05D005714 ORTHO05D006812 3.3e-102 375.9 351 64.1
CsaV3_3G020470 Cucumis sativus L. HOM05D005714 ORTHO05D006812 4.3e-102 375.6 356 63.2
Aqoxy3G03832 Aquilegia oxysepala HOM05D005714 ORTHO05D006812 7.3e-102 374.8 350 62.9
Medtr6g016870 Medicago truncatula HOM05D005714 ORTHO05D006812 8.1e-101 371.3 355 61.7
Phvul.004G049100 Phaseolus vulgaris HOM05D005714 ORTHO05D006812 1.4e-100 370.5 350 63.7
Lsat_1_v5_gn_4_175801 Lactuca sativa HOM05D005714 ORTHO05D006812 3.1e-100 369.4 346 64.2
Sabra04G0076700 Salix brachista HOM05D005714 ORTHO05D006812 8.9e-100 367.9 420 53.6
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 5.8e-99 365.2 353 61.8
ClCG05G011990 Citrullus lanatus HOM05D005714 ORTHO05D006812 7.5e-99 364.8 375 61.1
BraA03t10072Z Brassica rapa HOM05D005714 ORTHO05D006812 2.2e-98 363.2 356 63.8
EL10Ac2g04627 Beta vulgaris HOM05D005714 ORTHO05D006812 4.9e-98 362.1 352 61.9
AL6G26770 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 6.4e-98 361.7 351 63.2
AL6G26782 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 6.4e-98 361.7 351 63.2
BolC3t13356H Brassica oleracea HOM05D005714 ORTHO05D006812 1.4e-97 360.5 351 63.2
A03p07460 Brassica napus HOM05D005714 ORTHO05D006812 3.2e-97 359.4 356 63.5
C03p08510 Brassica napus HOM05D005714 ORTHO05D006812 4.1e-97 359.0 351 63.2
BraA03t10075Z Brassica rapa HOM05D005714 ORTHO05D006812 5.4e-97 358.6 356 63.5
C03p08640 Brassica napus HOM05D005714 ORTHO05D006812 9.2e-97 357.8 351 62.1
BolC3t13366H Brassica oleracea HOM05D005714 ORTHO05D006812 9.2e-97 357.8 351 62.1
TWI74G1644 Tripterygium wilfordii HOM05D005714 ORTHO05D006812 1.2e-96 357.5 350 62.9
BraA10t44382Z Brassica rapa HOM05D005714 ORTHO05D006812 2.1e-96 356.7 351 63.0
Hund16108 Selenicereus undatus HOM05D005714 ORTHO05D006812 6.6e-95 351.7 365 60.8
BcaB08g36870 Brassica carinata HOM05D005714 ORTHO05D006812 5.6e-94 348.6 351 61.8
TPR.G9671 Trifolium pratense HOM05D005714 ORTHO05D006812 5.6e-94 348.6 356 58.7
arahy.Tifrunner.gnm1.ann1.AEQW57 Arachis hypogaea HOM05D005714 ORTHO05D006812 7.3e-94 348.2 351 60.1
PSO782G2399 Papaver somniferum HOM05D005714 ORTHO05D006812 1.6e-93 347.1 340 61.5
Ah.10g037360 Amaranthus hybridus HOM05D005714 ORTHO05D006812 2.1e-93 346.7 340 60.3
Ciclev10012317m.g Citrus clementina HOM05D005714 ORTHO05D006812 1.4e-92 344.0 301 65.8
Actinidia18116 Actinidia chinensis HOM05D005714 ORTHO05D006812 4.9e-90 335.5 352 60.2
arahy.Tifrunner.gnm1.ann1.R8VTVZ Arachis hypogaea HOM05D005714 ORTHO05D006812 4.9e-90 335.5 373 56.6
BcaB01g05015 Brassica carinata HOM05D005714 ORTHO05D006812 1.9e-89 333.6 337 61.1
HPP92_027404 Vanilla planifolia HOM05D005714 ORTHO05D006812 2.1e-88 330.1 352 56.5
Lj2g0024465 Lotus japonicus HOM05D005714 ORTHO05D006812 7.8e-88 328.2 342 57.3
BolC9t58957H Brassica oleracea HOM05D005714 ORTHO05D006812 2.3e-87 326.6 357 59.1
CDE02G2817 Ceratophyllum demersum HOM05D005714 ORTHO05D006812 5.6e-86 322.0 379 52.2
Gohir.A11G168300 Gossypium hirsutum HOM05D005714 ORTHO05D006812 4.6e-80 302.4 252 67.1
Os09g0108400 Oryza sativa ssp. japonica HOM05D005714 ORTHO05D006812 7.3e-78 295.0 353 52.7
unitig_899.g15126 Utricularia gibba HOM05D005714 ORTHO05D006812 2.4e-73 280.0 353 53.3
