Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A641G78 Lonicera japonica HOM05D002586 ORTHO05D007521 1.8e-59 232.3 108 100.0
Dinv41576 Davidia involucrata HOM05D005850 ORTHO05D007405 2.5e-37 158.7 91 75.8
CSS0035000 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 1.6e-36 156.0 87 75.9
Rhsim03G0244900 Rhododendron simsii HOM05D002586 ORTHO05D007521 1.4e-35 152.9 87 73.6
TAR383G0369 Trochodendron aralioides HOM05D002586 ORTHO05D007521 1.4e-35 152.9 90 73.3
Cfa003292 Carpinus fangiana HOM05D000417 ORTHO05D000342 2.4e-35 152.1 89 73.0
vmacro06194 Vaccinium macrocarpon HOM05D002586 ORTHO05D007521 4.1e-35 151.4 87 73.6
QL02p086119 Quercus lobata HOM05D002586 ORTHO05D007521 9.0e-35 150.2 90 74.4
CSS0041277 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 1.2e-34 149.8 87 73.6
CiPaw.03G235200 Carya illinoinensis HOM05D002586 ORTHO05D007521 2.6e-34 148.7 91 72.5
Haze_25681 Corylus avellana HOM05D002586 ORTHO05D007521 2.6e-34 148.7 89 71.9
GSVIVG01015435001 Vitis vinifera HOM05D000417 ORTHO05D000342 1.3e-33 146.4 86 74.4
ClCG11G002640 Citrullus lanatus HOM05D002586 ORTHO05D007521 2.2e-33 145.6 83 75.9
AUR62011030 Chenopodium quinoa HOM05D002586 ORTHO05D007521 1.1e-32 143.3 81 76.5
AUR62033403 Chenopodium quinoa HOM05D002586 ORTHO05D007521 1.1e-32 143.3 81 76.5
Lsat_1_v5_gn_5_99861 Lactuca sativa HOM05D002586 ORTHO05D007521 1.1e-32 143.3 81 74.1
EL10Ac8g18544 Beta vulgaris HOM05D002586 ORTHO05D007521 1.4e-32 142.9 83 73.5
Hund26118 Selenicereus undatus HOM05D002586 ORTHO05D007521 1.4e-32 142.9 81 74.1
Atru.chr7.1294 Acer truncatum HOM05D000417 ORTHO05D000342 5.5e-32 141.0 91 70.3
HanXRQChr10g0317371 Helianthus annuus HOM05D002586 ORTHO05D007521 5.5e-32 141.0 81 70.4
Peaxi162Scf00560g00619 Petunia axillaris HOM05D002586 ORTHO05D007521 5.5e-32 141.0 77 79.2
Hma1.2p1_1968F.1_g309480 Hydrangea macrophylla HOM05D002586 ORTHO05D007521 7.2e-32 140.6 89 66.3
Thecc.09G114900 Theobroma cacao HOM05D002586 ORTHO05D007521 9.3e-32 140.2 81 76.5
CsaV3_2G002470 Cucumis sativus L. HOM05D002586 ORTHO05D007521 1.2e-31 139.8 83 71.1
Sed0019430 Sechium edule HOM05D002586 ORTHO05D007521 1.2e-31 139.8 83 69.9
COL.COLO4_34935 Corchorus olitorius HOM05D002586 ORTHO05D007521 1.6e-31 139.4 83 74.7
Manes.03G068300 Manihot esculenta HOM05D002586 ORTHO05D007521 1.6e-31 139.4 81 74.1
CAN.G444.6 Capsicum annuum HOM05D002586 ORTHO05D007521 2.1e-31 139.0 80 75.0
Manes.16G065000 Manihot esculenta HOM05D002586 ORTHO05D007521 2.1e-31 139.0 82 76.8
Solyc05g006200.4 Solanum lycopersicum HOM05D002586 ORTHO05D007521 2.1e-31 139.0 80 72.5
