Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A617T74 Lonicera japonica HOM05D004735 ORTHO05D005243 0.0e+00 1318.9 679 100.0
Dinv25616 Davidia involucrata HOM05D004735 ORTHO05D005243 7.5e-204 714.5 708 59.5
Hma1.2p1_0421F.1_g149860 Hydrangea macrophylla HOM05D004735 ORTHO05D005243 6.2e-174 615.1 695 52.8
Actinidia37716 Actinidia chinensis HOM05D004735 ORTHO05D005243 1.5e-167 594.0 712 52.0
CSS0022550 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.3e-163 580.9 715 49.2
Rhsim08G0038800 Rhododendron simsii HOM05D004735 ORTHO05D005243 2.3e-144 516.9 704 46.2
Oeu035383.1 Olea europaea HOM05D004735 ORTHO05D005243 9.7e-143 511.5 700 44.1
vmacro18383 Vaccinium macrocarpon HOM05D004735 ORTHO05D005243 3.0e-136 490.0 717 44.5
Cfa007143 Carpinus fangiana HOM05D004735 ORTHO05D005243 4.1e-133 479.6 709 45.0
Duzib264G0086 Durio zibethinus HOM05D004735 ORTHO05D005243 1.4e-128 464.5 695 44.3
Haze_14980 Corylus avellana HOM05D004735 ORTHO05D005243 2.3e-128 463.8 731 43.8
Prupe.3G314000 Prunus persica HOM05D004735 ORTHO05D005243 2.0e-127 460.7 693 44.7
QL02p069299 Quercus lobata HOM05D004735 ORTHO05D005243 2.6e-127 460.3 767 42.4
Duzib147G0188 Durio zibethinus HOM05D004735 ORTHO05D005243 2.8e-126 456.8 695 43.5
DCAR_014465 Daucus carota HOM05D004735 ORTHO05D005243 3.7e-126 456.4 702 41.2
Thecc.04G048500 Theobroma cacao HOM05D004735 ORTHO05D005243 1.4e-125 454.5 695 41.4
SalBow4G2972 Salvia bowleyana HOM05D004735 ORTHO05D005243 5.9e-124 449.1 727 41.0
Dinv33275 Davidia involucrata HOM05D004735 ORTHO05D005243 5.5e-122 442.6 454 59.3
GSVIVG01032979001 Vitis vinifera HOM05D004735 ORTHO05D005243 5.2e-120 436.0 557 47.9
CiPaw.03G001400 Carya illinoinensis HOM05D004735 ORTHO05D005243 6.8e-120 435.6 691 43.1
COL.COLO4_13380 Corchorus olitorius HOM05D004735 ORTHO05D005243 1.3e-118 431.4 687 40.5
Migut.F00010 Erythranthe guttata HOM05D004735 ORTHO05D005243 3.7e-118 429.9 733 40.7
Duzib187G1028 Durio zibethinus HOM05D004735 ORTHO05D005243 2.9e-115 420.2 697 41.8
MD09G1002200 Malus domestica HOM05D004735 ORTHO05D005243 1.6e-113 414.5 692 43.2
RcHm_v2.0_Chr2g0176561 Rosa chinensis HOM05D004735 ORTHO05D005243 4.7e-113 412.9 693 41.6
Atru.chr6.2700 Acer truncatum HOM05D004735 ORTHO05D005243 3.0e-112 410.2 711 40.8
MSTRG.24121 Avicennia marina HOM05D004735 ORTHO05D005243 1.2e-111 408.3 702 38.9
Nitab4.5_0000519g0300 Nicotiana tabacum HOM05D004735 ORTHO05D005243 8.3e-110 402.1 782 37.0
CiPaw.04G001000 Carya illinoinensis HOM05D004735 ORTHO05D005243 1.1e-109 401.7 686 40.2
Gorai.007G073000 Gossypium raimondii HOM05D004735 ORTHO05D005243 1.8e-109 401.0 694 41.2
Manes.04G093600 Manihot esculenta HOM05D004735 ORTHO05D005243 3.2e-109 400.2 742 38.0
Nitab4.5_0002172g0170 Nicotiana tabacum HOM05D004735 ORTHO05D005243 2.7e-108 397.1 749 37.5
MD17G1006400 Malus domestica HOM05D004735 ORTHO05D005243 3.5e-108 396.7 689 41.1
Gohir.D11G068200 Gossypium hirsutum HOM05D004735 ORTHO05D005243 5.0e-107 392.9 694 40.8
