Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A8G41 Lonicera japonica HOM05D006790 ORTHO05D007715 4.5e-70 267.7 124 100.0
Hma1.2p1_0588F.1_g184410 Hydrangea macrophylla HOM05D006790 ORTHO05D007715 8.2e-48 193.7 119 70.6
Dinv33908 Davidia involucrata HOM05D006790 ORTHO05D007715 4.1e-47 191.4 119 72.3
CSS0027059 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 4.2e-44 181.4 119 66.4
GSVIVG01036474001 Vitis vinifera HOM05D006790 ORTHO05D007715 5.5e-44 181.0 119 68.1
TAR371G0767 Trochodendron aralioides HOM05D006790 ORTHO05D007715 3.9e-42 174.9 119 68.1
Nitab4.5_0004656g0020 Nicotiana tabacum HOM05D006790 ORTHO05D007715 6.3e-40 167.5 116 62.9
Cfa007981 Carpinus fangiana HOM05D006790 ORTHO05D007715 4.1e-39 164.9 115 65.2
Sopen02g015820 Solanum pennellii HOM05D006790 ORTHO05D007715 6.9e-39 164.1 116 61.2
Rhsim10G0065300 Rhododendron simsii HOM05D006790 ORTHO05D007715 9.1e-39 163.7 156 50.0
PGSC0003DMG400026556 Solanum tuberosum HOM05D006790 ORTHO05D007715 9.1e-39 163.7 116 60.3
Migut.H00551 Erythranthe guttata HOM05D006790 ORTHO05D007715 1.5e-38 162.9 119 63.9
Haze_14092 Corylus avellana HOM05D006790 ORTHO05D007715 2.0e-38 162.5 115 64.3
Cc07_g04880 Coffea canephora HOM05D006790 ORTHO05D007715 5.9e-38 161.0 114 64.0
Peaxi162Scf00019g00104 Petunia axillaris HOM05D006790 ORTHO05D007715 7.7e-38 160.6 114 62.3
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 7.7e-38 160.6 115 64.3
CiPaw.04G004400 Carya illinoinensis HOM05D006790 ORTHO05D007715 1.3e-37 159.8 115 63.5
CAN.G93.39 Capsicum annuum HOM05D006790 ORTHO05D007715 5.0e-37 157.9 116 59.5
Solyc02g065620.3 Solanum lycopersicum HOM05D006790 ORTHO05D007715 8.5e-37 157.1 115 60.9
MSTRG.2949 Avicennia marina HOM05D006790 ORTHO05D007715 1.9e-36 156.0 120 61.7
Nn3g17634 Nelumbo nucifera HOM05D006790 ORTHO05D007715 3.2e-36 155.2 118 63.6
ClCG05G011930 Citrullus lanatus HOM05D006790 ORTHO05D007715 4.2e-36 154.8 112 62.5
Sed0013505 Sechium edule HOM05D006790 ORTHO05D007715 9.4e-36 153.7 116 60.3
Lsat_1_v5_gn_2_86460 Lactuca sativa HOM05D006790 ORTHO05D007715 1.8e-34 149.4 116 59.5
Potri.004G106000 Populus trichocarpa HOM05D006790 ORTHO05D007715 1.8e-34 149.4 119 58.0
Thecc.07G120400 Theobroma cacao HOM05D006790 ORTHO05D007715 3.0e-34 148.7 109 63.3
Manes.01G107100 Manihot esculenta HOM05D006790 ORTHO05D007715 3.9e-34 148.3 119 57.1
Cpa.g.sc179.51 Carica papaya HOM05D006790 ORTHO05D007715 8.8e-34 147.1 115 60.9
THA.LOC104822671 Tarenaya hassleriana HOM05D006790 ORTHO05D007715 8.8e-34 147.1 115 59.1
Aqoxy3G03826 Aquilegia oxysepala HOM05D006790 ORTHO05D007715 1.5e-33 146.4 115 61.7
MELO3C023782.2 Cucumis melo HOM05D006790 ORTHO05D007715 3.3e-33 145.2 110 60.0
Zm00001eb178960 Zea mays HOM05D006790 ORTHO05D007715 3.3e-33 145.2 119 60.5
CsaV3_3G020510 Cucumis sativus L. HOM05D006790 ORTHO05D007715 4.4e-33 144.8 112 58.9
HanXRQChr14g0448141 Helianthus annuus HOM05D006790 ORTHO05D007715 4.4e-33 144.8 114 59.6
Atru.chr8.778 Acer truncatum HOM05D006790 ORTHO05D007715 5.7e-33 144.4 112 57.1
Ciclev10011421m.g Citrus clementina HOM05D006790 ORTHO05D007715 2.2e-32 142.5 116 56.0