Sopen05g002210 Solanum pennellii HOM05D002586 ORTHO05D007521 2.1e-31 139.0 80 72.5
PGSC0003DMG402015580 Solanum tuberosum HOM05D002586 ORTHO05D007521 2.1e-31 139.0 80 72.5
DCAR_028731 Daucus carota HOM05D002250 ORTHO05D007521 2.7e-31 138.7 77 76.6
Duzib187G1530 Durio zibethinus HOM05D002586 ORTHO05D007521 2.7e-31 138.7 81 76.5
Sabra18G0064400 Salix brachista HOM05D002586 ORTHO05D007521 2.7e-31 138.7 85 71.8
CARHR166270 Cardamine hirsuta HOM05D002586 ORTHO05D007521 3.6e-31 138.3 81 76.5
Gohir.A06G060550 Gossypium hirsutum HOM05D000417 ORTHO05D007521 6.1e-31 137.5 85 72.9
HanXRQChr12g0355841 Helianthus annuus HOM05D002586 ORTHO05D007521 7.9e-31 137.1 79 70.9
ECA234G2455 Erigeron canadensis HOM05D000417 ORTHO05D007521 1.0e-30 136.7 79 70.9
Hma1.2p1_1968F.1_g309470 Hydrangea macrophylla HOM05D002586 ORTHO05D007521 1.0e-30 136.7 81 71.6
Nitab4.5_0000066g0020 Nicotiana tabacum HOM05D002586 ORTHO05D007521 1.0e-30 136.7 80 72.5
PGR142G2078 Punica granatum HOM05D002586 ORTHO05D007521 1.0e-30 136.7 91 70.3
FvH4_1g05380 Fragaria vesca HOM05D002586 ORTHO05D007521 1.4e-30 136.3 81 79.0
Gorai.010G068800 Gossypium raimondii HOM05D000417 ORTHO05D000342 1.4e-30 136.3 85 71.8
RcHm_v2.0_Chr2g0091071 Rosa chinensis HOM05D002586 ORTHO05D007521 1.4e-30 136.3 79 79.7
THA.LOC104811104 Tarenaya hassleriana HOM05D002586 ORTHO05D007521 1.4e-30 136.3 81 75.3
CANSAT56G1449 Cannabis sativa HOM05D002586 ORTHO05D007521 1.8e-30 136.0 74 78.4
Aa31LG10G11030 Aethionema arabicum HOM05D002586 ORTHO05D007521 2.3e-30 135.6 81 75.3
BolC8t50763H Brassica oleracea HOM05D002586 ORTHO05D007521 2.3e-30 135.6 100 65.0
Lalb_Chr08g0235011 Lupinus albus HOM05D002586 ORTHO05D007521 2.3e-30 135.6 82 73.2
AT3G56120 Arabidopsis thaliana HOM05D002586 ORTHO05D007521 3.9e-30 134.8 81 74.1
Cc10_g11950 Coffea canephora HOM05D002586 ORTHO05D007521 3.9e-30 134.8 77 75.3
MBI01_g20396_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007521 5.1e-30 134.4 89 66.3
MD02G1062400 Malus domestica HOM05D002586 ORTHO05D007521 5.1e-30 134.4 74 79.7
arahy.Tifrunner.gnm1.ann1.0DQ71P Arachis hypogaea HOM05D002586 ORTHO05D007521 6.7e-30 134.0 83 71.1
BcaC07g39927 Brassica carinata HOM05D002586 ORTHO05D007521 6.7e-30 134.0 82 74.4
Sp5g06410 Schrenkiella parvula HOM05D002586 ORTHO05D007521 6.7e-30 134.0 81 75.3
Potri.018G072200 Populus trichocarpa HOM05D002586 ORTHO05D007521 8.8e-30 133.7 88 69.3
BcaB01g00029 Brassica carinata HOM05D002586 ORTHO05D007521 1.1e-29 133.3 81 74.1
FAN19G1865 Fragaria x ananassa HOM05D002586 ORTHO05D007521 1.1e-29 133.3 81 77.8
