Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A652T76 Lonicera japonica HOM05D003689 ORTHO05D003950 1.9e-132 477.2 628 100.0
Dinv41614 Davidia involucrata HOM05D003689 ORTHO05D003950 5.4e-55 219.9 243 79.4
Hma1.2p1_1151F.1_g262016 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 1.6e-51 208.4 243 77.4
Hma1.2p1_3266F.1_g334670 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 9.6e-44 182.6 208 82.7
GSVIVG01015378001 Vitis vinifera HOM05D003689 ORTHO05D003950 1.2e-43 182.2 243 72.0
HanXRQChr06g0180011 Helianthus annuus HOM05D003689 ORTHO05D003950 6.2e-43 179.9 245 75.1
Nitab4.5_0004562g0020 Nicotiana tabacum HOM05D003689 ORTHO05D003950 8.1e-43 179.5 243 76.1
Cc06_g09790 Coffea canephora HOM05D003689 ORTHO05D003950 1.1e-42 179.1 243 70.8
CAN.G238.2 Capsicum annuum HOM05D003689 ORTHO05D003950 1.8e-42 178.3 243 72.8
Haze_25759 Corylus avellana HOM05D003689 ORTHO05D003950 4.0e-42 177.2 225 74.7
Thecc.09G108800 Theobroma cacao HOM05D003689 ORTHO05D003950 1.2e-41 175.6 230 71.3
Peaxi162Scf00231g00023 Petunia axillaris HOM05D003689 ORTHO05D003950 5.8e-41 173.3 208 80.8
Gorai.010G072200 Gossypium raimondii HOM05D003689 ORTHO05D003950 1.3e-40 172.2 233 70.8
Gohir.A06G063300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 2.2e-40 171.4 233 71.2
Nitab4.5_0000114g0090 Nicotiana tabacum HOM05D003689 ORTHO05D003950 2.2e-40 171.4 217 80.2
Cfa003251 Carpinus fangiana HOM05D003689 ORTHO05D003950 3.2e-39 167.5 230 72.6
Gohir.D06G062000 Gossypium hirsutum HOM05D003689 ORTHO05D003950 1.6e-38 165.2 233 69.5
Rhsim01G0097100 Rhododendron simsii HOM05D003689 ORTHO05D003950 2.7e-38 164.5 243 63.0
Lsat_1_v5_gn_8_95421 Lactuca sativa HOM05D003689 ORTHO05D003950 1.7e-37 161.8 245 74.3
Duzib150G1680 Durio zibethinus HOM05D003689 ORTHO05D003950 6.6e-37 159.8 230 72.2
PGSC0003DMG400024327 Solanum tuberosum HOM05D003689 ORTHO05D003950 8.7e-37 159.5 246 68.7
Eucgr.C03818 Eucalyptus grandis HOM05D003689 ORTHO05D003950 1.5e-36 158.7 228 68.9
THA.LOC104811116 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 1.5e-36 158.7 231 71.4
QL12p026389 Quercus lobata HOM05D003689 ORTHO05D003950 8.1e-35 152.9 243 63.0
Prupe.7G232600 Prunus persica HOM05D003689 ORTHO05D003950 1.1e-34 152.5 208 76.4
TAR624G0802 Trochodendron aralioides HOM05D003689 ORTHO05D003950 2.4e-34 151.4 243 67.1
CANSAT56G1603 Cannabis sativa HOM05D003689 ORTHO05D003950 4.0e-34 150.6 230 72.2
CANSAT56G4471 Cannabis sativa HOM05D003689 ORTHO05D003950 4.0e-34 150.6 230 72.2
Sopen07g016320 Solanum pennellii HOM05D003689 ORTHO05D003950 4.0e-34 150.6 202 77.7
Manes.03G021600 Manihot esculenta HOM05D003689 ORTHO05D003950 1.5e-33 148.7 230 69.6
PSO210G3978 Papaver somniferum HOM05D003689 ORTHO05D003950 1.5e-33 148.7 208 70.7
PSO210G7239 Papaver somniferum HOM05D003689 ORTHO05D003950 2.6e-33 147.9 218 67.9
Sed0017853 Sechium edule HOM05D003689 ORTHO05D003950 1.3e-32 145.6 227 67.4
Ciclev10007776m.g Citrus clementina HOM05D003689 ORTHO05D003950 2.2e-32 144.8 230 66.5
MD15G1183500 Malus domestica HOM05D003689 ORTHO05D003950 2.2e-32 144.8 208 71.2
