Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 6.0e-88 327.4 157 100.0
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 2.2e-53 212.6 117 85.5
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 2.8e-53 212.2 117 84.6
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 8.2e-53 210.7 117 82.9
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 4.1e-52 208.4 152 67.8
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 6.9e-52 207.6 117 83.8
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 4.5e-51 204.9 117 82.9
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 5.9e-51 204.5 149 69.8
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 1.7e-50 203.0 118 81.4
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 3.8e-50 201.8 153 64.1
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 5.0e-50 201.4 153 65.4
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 5.0e-50 201.4 117 81.2
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 5.0e-50 201.4 151 66.9
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.1e-49 200.3 153 64.1
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 1.4e-49 199.9 115 81.7
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.9e-49 199.5 153 63.4
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 2.5e-49 199.1 117 79.5
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.5e-49 199.1 117 79.5
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.5e-49 199.1 117 79.5
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 4.2e-49 198.4 117 74.4
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.5e-49 198.0 117 79.5
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.5e-49 198.0 117 79.5
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 9.4e-49 197.2 117 76.1
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 1.2e-48 196.8 117 78.6
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 1.2e-48 196.8 117 80.3
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 1.6e-48 196.4 117 77.8
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 2.1e-48 196.1 117 76.9
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.1e-48 196.1 117 78.6
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 2.1e-48 196.1 117 76.9
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 2.1e-48 196.1 153 62.7
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 2.7e-48 195.7 114 78.9
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 2.7e-48 195.7 119 79.8
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 3.6e-48 195.3 117 77.8
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 6.1e-48 194.5 113 77.9
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 6.1e-48 194.5 117 76.1
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 7.9e-48 194.1 120 75.0
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 1.0e-47 193.7 116 74.1
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 1.0e-47 193.7 117 74.4
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 1.8e-47 193.0 119 76.5
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.8e-47 193.0 119 74.8
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.8e-47 193.0 116 77.6
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.8e-47 193.0 116 77.6
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 2.3e-47 192.6 117 75.2
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 3.0e-47 192.2 117 77.8
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 5.1e-47 191.4 118 76.3
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 8.8e-47 190.7 133 67.7
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.1e-46 190.3 148 61.5
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 1.5e-46 189.9 114 79.8
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 1.5e-46 189.9 120 75.0
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 2.6e-46 189.1 120 73.3
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.6e-46 189.1 113 76.1
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 4.4e-46 188.3 112 77.7
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 5.7e-46 188.0 113 77.9
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 5.7e-46 188.0 120 74.2
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 7.4e-46 187.6 117 74.4
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 9.7e-46 187.2 117 73.5
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 9.7e-46 187.2 113 77.0
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 1.3e-45 186.8 113 75.2
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 1.7e-45 186.4 113 77.0
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 4.8e-45 184.9 112 77.7
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 6.3e-45 184.5 113 74.3
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 6.3e-45 184.5 117 71.8
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 6.3e-45 184.5 117 74.4
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 8.2e-45 184.1 112 78.6
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 8.2e-45 184.1 147 65.3
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 8.2e-45 184.1 113 75.2
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 8.2e-45 184.1 119 71.4
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 1.1e-44 183.7 119 73.1
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 1.8e-44 183.0 152 61.8
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 2.4e-44 182.6 117 70.1
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 3.1e-44 182.2 117 72.6
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 4.1e-44 181.8 112 75.9
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 6.9e-44 181.0 117 73.5
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 9.1e-44 180.6 118 74.6
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.2e-43 180.3 113 74.3
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 1.2e-43 180.3 148 61.5
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 1.2e-43 180.3 109 77.1
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 1.2e-43 180.3 147 60.5
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.2e-43 180.3 119 70.6
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 1.5e-43 179.9 112 74.1
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 4.5e-43 178.3 116 69.8
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 5.9e-43 177.9 116 69.8
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 5.9e-43 177.9 113 73.5
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 7.7e-43 177.6 112 72.3
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 7.7e-43 177.6 112 72.3
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 1.0e-42 177.2 147 59.9
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 1.0e-42 177.2 112 72.3
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 1.0e-42 177.2 112 72.3
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 1.0e-42 177.2 112 72.3
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 1.7e-42 176.4 112 71.4
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 5.0e-42 174.9 117 72.6
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 5.0e-42 174.9 117 72.6
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 8.5e-42 174.1 108 75.0
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.1e-41 173.7 152 59.2
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.4e-41 173.3 147 58.5
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.9e-41 172.9 147 57.1
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 1.9e-41 172.9 112 70.5
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 3.2e-41 172.2 147 57.8
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 3.2e-41 172.2 155 58.7
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 8.8e-39 164.1 112 65.2
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 2.8e-37 159.1 109 64.2
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 3.7e-37 158.7 113 65.5
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 2.4e-36 156.0 115 64.3
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 7.0e-36 154.5 127 60.6
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 3.5e-35 152.1 113 62.8
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 4.2e-33 145.2 116 57.8
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.2e-32 143.7 114 63.2
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 1.6e-32 143.3 110 60.0
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 2.1e-32 142.9 112 58.9
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 4.7e-32 141.7 107 62.6
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 4.0e-31 138.7 81 77.8
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 3.3e-30 135.6 112 54.5
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 2.2e-29 132.9 120 52.5
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 2.4e-28 129.4 109 57.8
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 7.0e-28 127.9 119 51.3
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 9.1e-28 127.5 116 56.0
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 6.5e-26 121.3 112 49.1
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 4.8e-21 105.1 140 42.1
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 2.5e-17 92.8 84 50.0
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 3.4e-14 82.4 75 50.7
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 9.8e-14 80.9 58 62.1
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 9.2e-12 74.3 73 53.4
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 9.2e-12 74.3 73 53.4
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 9.5e-09 64.3 40 65.0
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.8e-07 60.1 62 46.8


User provided reference genes

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