Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 2.8e-183 645.2 332 100.0
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 6.0e-138 494.6 342 76.6
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.6e-133 479.2 327 75.8
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 4.9e-132 474.9 331 75.8
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.2e-131 471.9 333 73.9
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 7.1e-131 471.1 331 73.1
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 7.1e-131 471.1 334 73.7
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 1.6e-130 469.9 334 73.7
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.7e-130 469.2 334 73.4
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.0e-130 468.0 332 73.8
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 1.0e-129 467.2 335 74.0
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.8e-129 466.5 332 71.1
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 6.7e-129 464.5 300 79.3
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.5e-128 463.4 308 77.9
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 1.5e-128 463.4 333 70.9
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.9e-128 463.0 325 73.8
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 3.3e-128 462.2 304 78.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.3e-127 460.3 334 73.1
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.8e-127 459.1 327 72.2
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 3.7e-127 458.8 336 70.8
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 6.2e-127 458.0 333 71.2
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 8.1e-127 457.6 327 72.2
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.1e-126 457.2 333 70.0
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.4e-126 456.8 331 73.1
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.4e-126 456.8 327 70.9
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 2.4e-126 456.1 332 69.6
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 3.1e-126 455.7 302 76.5
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 4.0e-126 455.3 324 70.1
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 4.0e-126 455.3 325 71.4
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 5.3e-126 454.9 379 65.4
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 5.3e-126 454.9 319 74.3
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 9.0e-126 454.1 330 71.8
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 1.5e-125 453.4 331 71.6
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.5e-125 453.4 250 87.6
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 2.6e-125 452.6 331 70.7
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 3.4e-125 452.2 321 74.1
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 4.5e-125 451.8 334 71.6
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 2.2e-124 449.5 328 69.2
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 2.2e-124 449.5 333 70.9
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 3.8e-124 448.7 336 70.8
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 4.9e-124 448.4 328 70.4
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 6.4e-124 448.0 333 71.2
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.9e-123 446.4 327 70.0
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 2.4e-123 446.0 297 76.1
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 4.2e-123 445.3 256 84.8
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 4.2e-123 445.3 256 84.8
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 4.2e-123 445.3 331 69.5
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.5e-123 444.9 309 72.8
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 5.5e-123 444.9 335 69.0
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 5.5e-123 444.9 335 69.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 7.1e-123 444.5 306 75.2
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.6e-122 443.4 328 69.8
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 1.6e-122 443.4 332 69.6
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 2.1e-122 443.0 274 79.6
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 6.0e-122 441.4 252 83.7
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 7.9e-122 441.0 329 69.0
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.0e-121 440.7 324 68.8
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-121 440.3 331 68.0
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 1.8e-121 439.9 330 69.7
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.8e-121 439.9 313 72.2
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 2.3e-121 439.5 324 69.4
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.3e-121 439.5 309 71.8
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 2.3e-121 439.5 299 75.6
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 8.7e-121 437.6 308 73.7
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 1.5e-120 436.8 296 74.7
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 2.5e-120 436.0 313 72.2
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.5e-120 436.0 312 72.1
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 3.3e-120 435.6 327 69.1
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 1.6e-119 433.3 255 81.2
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 3.7e-119 432.2 325 69.2
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 4.8e-119 431.8 325 67.4
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 8.2e-119 431.0 333 67.9
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.4e-118 430.3 323 66.9
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.8e-118 429.9 250 81.2
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.4e-118 429.5 250 81.2
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 2.4e-118 429.5 272 77.2
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 2.4e-118 429.5 333 67.9
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 9.0e-118 427.6 313 69.3
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.7e-116 423.3 320 68.8
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.5e-115 419.5 314 69.1
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 7.1e-115 417.9 294 71.8
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 3.5e-114 415.6 303 70.0
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 6.0e-114 414.8 298 70.1
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 6.0e-114 414.8 298 70.1
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.0e-113 414.1 296 71.3
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.0e-113 414.1 296 71.3
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.3e-113 412.9 312 68.6
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 3.9e-113 412.1 256 78.1
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.5e-112 409.5 261 75.9
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 3.3e-112 409.1 295 71.2
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 4.3e-112 408.7 252 77.8
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.7e-112 408.3 294 72.4
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 2.8e-111 406.0 300 68.7
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 1.1e-110 404.1 301 68.8
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.8e-110 403.3 406 55.7
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 3.4e-109 399.1 299 67.2
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 5.9e-109 398.3 300 67.3
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 5.9e-109 398.3 251 76.9
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 7.6e-109 397.9 268 73.5
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.1e-107 394.0 263 73.0
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 4.6e-106 388.7 297 70.4
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.0e-105 387.5 262 71.8
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-105 386.7 293 69.3
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 2.4e-102 376.3 298 66.4
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 1.5e-101 373.6 306 64.7
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 5.9e-101 371.7 277 67.5
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 6.7e-97 358.2 249 68.7
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.4e-93 345.9 337 58.2
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 3.8e-92 342.4 332 57.2
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 1.6e-85 320.5 286 57.0
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 2.2e-84 316.6 230 70.9
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 7.2e-83 311.6 330 56.7
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 4.7e-82 308.9 331 56.8
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.8e-68 262.7 205 67.8
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 7.2e-67 258.5 182 74.2
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 1.2e-64 251.1 217 61.8
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.9e-63 245.7 205 65.4
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 6.3e-63 245.4 247 50.6
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 5.9e-61 238.8 256 47.7
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 2.3e-60 236.9 150 76.0
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 8.0e-58 228.4 236 49.2
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 1.2e-56 224.6 256 45.7
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 3.4e-56 223.0 192 61.5
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.8e-56 222.2 128 85.2
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.8e-56 222.2 128 85.2
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.0e-52 211.5 170 67.1
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 1.1e-51 208.0 272 42.3
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 3.6e-50 203.0 126 77.8
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 6.2e-50 202.2 109 86.2
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 8.1e-42 175.3 236 39.0
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 2.0e-40 170.6 247 39.7
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 2.3e-36 157.1 91 85.7
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 2.5e-35 153.7 142 57.7
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 8.1e-34 148.7 100 74.0
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 4.9e-31 139.4 108 67.6
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 7.8e-29 132.1 215 34.9
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.5e-27 127.9 94 70.2
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 4.7e-26 122.9 65 89.2
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-25 120.9 65 87.7
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 4.0e-25 119.8 65 87.7
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 2.1e-21 107.5 100 60.0
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 2.1e-21 107.5 100 60.0
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 2.1e-21 107.5 100 60.0
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.7e-20 104.4 84 65.5
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.7e-20 104.4 77 66.2
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 3.3e-19 100.1 154 41.6
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 6.2e-18 95.9 80 60.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 9.0e-17 92.0 52 82.7
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 4.5e-16 89.7 52 78.8
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 1.9e-14 84.3 47 83.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.2e-13 81.6 160 36.2
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.4e-09 68.2 46 65.2
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 8.4e-07 58.9 92 47.8


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