Cfa013343 Carpinus fangiana HOM05D003689 ORTHO05D003950 6.4e-32 143.3 208 73.1
Glyma.08G038200 Glycine max HOM05D003689 ORTHO05D003950 6.4e-32 143.3 206 72.8
Haze_21848 Corylus avellana HOM05D003689 ORTHO05D003950 8.4e-32 142.9 243 65.0
ClCG06G008630 Citrullus lanatus HOM05D003689 ORTHO05D003950 1.4e-31 142.1 230 65.7
Sc18g0001340 Simmondsia chinensis HOM05D003689 ORTHO05D003950 1.4e-31 142.1 230 65.2
MD08G1118600 Malus domestica HOM05D003689 ORTHO05D003950 4.2e-31 140.6 203 70.9
GSVIVG01035672001 Vitis vinifera HOM05D003689 ORTHO05D003950 4.2e-31 140.6 244 66.0
CSS0016195 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 9.3e-31 139.4 88 77.3
Glyma.05G230700 Glycine max HOM05D003689 ORTHO05D003950 9.3e-31 139.4 223 69.5
FvH4_1g04540 Fragaria vesca HOM05D003689 ORTHO05D003950 1.6e-30 138.7 230 65.7
FAN27G3406 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.6e-30 138.7 228 68.9
MELO3C025352.2 Cucumis melo HOM05D003689 ORTHO05D003950 2.1e-30 138.3 241 63.1
FAN26G3272 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.1e-30 138.3 230 66.1
RcHm_v2.0_Chr2g0090251 Rosa chinensis HOM05D003689 ORTHO05D003950 2.1e-30 138.3 230 65.2
Actinidia32677 Actinidia chinensis HOM05D001279 ORTHO05D003950 2.7e-30 137.9 123 60.2
Cc00_g17700 Coffea canephora HOM05D003689 ORTHO05D003950 2.7e-30 137.9 243 64.6
ECA238G3870 Erigeron canadensis HOM05D003689 ORTHO05D009814 3.5e-30 137.5 234 70.1
FAN15G3321 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.5e-30 137.5 213 72.8
VMungo0331G0581 Vigna mungo HOM05D003689 ORTHO05D003950 3.5e-30 137.5 220 68.6
FvH4_2g36130 Fragaria vesca HOM05D003689 ORTHO05D003950 6.0e-30 136.7 228 68.4
MBI04_g29969_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 6.0e-30 136.7 243 66.3
CsaV3_1G025520 Cucumis sativus L. HOM05D003689 ORTHO05D003950 7.9e-30 136.3 230 65.2
RcHm_v2.0_Chr6g0305741 Rosa chinensis HOM05D003689 ORTHO05D003950 7.9e-30 136.3 228 68.4
CiPaw.07G207300 Carya illinoinensis HOM05D003689 ORTHO05D003950 1.0e-29 136.0 203 72.4
PGR102G1523 Punica granatum HOM05D003689 ORTHO05D003950 1.0e-29 136.0 230 68.7
FAN23G2461 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.3e-29 135.6 191 74.9
CSS0006196 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 1.7e-29 135.2 243 62.6
FAN20G2410 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.7e-29 135.2 228 67.1
FAN28G1273 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.0e-29 134.4 230 64.8
Actinidia32678 Actinidia chinensis HOM05D003689 ORTHO05D003950 5.1e-29 133.7 123 57.7
Phvul.010G165600 Phaseolus vulgaris HOM05D003689 ORTHO05D003950 6.6e-29 133.3 187 76.5
CDE02G3880 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 1.9e-28 131.7 211 65.9
Ciclev10007728m.g Citrus clementina HOM05D003689 ORTHO05D003950 1.9e-28 131.7 243 62.1
Actinidia31220 Actinidia chinensis HOM05D003689 ORTHO05D003950 2.5e-28 131.3 245 59.6
arahy.Tifrunner.gnm1.ann1.EDC6ME Arachis hypogaea HOM05D003689 ORTHO05D003950 3.3e-28 131.0 213 73.2
arahy.Tifrunner.gnm1.ann1.K2CPZ4 Arachis hypogaea HOM05D003689 ORTHO05D003950 3.3e-28 131.0 213 73.2
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 4.3e-28 130.6 176 82.4