Manes.11G076100 Manihot esculenta HOM05D004735 ORTHO05D005243 6.6e-107 392.5 712 37.8
FAN02G4354 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.5e-106 391.3 702 39.6
Nn4g22117 Nelumbo nucifera HOM05D004735 ORTHO05D005243 3.3e-106 390.2 696 38.1
Ciclev10014280m.g Citrus clementina HOM05D004735 ORTHO05D005243 4.3e-106 389.8 741 38.3
FAN05G2416 Fragaria x ananassa HOM05D004735 ORTHO05D005243 9.5e-106 388.7 702 39.5
CANSAT64G0702 Cannabis sativa HOM05D004735 ORTHO05D005243 6.2e-105 386.0 711 36.3
TAR629G0422 Trochodendron aralioides HOM05D004735 ORTHO05D005243 1.8e-104 384.4 712 39.2
FAN09G0836 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.5e-103 381.3 697 39.0
FvH4_6g54340 Fragaria vesca HOM05D004735 ORTHO05D005243 2.6e-103 380.6 697 39.0
Sabra02G0181300 Salix brachista HOM05D004735 ORTHO05D005243 3.4e-103 380.2 705 39.6
FAN14G4878 Fragaria x ananassa HOM05D004735 ORTHO05D005243 2.9e-102 377.1 697 38.9
CAN.G473.160 Capsicum annuum HOM05D004735 ORTHO05D005243 4.9e-102 376.3 783 35.9
Sopen02g039210 Solanum pennellii HOM05D004735 ORTHO05D005243 6.4e-102 375.9 755 36.0
Potri.002G237800 Populus trichocarpa HOM05D004735 ORTHO05D005243 3.2e-101 373.6 717 39.1
Gohir.A10G069900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 7.0e-101 372.5 702 38.9
TWI32G0607 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 9.2e-101 372.1 696 37.1
Gorai.011G088500 Gossypium raimondii HOM05D004735 ORTHO05D005243 2.0e-100 370.9 702 38.5
Gohir.D10G081300 Gossypium hirsutum HOM05D004735 ORTHO05D005243 1.0e-99 368.6 702 38.3
Potri.014G144100 Populus trichocarpa HOM05D004735 ORTHO05D005243 1.3e-99 368.2 741 37.8
Gohir.A11G063900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 3.9e-99 366.7 622 41.5
Oeu035273.1 Olea europaea HOM05D004735 ORTHO05D005243 3.9e-99 366.7 672 38.1
VMungo0464G0888 Vigna mungo HOM05D004735 ORTHO05D005243 5.0e-99 366.3 771 34.4
Peaxi162Scf00420g00844 Petunia axillaris HOM05D004735 ORTHO05D005243 1.6e-97 361.3 807 32.5
Cpa.g.sc70.59 Carica papaya HOM05D004735 ORTHO05D005243 2.8e-97 360.5 721 38.7
Glyma.16G147800 Glycine max HOM05D004735 ORTHO05D005243 2.3e-96 357.5 792 33.2
Lj2g0010549 Lotus japonicus HOM05D004735 ORTHO05D005243 1.5e-95 354.8 721 35.8
Hund12196 Selenicereus undatus HOM05D004735 ORTHO05D005243 2.0e-95 354.4 735 38.0
Solyc02g094540.4 Solanum lycopersicum HOM05D004735 ORTHO05D005243 2.6e-95 354.0 769 34.3
Lj1g0021966 Lotus japonicus HOM05D004735 ORTHO05D005243 1.4e-93 348.2 691 35.7
Sabra14G0108800 Salix brachista HOM05D004735 ORTHO05D005243 1.4e-93 348.2 716 37.7
Sc03g0005270 Simmondsia chinensis HOM05D004735 ORTHO05D005243 7.1e-93 345.9 753 34.9
EL10Ac3g06356 Beta vulgaris HOM05D004735 ORTHO05D005243 1.6e-92 344.7 778 35.3
Psat0s787g0080 Pisum sativum HOM05D004735 ORTHO05D005243 2.1e-92 344.4 745 34.4
Medtr6g033235 Medicago truncatula HOM05D004735 ORTHO05D005243 5.1e-91 339.7 748 33.4
