Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A637G71 Lonicera japonica HOM05D006405 ORTHO05D007943 2.2e-48 195.3 95 100.0
Rhsim01G0089400 Rhododendron simsii HOM05D006405 ORTHO05D007943 8.0e-11 70.5 98 46.9
Actinidia09391 Actinidia chinensis HOM05D006405 ORTHO05D007943 4.0e-10 68.2 33 90.9
vmacro20684 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 4.0e-10 68.2 33 90.9
vmacro23165 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 4.0e-10 68.2 33 90.9
vmacro23455 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 4.0e-10 68.2 33 90.9
Actinidia26418 Actinidia chinensis HOM05D000063 ORTHO05D001671 3.4e-09 65.1 33 84.8
CiPaw.03G237400 Carya illinoinensis HOM05D006405 ORTHO05D007943 3.4e-09 65.1 33 87.9
Ca_21716_v3 Cicer arietinum L. HOM05D006405 ORTHO05D007943 5.7e-09 64.3 83 49.4
Hma1.2p1_0018F.1_g012980 Hydrangea macrophylla HOM05D006405 ORTHO05D007943 5.7e-09 64.3 33 84.8
Nn2g11875 Nelumbo nucifera HOM05D006405 ORTHO05D007943 1.7e-08 62.8 76 48.7
ATR0083G066 Amborella trichopoda HOM05D006405 ORTHO05D007943 2.2e-08 62.4 50 62.0
Duzib168G0125 Durio zibethinus HOM05D006405 ORTHO05D007943 2.2e-08 62.4 33 84.8
Gohir.A05G020600 Gossypium hirsutum HOM05D006405 ORTHO05D007943 2.2e-08 62.4 33 84.8
Gorai.009G022000 Gossypium raimondii HOM05D006405 ORTHO05D007943 2.2e-08 62.4 33 84.8
MBI04_g43150_MAGBIO Magnolia biondii HOM05D006405 ORTHO05D007943 2.2e-08 62.4 60 55.0
MBI04_g46125_MAGBIO Magnolia biondii HOM05D006405 ORTHO05D007943 2.2e-08 62.4 60 55.0
Thecc.09G118300 Theobroma cacao HOM05D006405 ORTHO05D007943 2.2e-08 62.4 33 84.8
HPP92_008701 Vanilla planifolia HOM05D006405 ORTHO05D007943 2.2e-08 62.4 36 77.8
GSVIVG01015463001 Vitis vinifera HOM05D006405 ORTHO05D007943 2.2e-08 62.4 83 47.0
Atru.chr7.1266 Acer truncatum HOM05D006405 ORTHO05D007943 2.8e-08 62.0 76 52.6
Manes.14G127600 Manihot esculenta HOM05D006405 ORTHO05D007943 2.8e-08 62.0 33 78.8
TAR636G3075 Trochodendron aralioides HOM05D006405 ORTHO05D007943 2.8e-08 62.0 66 53.0
Dinv36586 Davidia involucrata HOM05D006405 ORTHO05D007943 3.7e-08 61.6 33 78.8
Gohir.D05G021700 Gossypium hirsutum HOM05D006405 ORTHO05D007943 3.7e-08 61.6 82 50.0
Sc08g0006960 Simmondsia chinensis HOM05D006405 ORTHO05D007943 3.7e-08 61.6 49 63.3
CSS0000400 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 6.3e-08 60.8 80 48.8
CSS0009020 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 6.3e-08 60.8 80 48.8
RcHm_v2.0_Chr2g0089591 Rosa chinensis HOM05D006405 ORTHO05D007943 6.3e-08 60.8 82 45.1
Actinidia07445 Actinidia chinensis HOM05D006405 ORTHO05D007943 8.3e-08 60.5 32 78.1
Lsat_1_v5_gn_7_42660 Lactuca sativa HOM05D006405 ORTHO05D007943 1.1e-07 60.1 83 45.8
Eucgr.L02381 Eucalyptus grandis HOM05D006405 ORTHO05D007943 1.4e-07 59.7 33 78.8
DCAR_017855 Daucus carota HOM05D006405 ORTHO05D007943 1.8e-07 59.3 33 78.8
