Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 4.0e-134 481.5 250 100.0
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.7e-89 333.2 312 65.1
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.2e-37 161.0 137 63.5
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.2e-37 161.0 137 63.5
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 4.5e-37 159.1 137 62.8
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 9.4e-35 151.4 265 41.9
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 4.7e-34 149.1 133 59.4
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.0e-33 147.9 318 36.8
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.0e-33 147.9 117 64.1
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 3.9e-33 146.0 194 47.4
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 5.2e-33 145.6 152 52.0
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 5.2e-33 145.6 257 42.0
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 5.2e-33 145.6 201 46.8
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 6.7e-33 145.2 150 55.3
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.1e-32 144.4 246 43.1
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 2.6e-32 143.3 98 73.5
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 2.6e-32 143.3 241 41.1
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 2.6e-32 143.3 153 54.9
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 4.4e-32 142.5 138 57.2
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 7.4e-32 141.7 142 54.9
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 9.7e-32 141.4 105 66.7
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.7e-31 140.6 146 53.4
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 4.8e-31 139.0 136 55.9
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 6.3e-31 138.7 159 52.8
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 1.1e-30 137.9 165 51.5
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 1.4e-30 137.5 145 53.8
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 2.4e-30 136.7 251 39.0
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 4.1e-30 136.0 178 46.1
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 5.3e-30 135.6 212 45.8
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 5.3e-30 135.6 241 37.8
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 5.3e-30 135.6 205 43.9
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 5.3e-30 135.6 205 43.9
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 5.3e-30 135.6 215 40.5
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 5.3e-30 135.6 111 63.1
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 7.0e-30 135.2 112 58.0
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.2e-29 134.4 248 39.9
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.2e-29 134.4 215 40.5
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 2.6e-29 133.3 174 47.1
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 3.5e-29 132.9 142 52.8
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 4.5e-29 132.5 204 44.1
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 4.5e-29 132.5 196 45.9
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 5.9e-29 132.1 131 51.9
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 5.9e-29 132.1 150 50.7
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 5.9e-29 132.1 254 36.6
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 7.7e-29 131.7 141 51.8
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.0e-28 131.3 101 61.4
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.0e-28 131.3 150 49.3
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 1.3e-28 131.0 253 40.3
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 1.3e-28 131.0 253 36.8
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 1.3e-28 131.0 248 39.1
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 1.7e-28 130.6 99 65.7
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 1.7e-28 130.6 251 41.4
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 2.2e-28 130.2 246 40.2
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 3.8e-28 129.4 232 38.8
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 3.8e-28 129.4 192 42.2
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 6.5e-28 128.6 140 52.9
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 6.5e-28 128.6 255 39.2
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.1e-27 127.9 250 38.4
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.5e-27 127.5 138 57.2
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 2.5e-27 126.7 131 50.4
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 3.2e-27 126.3 254 36.6
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 4.2e-27 125.9 241 36.5
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 4.2e-27 125.9 287 36.2
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 4.2e-27 125.9 165 44.8
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 5.5e-27 125.6 271 35.1
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 5.5e-27 125.6 122 57.4
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 7.2e-27 125.2 215 37.2
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 7.2e-27 125.2 103 60.2
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 7.2e-27 125.2 226 40.3
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 2.1e-26 123.6 192 40.6
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 2.7e-26 123.2 98 62.2
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 3.6e-26 122.9 251 38.6
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 4.7e-26 122.5 251 38.6
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 6.1e-26 122.1 179 46.4
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 6.1e-26 122.1 192 40.6
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 2.3e-25 120.2 108 53.7
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 3.0e-25 119.8 225 36.9
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 5.2e-25 119.0 166 44.6
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 8.8e-25 118.2 150 46.7
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 8.8e-25 118.2 150 46.7
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 8.8e-25 118.2 197 39.6
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 8.8e-25 118.2 197 39.6
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.5e-24 117.5 179 39.1
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.6e-24 116.7 93 60.2
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.6e-24 116.7 108 56.5
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 5.7e-24 115.5 186 41.4
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 5.7e-24 115.5 113 51.3
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 7.5e-24 115.2 233 39.1
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 9.7e-24 114.8 224 38.4
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.7e-23 114.0 88 67.0
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 1.7e-23 114.0 92 57.6
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.2e-23 113.6 258 34.1
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 2.2e-23 113.6 88 62.5
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 2.2e-23 113.6 143 46.2
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 2.8e-23 113.2 273 35.5
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 3.7e-23 112.8 254 33.5
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 6.3e-23 112.1 258 35.3
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 6.3e-23 112.1 258 35.3
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 6.3e-23 112.1 173 42.8
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 1.1e-22 111.3 249 37.3
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 1.1e-22 111.3 272 34.2
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 1.1e-22 111.3 202 40.6
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.4e-22 110.9 86 64.0
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.4e-22 110.9 262 36.6
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.8e-22 110.5 257 36.6
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 2.4e-22 110.2 110 49.1
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 4.1e-22 109.4 296 33.4
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 1.7e-20 104.0 235 34.5
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 1.7e-20 104.0 237 35.9
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 2.2e-20 103.6 178 40.4
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 3.8e-20 102.8 243 37.9
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 5.0e-20 102.4 204 38.2
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 8.5e-20 101.7 283 31.8
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 1.9e-19 100.5 85 63.5
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 2.5e-19 100.1 201 38.3
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.6e-18 97.4 142 43.0
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 2.1e-18 97.1 234 32.9
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 3.6e-18 96.3 237 34.6
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 4.7e-18 95.9 182 39.6
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 1.0e-17 94.7 246 33.7
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 2.3e-17 93.6 87 55.2
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 5.2e-17 92.4 260 33.5
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 8.8e-17 91.7 246 32.1
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 8.8e-17 91.7 88 52.3
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 2.6e-16 90.1 146 39.7
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 4.4e-16 89.4 83 49.4
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 7.5e-16 88.6 86 50.0
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.4e-14 84.3 74 52.7
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.4e-14 84.3 74 52.7
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 3.1e-14 83.2 74 50.0
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 5.4e-14 82.4 178 32.6
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 2.0e-13 80.5 75 57.3
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 2.7e-13 80.1 85 51.8
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.0e-12 78.2 99 43.4
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 1.5e-11 74.3 72 47.2
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 9.5e-11 71.6 140 35.7
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 1.6e-10 70.9 57 64.9
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 4.7e-10 69.3 184 33.2
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 7.5e-08 62.0 87 35.6


User provided reference genes

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