TWI60G1686 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 5.1e-91 339.7 695 37.0
Ca_16589_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 4.0e-88 330.1 747 32.5
Phvul.004G069600 Phaseolus vulgaris HOM05D004735 ORTHO05D005243 3.4e-87 327.0 790 32.0
Lalb_Chr21g0316971 Lupinus albus HOM05D004735 ORTHO05D005243 2.9e-86 323.9 813 31.9
Glyma.02G066700 Glycine max HOM05D004735 ORTHO05D005243 6.4e-86 322.8 750 33.5
arahy.Tifrunner.gnm1.ann1.X964XN Arachis hypogaea HOM05D004735 ORTHO05D005243 1.6e-84 318.2 723 35.7
Lalb_Chr22g0359831 Lupinus albus HOM05D004735 ORTHO05D005243 4.6e-84 316.6 624 36.2
arahy.Tifrunner.gnm1.ann1.HAHJ6R Arachis hypogaea HOM05D004735 ORTHO05D005243 1.7e-83 314.7 746 35.1
Lsat_1_v5_gn_3_104900 Lactuca sativa HOM05D004735 ORTHO05D005243 5.1e-83 313.2 690 37.4
Eucgr.G01927 Eucalyptus grandis HOM05D004735 ORTHO05D005243 2.5e-82 310.8 787 31.9
Cc07_g01350 Coffea canephora HOM05D004735 ORTHO05D005243 4.3e-82 310.1 414 43.2
Medtr7g084170 Medicago truncatula HOM05D004735 ORTHO05D005243 1.2e-79 302.0 771 31.4
Psat3g093080 Pisum sativum HOM05D004735 ORTHO05D005243 1.2e-79 302.0 844 31.0
PGSC0003DMG400020237 Solanum tuberosum HOM05D004735 ORTHO05D005243 9.9e-79 298.9 467 38.8
CsaV3_5G024940 Cucumis sativus L. HOM05D004735 ORTHO05D005243 2.4e-77 294.3 788 31.1
Lalb_Chr02g0156851 Lupinus albus HOM05D004735 ORTHO05D005243 4.2e-77 293.5 815 32.1
AUR62030086 Chenopodium quinoa HOM05D004735 ORTHO05D005243 4.6e-76 290.0 861 29.7
AUR62038220 Chenopodium quinoa HOM05D004735 ORTHO05D005243 6.6e-75 286.2 837 31.1
HanXRQChr17g0550891 Helianthus annuus HOM05D004735 ORTHO05D005243 2.8e-73 280.8 659 35.2
ECA246G4565 Erigeron canadensis HOM05D004735 ORTHO05D005243 1.5e-71 275.0 683 34.1
ClCG01G007860 Citrullus lanatus HOM05D004735 ORTHO05D005243 2.6e-71 274.2 805 29.8
Ah.13g074210 Amaranthus hybridus HOM05D004735 ORTHO05D005243 1.3e-70 271.9 808 31.7
MELO3C005100.2 Cucumis melo HOM05D004735 ORTHO05D005243 4.9e-70 270.0 790 30.4
HanXRQChr15g0475721 Helianthus annuus HOM05D004735 ORTHO05D005243 8.4e-70 269.2 676 33.0
TPR.G15417 Trifolium pratense HOM05D004735 ORTHO05D005243 1.7e-67 261.5 801 30.0
Ah.07g203970 Amaranthus hybridus HOM05D004735 ORTHO05D005243 9.6e-66 255.8 730 32.1
Sed0022562 Sechium edule HOM05D004735 ORTHO05D005243 9.9e-63 245.7 783 28.9
Gohir.A11G063833 Gossypium hirsutum HOM05D004735 ORTHO05D005243 2.2e-62 244.6 449 40.3
THA.LOC104802362 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 2.9e-62 244.2 786 30.5
Aa31LG11G15430 Aethionema arabicum HOM05D004735 ORTHO05D005243 3.2e-61 240.7 772 29.0
Ca_08203_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 5.5e-61 240.0 690 30.4
SGA_v2.0_scaffold423G51443 Striga asiatica HOM05D004735 ORTHO05D005243 2.5e-58 231.1 652 33.4
PSO478G1205 Papaver somniferum HOM05D004735 ORTHO05D005243 4.8e-57 226.9 693 30.6
PSO017G6705 Papaver somniferum HOM05D004735 ORTHO05D005243 6.2e-57 226.5 693 30.9