QL02p086599 Quercus lobata HOM05D006405 ORTHO05D007943 1.8e-07 59.3 33 78.8
COL.COLO4_34973 Corchorus olitorius HOM05D006405 ORTHO05D007943 2.4e-07 58.9 72 51.4
Sed0007503 Sechium edule HOM05D006405 ORTHO05D007943 3.1e-07 58.5 83 48.2
Ciclev10008764m.g Citrus clementina HOM05D006405 ORTHO05D007943 5.4e-07 57.8 64 56.2
MELO3C004534.2 Cucumis melo HOM05D006405 ORTHO05D007943 7.0e-07 57.4 33 75.8
CsaV3_2G002560 Cucumis sativus L. HOM05D006405 ORTHO05D007943 7.0e-07 57.4 33 75.8
Duzib150G0454 Durio zibethinus HOM05D006405 ORTHO05D007943 7.0e-07 57.4 64 54.7
Glyma.17G119500 Glycine max HOM05D006405 ORTHO05D007943 7.0e-07 57.4 33 78.8
HanXRQChr03g0062171 Helianthus annuus HOM05D006405 ORTHO05D007943 7.0e-07 57.4 33 75.8
Potri.018G074100 Populus trichocarpa HOM05D006405 ORTHO05D007943 7.0e-07 57.4 86 41.9
Psat4g042200 Pisum sativum HOM05D006405 ORTHO05D007943 9.2e-07 57.0 33 78.8
SEGI_03053 Sequoiadendron giganteum HOM05D006405 ORTHO05D007943 9.2e-07 57.0 65 50.8
Aqoxy7G01949 Aquilegia oxysepala HOM05D006405 ORTHO05D007943 1.2e-06 56.6 68 47.1
Cfa012812 Carpinus fangiana HOM05D006405 ORTHO05D007943 1.2e-06 56.6 33 75.8
AUR62033428 Chenopodium quinoa HOM05D006405 ORTHO05D007943 1.2e-06 56.6 87 41.4
ClCG11G002710 Citrullus lanatus HOM05D006405 ORTHO05D007943 1.2e-06 56.6 33 75.8
Haze_25659 Corylus avellana HOM05D006405 ORTHO05D007943 1.2e-06 56.6 33 75.8
Glyma.05G011400 Glycine max HOM05D006405 ORTHO05D007943 1.2e-06 56.6 33 78.8
Hund09164 Selenicereus undatus HOM05D006405 ORTHO05D007943 1.2e-06 56.6 69 44.9
TPR.G26771 Trifolium pratense HOM05D006405 ORTHO05D007943 1.2e-06 56.6 36 75.0
Dinv41556 Davidia involucrata HOM05D006405 ORTHO05D007943 1.6e-06 56.2 33 75.8
Nitab4.5_0001719g0050 Nicotiana tabacum HOM05D006405 ORTHO05D007943 1.6e-06 56.2 87 42.5
Phvul.003G159900 Phaseolus vulgaris HOM05D006405 ORTHO05D007943 2.0e-06 55.8 33 75.8
PGR142G3933 Punica granatum HOM05D006405 ORTHO05D007943 2.0e-06 55.8 86 46.5
TWI32G1134 Tripterygium wilfordii HOM05D006405 ORTHO05D007943 2.0e-06 55.8 60 53.3
Lj4g0015100 Lotus japonicus HOM05D006405 ORTHO05D007943 2.7e-06 55.5 63 50.8
PSO170G5697 Papaver somniferum HOM05D006405 ORTHO05D007943 2.7e-06 55.5 82 47.6
VMungo1215G0522 Vigna mungo HOM05D006405 ORTHO05D007943 2.7e-06 55.5 33 78.8
Migut.K00484 Erythranthe guttata HOM05D006405 ORTHO05D007943 3.5e-06 55.1 82 41.5
Nitab4.5_0000432g0020 Nicotiana tabacum HOM05D006405 ORTHO05D007943 3.5e-06 55.1 87 41.4
Sabra18G0062700 Salix brachista HOM05D006405 ORTHO05D007943 3.5e-06 55.1 33 69.7
ECA240G0175 Erigeron canadensis HOM05D006405 ORTHO05D007943 4.5e-06 54.7 33 72.7
MELO3C030806.2 Cucumis melo HOM05D006405 ORTHO05D007943 5.9e-06 54.3 33 69.7
Nn8g39326 Nelumbo nucifera HOM05D006405 ORTHO05D007943 5.9e-06 54.3 84 39.3
Medtr4g113150 Medicago truncatula HOM05D006405 ORTHO05D007943 7.8e-06 53.9 83 43.4


User provided reference genes

Program Settings