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 5.6e-28 130.2 243 43.2
Lalb_Chr05g0222931 Lupinus albus HOM05D003689 ORTHO05D003950 5.6e-28 130.2 226 35.4
arahy.Tifrunner.gnm1.ann1.3U27PV Arachis hypogaea HOM05D003689 ORTHO05D003950 7.3e-28 129.8 237 66.2
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 7.3e-28 129.8 243 65.8
COL.COLO4_34846 Corchorus olitorius HOM05D001279 ORTHO05D001636 1.3e-27 129.0 230 65.7
Prupe.1G452700 Prunus persica HOM05D003689 ORTHO05D003950 1.3e-27 129.0 205 68.8
Sabra18G0038000 Salix brachista HOM05D003689 ORTHO05D003950 1.6e-27 128.6 243 62.1
TWI63G0545 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 1.6e-27 128.6 187 77.5
arahy.Tifrunner.gnm1.ann1.SBHH31 Arachis hypogaea HOM05D003689 ORTHO05D003950 2.1e-27 128.3 210 72.4
Thecc.09G039700 Theobroma cacao HOM05D003689 ORTHO05D003950 3.6e-27 127.5 187 70.6
DCAR_004497 Daucus carota HOM05D003689 ORTHO05D003950 1.1e-26 125.9 184 49.5
MSTRG.6008 Avicennia marina HOM05D003689 ORTHO05D003950 3.1e-26 124.4 100 68.0
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 6.9e-26 123.2 198 36.4
Lalb_Chr16g0388171 Lupinus albus HOM05D003689 ORTHO05D003950 9.0e-26 122.9 231 61.9
Manes.16G066100 Manihot esculenta HOM05D003689 ORTHO05D003950 9.0e-26 122.9 236 61.0
Aqoxy7G03846 Aquilegia oxysepala HOM05D003689 ORTHO05D003950 1.2e-25 122.5 193 76.2
Oeu002241.1 Olea europaea HOM05D003689 ORTHO05D003950 2.0e-25 121.7 165 75.2
MELO3C003585.2 Cucumis melo HOM05D003689 ORTHO05D003950 2.6e-25 121.3 243 44.4
QL02p044325 Quercus lobata HOM05D003689 ORTHO05D003950 2.6e-25 121.3 88 64.8
AT5G21222 Arabidopsis thaliana HOM05D000055 ORTHO05D003950 3.4e-25 120.9 209 65.6
Sp6g23340 Schrenkiella parvula HOM05D000055 ORTHO05D003950 4.5e-25 120.6 209 65.6
Carub.0006s1949 Capsella rubella HOM05D000055 ORTHO05D003950 7.6e-25 119.8 209 65.6
DCAR_012069 Daucus carota HOM05D001279 ORTHO05D001636 1.3e-24 119.0 165 81.8
Nitab4.5_0000052g0100 Nicotiana tabacum HOM05D003689 ORTHO05D003950 2.2e-24 118.2 184 70.7
Hund09215 Selenicereus undatus HOM05D003689 ORTHO05D003950 2.2e-24 118.2 195 65.1
AL6G32800 Arabidopsis lyrata HOM05D000055 ORTHO05D003950 4.9e-24 117.1 209 64.6
CARHR191690 Cardamine hirsuta HOM05D000055 ORTHO05D003950 4.9e-24 117.1 209 65.1
Sabra18G0068800 Salix brachista HOM05D003689 ORTHO05D003950 6.4e-24 116.7 105 57.1
Thhalv10012659m.g Eutrema salsugineum HOM05D000055 ORTHO05D003950 8.4e-24 116.3 184 69.6
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 1.1e-23 115.9 243 61.7
Nitab4.5_0003338g0050 Nicotiana tabacum HOM05D003689 ORTHO05D003950 1.4e-23 115.5 245 57.6
Glyma.14G141800 Glycine max HOM05D003689 ORTHO05D003950 2.4e-23 114.8 206 60.2
Potri.018G037200 Populus trichocarpa HOM05D003689 ORTHO05D003950 2.4e-23 114.8 185 69.7
C09p54880 Brassica napus HOM05D000055 ORTHO05D003950 3.2e-23 114.4 184 70.1
BolC9t58349H Brassica oleracea HOM05D000055 ORTHO05D003950 3.2e-23 114.4 184 70.1
EL10Ac8g18479 Beta vulgaris HOM05D003689 ORTHO05D003950 9.3e-23 112.8 201 68.2
Ah.14g082150 Amaranthus hybridus HOM05D003689 ORTHO05D003950 1.6e-22 112.1 201 67.7