Carub.0006s1214 Capsella rubella HOM05D004735 ORTHO05D005243 2.6e-55 221.1 747 27.7
TPR.G30897 Trifolium pratense HOM05D004735 ORTHO05D005243 1.3e-54 218.8 441 34.9
THA.LOC104821139 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 1.7e-54 218.4 765 29.3
AT5G13950 Arabidopsis thaliana HOM05D004735 ORTHO05D005243 6.5e-54 216.5 745 27.9
AL6G24610 Arabidopsis lyrata HOM05D004735 ORTHO05D005243 8.4e-54 216.1 748 27.8
MBI07_g13942_MAGBIO Magnolia biondii HOM05D004735 ORTHO05D005243 8.4e-54 216.1 701 28.1
Thhalv10012594m.g Eutrema salsugineum HOM05D004735 ORTHO05D005243 1.2e-52 212.2 755 27.4
Sp6g30050 Schrenkiella parvula HOM05D004735 ORTHO05D005243 2.1e-52 211.5 757 28.5
BolC9t59152H Brassica oleracea HOM05D004735 ORTHO05D005243 2.3e-51 208.0 715 28.7
A10p24440 Brassica napus HOM05D004735 ORTHO05D005243 5.7e-50 203.4 730 28.9
C09p63170 Brassica napus HOM05D004735 ORTHO05D005243 9.6e-50 202.6 714 28.7
Dinv33274 Davidia involucrata HOM05D004735 ORTHO05D005243 9.0e-48 196.1 179 58.7
Cc07_g01360 Coffea canephora HOM05D004735 ORTHO05D005243 1.0e-46 192.6 213 48.4
CARHR199450 Cardamine hirsuta HOM05D004735 ORTHO05D005243 1.7e-46 191.8 760 27.5
C03p07280 Brassica napus HOM05D004735 ORTHO05D005243 2.2e-46 191.4 731 29.4
BolC3t13230H Brassica oleracea HOM05D004735 ORTHO05D005243 5.0e-46 190.3 731 29.3
BraA10t44508Z Brassica rapa HOM05D000139 ORTHO05D005243 6.5e-46 189.9 672 29.0
TAR371G0169 Trochodendron aralioides HOM05D004735 ORTHO05D008917 7.4e-42 176.4 189 52.4
CSS0011678 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 4.8e-41 173.7 179 55.9
PGR042G1405 Punica granatum HOM05D004735 ORTHO05D005243 1.2e-39 169.1 730 28.2
BcaB01g05325 Brassica carinata HOM05D004735 ORTHO05D005243 5.9e-39 166.8 693 27.8
unitig_0.g1642 Utricularia gibba HOM05D004735 ORTHO05D005243 5.9e-31 140.2 462 29.0
CSS0009912 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 6.5e-30 136.7 99 68.7
TPR.G28482 Trifolium pratense HOM05D004735 ORTHO05D005243 7.2e-21 106.7 120 52.5
BcaC04g19065 Brassica carinata HOM05D004735 ORTHO05D005243 6.1e-20 103.6 321 28.7
Psat7g164720 Pisum sativum HOM05D000121 ORTHO05D000102 6.1e-20 103.6 101 55.4
BolC2t06598H Brassica oleracea HOM05D000139 ORTHO05D000103 3.0e-19 101.3 88 58.0
C02p06510 Brassica napus HOM05D000139 ORTHO05D000103 1.1e-18 99.4 88 56.8
CDE02G2610 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 2.7e-15 88.2 103 43.7
CDE06G2773 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 5.9e-15 87.0 115 39.1
CSS0016869 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.3e-14 85.9 89 57.3
ATR0582G141 Amborella trichopoda HOM05D004735 ORTHO05D005243 2.5e-13 81.6 261 29.1
Zm00001eb307010 Zea mays HOM05D004735 ORTHO05D005243 1.0e-11 76.3 136 35.3
Oeu062522.1 Olea europaea HOM05D004735 ORTHO05D005243 1.4e-11 75.9 152 34.9


User provided reference genes

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