A09p49100 Brassica napus HOM05D002586 ORTHO05D007521 1.5e-29 132.9 81 72.8
BraA09t40362Z Brassica rapa HOM05D002586 ORTHO05D007521 1.5e-29 132.9 81 72.8
Ca_02541_v3 Cicer arietinum L. HOM05D002586 ORTHO05D007521 1.5e-29 132.9 83 74.7
SalBow1G1951 Salvia bowleyana HOM05D002586 ORTHO05D007521 1.9e-29 132.5 90 66.7
AL5G37440 Arabidopsis lyrata HOM05D002586 ORTHO05D007521 2.5e-29 132.1 81 72.8
arahy.Tifrunner.gnm1.ann1.7815EC Arachis hypogaea HOM05D002586 ORTHO05D007521 2.5e-29 132.1 83 69.9
Glyma.17G120833 Glycine max HOM05D002586 ORTHO05D007521 2.5e-29 132.1 83 72.3
Sc18g0001020 Simmondsia chinensis HOM05D002586 ORTHO05D007521 2.5e-29 132.1 88 63.6
Psat4g043160 Pisum sativum HOM05D002586 ORTHO05D007521 3.3e-29 131.7 92 67.4
Lj4g0022349 Lotus japonicus HOM05D002586 ORTHO05D007521 5.7e-29 131.0 83 71.1
Lalb_Chr21g0316611 Lupinus albus HOM05D002586 ORTHO05D007521 5.7e-29 131.0 82 72.0
Oeu034436.1 Olea europaea HOM05D000066 ORTHO05D000055 7.4e-29 130.6 77 71.4
Eucgr.C01077 Eucalyptus grandis HOM05D002586 ORTHO05D007521 9.7e-29 130.2 92 63.0
FAN26G0906 Fragaria x ananassa HOM05D002586 ORTHO05D007521 9.7e-29 130.2 79 77.2
FAN26G3367 Fragaria x ananassa HOM05D002586 ORTHO05D007521 9.7e-29 130.2 79 77.2
Glyma.05G012700 Glycine max HOM05D002586 ORTHO05D007521 9.7e-29 130.2 83 72.3
MELO3C004542.2 Cucumis melo HOM05D002586 ORTHO05D007521 1.3e-28 129.8 98 60.2
ATR0605G072 Amborella trichopoda HOM05D002586 ORTHO05D007521 2.8e-28 128.6 87 64.4
DCAR_016972 Daucus carota HOM05D002586 ORTHO05D007521 2.8e-28 128.6 81 65.4
FAN23G1201 Fragaria x ananassa HOM05D000417 ORTHO05D007521 2.8e-28 128.6 84 70.2
Carub.0005s2287 Capsella rubella HOM05D002586 ORTHO05D007521 4.8e-28 127.9 81 71.6
Thhalv10005971m.g Eutrema salsugineum HOM05D002586 ORTHO05D007521 4.8e-28 127.9 81 70.4
PSO210G4513 Papaver somniferum HOM05D002586 ORTHO05D007521 6.3e-28 127.5 81 67.9
TPR.G26750 Trifolium pratense HOM05D002586 ORTHO05D007521 3.1e-27 125.2 86 68.6
Medtr4g112015 Medicago truncatula HOM05D002586 ORTHO05D007521 4.1e-27 124.8 86 67.4
TWI34G1303 Tripterygium wilfordii HOM05D002586 ORTHO05D007521 5.3e-27 124.4 119 53.8
PSO170G5904 Papaver somniferum HOM05D002586 ORTHO05D007521 9.1e-27 123.6 81 65.4
Phvul.003G176601 Phaseolus vulgaris HOM05D002586 ORTHO05D007521 9.1e-27 123.6 75 73.3
Zm00001eb184100 Zea mays HOM05D002586 ORTHO05D007521 1.5e-26 122.9 90 61.1
Cpa.g.sc23.143 Carica papaya HOM05D002586 ORTHO05D007521 1.0e-25 120.2 90 61.1
Migut.D02058 Erythranthe guttata HOM05D002586 ORTHO05D007521 3.8e-25 118.2 93 58.1
unitig_46.g18492 Utricularia gibba HOM05D002586 ORTHO05D007521 6.5e-25 117.5 75 62.7