A10p18880 Brassica napus HOM05D000055 ORTHO05D003950 1.6e-22 112.1 184 69.6
BraA10t43967Z Brassica rapa HOM05D000055 ORTHO05D003950 1.6e-22 112.1 184 69.6
Potri.018G081700 Populus trichocarpa HOM05D003689 ORTHO05D003950 1.6e-22 112.1 105 57.1
BcaC04g23586 Brassica carinata HOM05D003689 ORTHO05D003950 4.6e-22 110.5 227 57.7
A09p06120 Brassica napus HOM05D003689 ORTHO05D003950 6.0e-22 110.2 227 57.7
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 6.0e-22 110.2 209 33.5
C09p06740 Brassica napus HOM05D003689 ORTHO05D003950 7.9e-22 109.8 227 57.7
BolC9t53595H Brassica oleracea HOM05D003689 ORTHO05D003950 7.9e-22 109.8 227 57.7
AUR62010979 Chenopodium quinoa HOM05D003689 ORTHO05D003950 7.9e-22 109.8 201 69.2
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 7.9e-22 109.8 229 29.7
BraA09t36253Z Brassica rapa HOM05D003689 ORTHO05D003950 1.3e-21 109.0 227 57.7
AUR62021489 Chenopodium quinoa HOM05D003689 ORTHO05D003950 1.8e-21 108.6 201 68.7
Migut.J01154 Erythranthe guttata HOM05D003689 ORTHO05D003950 1.8e-21 108.6 74 74.3
BcaB04g19771 Brassica carinata HOM05D003689 ORTHO05D003950 2.3e-21 108.2 230 35.7
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 3.0e-21 107.8 186 61.3
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 3.0e-21 107.8 187 33.7
Medtr8g103480 Medicago truncatula HOM05D003689 ORTHO05D003950 8.7e-21 106.3 187 74.9
QL02p045402 Quercus lobata HOM05D003689 ORTHO05D003950 1.5e-20 105.5 76 67.1
Sc23g0005900 Simmondsia chinensis HOM05D003689 ORTHO05D003950 1.5e-20 105.5 184 69.6
THA.LOC104799204 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 1.5e-20 105.5 186 61.3
Thhalv10003915m.g Eutrema salsugineum HOM05D003689 ORTHO05D003950 2.5e-20 104.8 190 41.1
Solyc07g032380.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 2.5e-20 104.8 73 72.6
Lalb_Chr14g0371561 Lupinus albus HOM05D003689 ORTHO05D003950 5.6e-20 103.6 203 64.5
Aa31LG1G13560 Aethionema arabicum HOM05D000055 ORTHO05D003950 2.1e-19 101.7 182 65.4
vmacro20709 Vaccinium macrocarpon HOM05D003689 ORTHO05D003950 2.1e-19 101.7 239 31.4
EL10Ac2g04074 Beta vulgaris HOM05D003689 ORTHO05D003950 2.8e-19 101.3 184 46.7
Duzib187G1779 Durio zibethinus HOM05D003689 ORTHO05D003950 2.8e-19 101.3 187 71.7
CAN.G797.4 Capsicum annuum HOM05D003689 ORTHO05D003950 3.7e-19 100.9 188 72.3
arahy.Tifrunner.gnm1.ann1.Z43HYI Arachis hypogaea HOM05D003689 ORTHO05D003950 4.8e-19 100.5 165 78.2
SGA_v2.0_scaffold163G38088 Striga asiatica HOM05D003689 ORTHO05D003950 4.8e-19 100.5 241 56.0
arahy.Tifrunner.gnm1.ann1.WWE821 Arachis hypogaea HOM05D003689 ORTHO05D003950 6.2e-19 100.1 202 60.9
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 6.2e-19 100.1 186 32.8
Gohir.A08G250800 Gossypium hirsutum HOM05D003689 ORTHO05D003950 8.1e-19 99.8 187 66.8
PGR044G1205 Punica granatum HOM05D003689 ORTHO05D003950 2.4e-18 98.2 166 76.5
Ca_17333_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 3.1e-18 97.8 165 73.9
Lalb_Chr14g0362401 Lupinus albus HOM05D003689 ORTHO05D003950 4.0e-18 97.4 207 60.4
Gohir.D08G272300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 5.3e-18 97.1 187 66.3