Os08g0414200 Oryza sativa ssp. japonica HOM05D006790 ORTHO05D007715 1.1e-31 140.2 119 58.0
HPP92_018029 Vanilla planifolia HOM05D006790 ORTHO05D007715 4.1e-31 138.3 119 56.3
Duzib268G0872 Durio zibethinus HOM05D006790 ORTHO05D007715 9.1e-31 137.1 109 57.8
PSO063G5157 Papaver somniferum HOM05D006790 ORTHO05D007715 9.1e-31 137.1 117 55.6
Prupe.3G242700 Prunus persica HOM05D006790 ORTHO05D007715 1.2e-30 136.7 113 56.6
PGR004G2315 Punica granatum HOM05D006790 ORTHO05D007715 1.2e-30 136.7 119 53.8
PSO782G2169 Papaver somniferum HOM05D006790 ORTHO05D007715 2.6e-30 135.6 117 55.6
Hund19591 Selenicereus undatus HOM05D006790 ORTHO05D007715 5.0e-29 131.3 114 55.3
TWI53G1762 Tripterygium wilfordii HOM05D006790 ORTHO05D007715 5.0e-29 131.3 116 54.3
A02p14030 Brassica napus HOM05D006790 ORTHO05D007715 8.5e-29 130.6 117 54.7
BraA02t06464Z Brassica rapa HOM05D006790 ORTHO05D007715 8.5e-29 130.6 117 54.7
Aa31LG2G3550 Aethionema arabicum HOM05D006790 ORTHO05D007715 1.1e-28 130.2 119 51.3
Psat1g062760 Pisum sativum HOM05D006790 ORTHO05D007715 1.1e-28 130.2 111 55.0
Sp5g22110 Schrenkiella parvula HOM05D006790 ORTHO05D007715 1.5e-28 129.8 121 53.7
AUR62031597 Chenopodium quinoa HOM05D006790 ORTHO05D007715 1.9e-28 129.4 113 49.6
Gorai.013G174500 Gossypium raimondii HOM05D006790 ORTHO05D007715 1.9e-28 129.4 109 56.0
BolC2t08416H Brassica oleracea HOM05D006790 ORTHO05D007715 3.2e-28 128.6 123 52.8
Thhalv10018524m.g Eutrema salsugineum HOM05D006790 ORTHO05D007715 4.2e-28 128.3 121 52.1
MD17G1072100 Malus domestica HOM05D006790 ORTHO05D007715 4.2e-28 128.3 114 54.4
Phvul.004G048500 Phaseolus vulgaris HOM05D006790 ORTHO05D007715 4.2e-28 128.3 115 52.2
BcaB05g24242 Brassica carinata HOM05D006790 ORTHO05D007715 5.5e-28 127.9 123 52.8
CARHR059630 Cardamine hirsuta HOM05D006790 ORTHO05D007715 5.5e-28 127.9 121 52.1
BcaC03g14811 Brassica carinata HOM05D006790 ORTHO05D007715 7.2e-28 127.5 123 52.0
Gohir.A13G150200 Gossypium hirsutum HOM05D006790 ORTHO05D007715 7.2e-28 127.5 109 54.1
VMungo0464G1394 Vigna mungo HOM05D006790 ORTHO05D007715 7.2e-28 127.5 115 50.4
Sc23g0006450 Simmondsia chinensis HOM05D006790 ORTHO05D007715 9.4e-28 127.1 109 56.0
AT1G67180 Arabidopsis thaliana HOM05D006790 ORTHO05D007715 1.2e-27 126.7 123 52.0
Ah.09g229220 Amaranthus hybridus HOM05D006790 ORTHO05D007715 1.6e-27 126.3 114 50.0
C02p22620 Brassica napus HOM05D006790 ORTHO05D007715 2.1e-27 125.9 123 52.0
Gohir.D13G154500 Gossypium hirsutum HOM05D006790 ORTHO05D007715 2.1e-27 125.9 109 55.0
Glyma.19G042100 Glycine max HOM05D006790 ORTHO05D007715 2.7e-27 125.6 113 53.1
AL2G25680 Arabidopsis lyrata HOM05D006790 ORTHO05D007715 4.7e-27 124.8 121 50.4
Lalb_Chr02g0158421 Lupinus albus HOM05D006790 ORTHO05D007715 4.7e-27 124.8 116 50.9
Medtr6g016895 Medicago truncatula HOM05D006790 ORTHO05D007715 6.1e-27 124.4 111 53.2
Lalb_Chr21g0318021 Lupinus albus HOM05D006790 ORTHO05D007715 1.4e-26 123.2 116 50.0
FAN02G3906 Fragaria x ananassa HOM05D006790 ORTHO05D007715 1.8e-26 122.9 114 50.9