Nn7g36037 Nelumbo nucifera HOM05D002586 ORTHO05D007521 4.2e-24 114.8 99 56.6
Aqoxy4G02394 Aquilegia oxysepala HOM05D002586 ORTHO05D007521 7.2e-24 114.0 78 64.1
Ciclev10007363m.g Citrus clementina HOM05D000417 ORTHO05D000342 1.6e-23 112.8 65 75.4
Prupe.7G227000 Prunus persica HOM05D000417 ORTHO05D000342 1.6e-23 112.8 65 75.4
HPP92_026033 Vanilla planifolia HOM05D002586 ORTHO05D007521 7.9e-23 110.5 81 63.0
arahy.Tifrunner.gnm1.ann1.79CRDV Arachis hypogaea HOM05D002586 ORTHO05D007521 5.1e-22 107.8 65 72.3
C08p31420 Brassica napus HOM05D002586 ORTHO05D007521 2.0e-21 105.9 63 73.0
CDE05G1766 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 2.6e-21 105.5 63 66.7
arahy.Tifrunner.gnm1.ann1.QVF5JZ Arachis hypogaea HOM05D002586 ORTHO05D007521 3.7e-20 101.7 66 68.2
C04p36410 Brassica napus HOM05D002586 ORTHO05D007521 1.1e-19 100.1 86 60.5
BolC4t25154H Brassica oleracea HOM05D002586 ORTHO05D007521 1.1e-19 100.1 86 60.5
Mapoly0022s0148 Marchantia polymorpha HOM05D002586 ORTHO05D007521 4.1e-19 98.2 84 52.4
AagrBONN_evm.TU.Sc2ySwM_344.2815 Anthoceros agrestis HOM05D002586 ORTHO05D007521 9.4e-16 87.0 86 43.0
Pp3c17_17170 Physcomitrium patens HOM05D002586 ORTHO05D007521 9.4e-16 87.0 75 49.3
Actinidia17483 Actinidia chinensis HOM05D002586 ORTHO05D007521 2.1e-15 85.9 65 67.7
CBR_g154 Chara braunii HOM05D002586 ORTHO05D007521 3.9e-14 81.6 81 45.7
MCO08G012 Micromonas commoda HOM05D002586 ORTHO05D007521 2.0e-13 79.3 88 46.6
Ah.09g227010 Amaranthus hybridus HOM05D002586 ORTHO05D007521 1.3e-12 76.6 42 78.6
Cre16.g672041 Chlamydomonas reinhardtii HOM05D002586 ORTHO05D007521 1.7e-12 76.3 84 44.0
SGA_v2.0_scaffold1G00550 Striga asiatica HOM05D002586 ORTHO05D007521 1.7e-12 76.3 39 87.2
Nitab4.5_0000005g0480 Nicotiana tabacum HOM05D002586 ORTHO05D007521 5.3e-11 71.2 41 75.6
SalBow7G1800 Salvia bowleyana HOM05D002586 ORTHO05D007521 3.5e-10 68.6 63 58.7
Gohir.D06G058900 Gossypium hirsutum HOM05D002586 ORTHO05D007521 8.5e-09 63.9 40 62.5
SEGI_24830 Sequoiadendron giganteum HOM05D002586 ORTHO05D007521 8.5e-09 63.9 42 66.7
CBR_g34149 Chara braunii HOM05D002586 ORTHO05D007009 7.2e-08 60.8 82 37.8
Nn1g06830 Nelumbo nucifera HOM05D002586 ORTHO05D007009 4.0e-06 55.1 83 38.6
AUR62011185 Chenopodium quinoa HOM05D000191 ORTHO05D000122 5.2e-06 54.7 27 85.2
unitig_85.g27402 Utricularia gibba HOM05D002586 ORTHO05D007009 5.2e-06 54.7 81 35.8
Actinidia38161 Actinidia chinensis HOM05D002586 ORTHO05D007521 6.7e-06 54.3 55 52.7


User provided reference genes

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