Gorai.004G290700 Gossypium raimondii HOM05D003689 ORTHO05D003950 5.3e-18 97.1 187 66.3
TWI34G0694 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 9.0e-18 96.3 99 51.5
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 1.2e-17 95.9 184 30.4
MSTRG.14008 Avicennia marina HOM05D003689 ORTHO05D003950 1.5e-17 95.5 184 68.5
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 2.6e-17 94.7 105 42.9
Medtr1g008310 Medicago truncatula HOM05D003689 ORTHO05D003950 2.6e-17 94.7 206 30.6
EL10Ac8g18465 Beta vulgaris HOM05D003689 ORTHO05D003950 3.4e-17 94.4 202 63.9
EL10Ac8g18466 Beta vulgaris HOM05D003689 ORTHO05D003950 3.4e-17 94.4 202 63.9
arahy.Tifrunner.gnm1.ann1.6C9669 Arachis hypogaea HOM05D003689 ORTHO05D003950 7.6e-17 93.2 202 59.4
Solyc08g068230.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 1.0e-16 92.8 184 63.0
Sopen08g022090 Solanum pennellii HOM05D003689 ORTHO05D003950 1.0e-16 92.8 184 62.5
PGSC0003DMG400014513 Solanum tuberosum HOM05D003689 ORTHO05D003950 1.0e-16 92.8 243 51.9
Ah.16g105250 Amaranthus hybridus HOM05D003689 ORTHO05D003950 1.3e-16 92.4 184 43.5
AUR62009331 Chenopodium quinoa HOM05D003689 ORTHO05D003950 1.3e-16 92.4 184 48.4
Lj4g0026082 Lotus japonicus HOM05D003689 ORTHO05D003950 1.7e-16 92.0 104 45.2
Atru.chr7.2161 Acer truncatum HOM05D003689 ORTHO05D003950 2.2e-16 91.7 177 67.8
AUR62023017 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.2e-16 91.7 184 50.0
Eucgr.C02891 Eucalyptus grandis HOM05D003689 ORTHO05D003950 3.8e-16 90.9 165 73.3
Ca_12812_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 4.9e-16 90.5 206 59.2
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 6.5e-16 90.1 123 42.3
BcaC04g19516 Brassica carinata HOM05D000055 ORTHO05D000057 1.1e-15 89.4 64 64.1
Psat0s586g0040 Pisum sativum HOM05D003689 ORTHO05D003950 3.2e-15 87.8 107 46.7
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 1.8e-13 82.0 167 29.3
EL10Ac8g18468 Beta vulgaris HOM05D003689 ORTHO05D003950 1.9e-12 78.6 171 32.7
Nn7g35992 Nelumbo nucifera HOM05D003689 ORTHO05D003950 1.9e-12 78.6 44 75.0
EL10Ac8g18473 Beta vulgaris HOM05D003689 ORTHO05D003950 2.8e-11 74.7 70 52.9
Cpa.g.sc78.82 Carica papaya HOM05D003689 ORTHO05D003950 6.2e-11 73.6 44 72.7
Os01g0228400 Oryza sativa ssp. japonica HOM05D003689 ORTHO05D003950 6.2e-11 73.6 64 51.6
Migut.E01508 Erythranthe guttata HOM05D003689 ORTHO05D003950 1.4e-10 72.4 43 67.4
EL10Ac8g18472 Beta vulgaris HOM05D003689 ORTHO05D003950 3.1e-10 71.2 42 78.6
Cpa.g.sc23.95 Carica papaya HOM05D003689 ORTHO05D003950 5.8e-09 67.0 41 68.3
MBI04_g43860_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 1.7e-08 65.5 140 32.1
Psat7g013440 Pisum sativum HOM05D003689 ORTHO05D003950 2.2e-08 65.1 42 61.9
MD02G1045100 Malus domestica HOM05D003689 ORTHO05D003950 5.0e-08 63.9 59 49.2
SGA_v2.0_scaffold163G38089 Striga asiatica HOM05D003689 ORTHO05D003950 3.2e-07 61.2 62 46.8
FAN23G2385 Fragaria x ananassa HOM05D003689 ORTHO05D003950 4.6e-06 57.4 134 29.1


User provided reference genes

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