Zm00001eb208920 Zea mays HOM05D005714 ORTHO05D006812 1.7e-66 257.3 344 51.7
Psat1g062640 Pisum sativum HOM05D005714 ORTHO05D006812 1.9e-62 243.8 233 61.4
FAN05G0119 Fragaria x ananassa HOM05D005714 ORTHO05D006812 1.3e-61 241.1 208 63.9
Cfa007975 Carpinus fangiana HOM05D005714 ORTHO05D006812 8.2e-61 238.4 316 49.7
Solyc03g046260.2 Solanum lycopersicum HOM05D005714 ORTHO05D006812 1.4e-60 237.7 232 62.5
TAR622G1272 Trochodendron aralioides HOM05D005714 ORTHO05D006812 6.5e-58 228.8 198 65.2
VMungo0464G1377 Vigna mungo HOM05D005714 ORTHO05D006812 2.5e-54 216.9 233 57.9
RcHm_v2.0_Chr2g0163701 Rosa chinensis HOM05D005714 ORTHO05D006812 1.2e-51 208.0 143 76.9
Glyma.19G041200 Glycine max HOM05D005714 ORTHO05D006812 2.1e-48 197.2 166 69.3
MD17G1072400 Malus domestica HOM05D005714 ORTHO05D006812 3.1e-44 183.3 202 55.9
Pp3c1_6350 Physcomitrium patens HOM05D005714 ORTHO05D006812 2.2e-42 177.2 377 37.4
AUR62014554 Chenopodium quinoa HOM05D005714 ORTHO05D006812 9.4e-41 171.8 235 48.9
AagrBONN_evm.TU.Sc2ySwM_344.4539 Anthoceros agrestis HOM05D005714 ORTHO05D006812 1.2e-40 171.4 295 39.7
AUR62008947 Chenopodium quinoa HOM05D005714 ORTHO05D006812 6.1e-40 169.1 237 48.1
ATR0752G125 Amborella trichopoda HOM05D005714 ORTHO05D006812 9.7e-38 161.8 133 66.2
Sopen03g009720 Solanum pennellii HOM05D005714 ORTHO05D006812 3.8e-34 149.8 96 79.2
SMO139G0044 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 9.4e-33 145.2 308 36.0
C09p61160 Brassica napus HOM05D005714 ORTHO05D006812 4.7e-32 142.9 106 71.7
ATR0752G036 Amborella trichopoda HOM05D005714 ORTHO05D006812 1.0e-31 141.7 229 45.0
A10p17320 Brassica napus HOM05D000327 ORTHO05D006812 1.8e-31 141.0 231 45.9
Mapoly0066s0019 Marchantia polymorpha HOM05D005714 ORTHO05D006812 1.0e-26 125.2 374 31.3
BcaC04g18926 Brassica carinata HOM05D005714 ORTHO05D006812 4.0e-23 113.2 325 34.5
RcHm_v2.0_Chr2g0163721 Rosa chinensis HOM05D005714 ORTHO05D006812 1.5e-22 111.3 71 80.3
Medtr3g067495 Medicago truncatula HOM05D005714 ORTHO05D006812 1.3e-21 108.2 93 62.4
C09p61150 Brassica napus HOM05D005714 ORTHO05D006812 1.7e-21 107.8 102 63.7
SMO145G0024 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 3.7e-21 106.7 312 32.4
RcHm_v2.0_Chr2g0163711 Rosa chinensis HOM05D005714 ORTHO05D006812 1.2e-16 91.7 77 67.5
SEGI_16525 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 4.7e-16 89.7 96 50.0
RcHm_v2.0_Chr2g0163621 Rosa chinensis HOM05D005714 ORTHO05D006812 1.4e-15 88.2 86 61.6
SEGI_18448 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 3.0e-15 87.0 182 39.0
BcaB07g33635 Brassica carinata HOM05D005714 ORTHO05D006812 5.7e-14 82.8 123 46.3
Sopen03g009730 Solanum pennellii HOM05D005714 ORTHO05D006812 1.0e-10 72.0 94 52.1
SGA_v2.0_scaffold254G45250 Striga asiatica HOM05D005714 ORTHO05D051379 1.1e-09 68.6 46 78.3
RcHm_v2.0_Chr2g0163651 Rosa chinensis HOM05D005714 ORTHO05D006812 9.5e-09 65.5 86 47.7
FAN09G3753 Fragaria x ananassa HOM05D001104 ORTHO05D008876 6.8e-07 59.3 63 50.8
BcaB08g36868 Brassica carinata HOM05D005714 ORTHO05D006812 1.2e-06 58.5 121 42.1


User provided reference genes

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