SGA_v2.0_scaffold204G41662 Striga asiatica HOM05D006790 ORTHO05D007715 1.8e-26 122.9 110 56.4
Carub.0002s1345 Capsella rubella HOM05D006790 ORTHO05D007715 6.7e-26 120.9 113 49.6
RcHm_v2.0_Chr2g0163811 Rosa chinensis HOM05D006790 ORTHO05D007715 1.5e-25 119.8 113 52.2
BcaNung06915 Brassica carinata HOM05D006790 ORTHO05D007715 3.3e-25 118.6 123 48.8
EL10Ac2g04125 Beta vulgaris HOM05D006790 ORTHO05D007715 7.5e-25 117.5 122 46.7
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 7.5e-25 117.5 111 50.5
TPR.G9681 Trifolium pratense HOM05D006790 ORTHO05D007715 7.5e-25 117.5 111 50.5
Actinidia36298 Actinidia chinensis HOM05D006790 ORTHO05D007715 1.3e-24 116.7 86 65.1
ECA238G0674 Erigeron canadensis HOM05D000337 ORTHO05D007715 1.7e-24 116.3 112 50.0
arahy.Tifrunner.gnm1.ann1.9J9R5Y Arachis hypogaea HOM05D006790 ORTHO05D007715 2.8e-24 115.5 116 48.3
arahy.Tifrunner.gnm1.ann1.3TKD3Z Arachis hypogaea HOM05D006790 ORTHO05D007715 4.8e-24 114.8 116 48.3
Eucgr.I02107 Eucalyptus grandis HOM05D006790 ORTHO05D007715 1.1e-23 113.6 97 56.7
AUR62012471 Chenopodium quinoa HOM05D006790 ORTHO05D007715 4.5e-22 108.2 98 50.0
CANSAT64G1240 Cannabis sativa HOM05D006790 ORTHO05D007715 5.9e-22 107.8 118 44.9
Lj2g0010226 Lotus japonicus HOM05D006790 ORTHO05D007715 7.7e-22 107.5 113 46.9
ATR0691G168 Amborella trichopoda HOM05D006790 ORTHO05D007715 3.0e-18 95.5 121 43.8
Zm00001eb042310 Zea mays HOM05D006790 ORTHO05D007715 2.4e-15 85.9 95 52.6
Oeu049333.1 Olea europaea HOM05D006790 ORTHO05D007715 3.1e-15 85.5 53 64.2
Lj2g0002333 Lotus japonicus HOM05D006790 ORTHO05D007715 5.4e-15 84.7 101 43.6
vmacro05586 Vaccinium macrocarpon HOM05D006790 ORTHO05D007715 1.2e-14 83.6 55 72.7
Nitab4.5_0001324g0030 Nicotiana tabacum HOM05D006790 ORTHO05D007715 5.9e-14 81.3 63 63.5
DCAR_007524 Daucus carota HOM05D000337 ORTHO05D007715 1.7e-13 79.7 64 60.9
CSS0043876 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 8.5e-13 77.4 55 69.1
Peaxi162Scf00019g00411 Petunia axillaris HOM05D006790 ORTHO05D007715 1.9e-12 76.3 54 68.5
Oeu025124.3 Olea europaea HOM05D006790 ORTHO05D007715 1.0e-10 70.5 49 67.3
CiPaw.03G006800 Carya illinoinensis HOM05D006790 ORTHO05D007715 8.8e-10 67.4 54 59.3
Eucgr.I02105 Eucalyptus grandis HOM05D006790 ORTHO05D007715 2.6e-09 65.9 82 45.1
MBI14_g10506_MAGBIO Magnolia biondii HOM05D006790 ORTHO05D007715 3.4e-09 65.5 74 51.4
Mapoly0081s0071 Marchantia polymorpha HOM05D006790 ORTHO05D007715 4.9e-08 61.6 113 33.6
FvH4_6g45660 Fragaria vesca HOM05D006790 ORTHO05D007715 1.1e-07 60.5 41 68.3
FAN05G5467 Fragaria x ananassa HOM05D006790 ORTHO05D007715 1.1e-07 60.5 41 68.3
FAN09G4784 Fragaria x ananassa HOM05D006790 ORTHO05D007715 1.1e-07 60.5 41 68.3
FAN14G5652 Fragaria x ananassa HOM05D006790 ORTHO05D007715 1.1e-07 60.5 41 68.3
SMO141G0131 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 1.1e-07 60.5 113 36.3
SMO170G0045 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 1.1e-07 60.5 113 36.3
Sabra04G0076300 Salix brachista HOM05D001314 ORTHO05D001165 1.2e-06 57.0 47 57.4


User provided reference genes

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