Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 2.8e-129 465.3 238 100.0
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 1.7e-81 306.6 237 69.6
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 7.7e-79 297.7 224 71.9
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.9e-77 293.1 214 72.0
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 3.2e-77 292.4 245 65.3
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 1.2e-76 290.4 191 73.8
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.6e-76 288.9 203 72.4
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 4.7e-76 288.5 190 76.3
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 6.1e-76 288.1 198 73.7
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 6.1e-76 288.1 189 75.7
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 6.1e-76 288.1 213 69.5
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 8.0e-76 287.7 213 67.6
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.0e-75 287.3 198 72.7
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.8e-75 286.6 203 70.9
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 2.3e-75 286.2 232 62.5
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.3e-75 286.2 203 71.9
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.0e-75 285.8 193 74.1
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 4.0e-75 285.4 192 74.5
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 8.8e-75 284.3 203 71.4
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.5e-74 283.5 192 71.9
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.5e-74 283.5 192 74.0
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.6e-74 282.7 197 72.6
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 3.4e-74 282.3 237 65.8
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 7.5e-74 281.2 189 73.5
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 2.2e-73 279.6 196 72.4
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 2.8e-73 279.3 188 73.4
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 6.3e-73 278.1 195 71.3
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 8.3e-73 277.7 177 79.1
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 8.3e-73 277.7 185 73.5
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 1.1e-72 277.3 193 71.0
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 2.4e-72 276.2 197 71.6
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 3.1e-72 275.8 197 71.1
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 9.1e-72 274.2 193 72.5
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 9.1e-72 274.2 196 73.5
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.6e-71 273.5 198 69.2
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.6e-71 273.5 189 68.8
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 2.0e-71 273.1 193 70.5
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.7e-71 272.7 195 69.2
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 3.5e-71 272.3 228 64.9
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 4.5e-71 271.9 217 67.7
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 4.5e-71 271.9 196 72.4
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 4.5e-71 271.9 191 73.3
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 7.7e-71 271.2 192 70.8
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 7.7e-71 271.2 196 70.9
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.3e-70 270.4 215 66.5
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.7e-70 270.0 212 63.2
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.7e-70 270.0 186 73.1
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 2.3e-70 269.6 228 64.9
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.3e-70 269.6 212 67.0
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 5.0e-70 268.5 225 63.6
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 1.9e-69 266.5 196 66.3
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 3.3e-69 265.8 243 61.3
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 4.2e-69 265.4 221 65.6
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 7.2e-69 264.6 184 72.8
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 9.5e-69 264.2 196 69.9
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.2e-68 263.8 197 66.0
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 1.2e-68 263.8 201 68.7
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 1.6e-68 263.5 216 62.0
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 2.1e-68 263.1 212 65.6
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 3.6e-68 262.3 182 72.5
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 1.0e-67 260.8 194 66.5
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.4e-67 260.4 194 65.5
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.4e-67 260.4 236 57.6
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 1.4e-67 260.4 214 62.6
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 2.3e-67 259.6 196 64.8
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 2.3e-67 259.6 189 66.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 5.2e-67 258.5 196 64.8
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 5.2e-67 258.5 196 64.8
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 8.9e-67 257.7 193 67.9
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.5e-66 256.9 196 64.8
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.5e-66 256.9 192 68.2
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 2.0e-66 256.5 196 63.8
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 3.4e-66 255.8 178 73.0
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 4.4e-66 255.4 226 60.6
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.7e-65 253.4 185 70.3
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.8e-65 252.7 175 72.6
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 3.7e-65 252.3 196 63.3
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 3.1e-64 249.2 189 68.3
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 7.0e-64 248.1 207 64.7
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 5.0e-62 241.9 234 58.1
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 8.6e-62 241.1 178 70.2
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 9.5e-61 237.7 178 69.1
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 4.0e-59 232.3 196 62.8
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 9.8e-58 227.6 191 68.6
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.4e-57 224.9 234 60.7
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.0e-56 221.5 232 60.8
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.6e-55 220.3 276 47.8
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 1.1e-53 214.2 197 57.4
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 8.0e-52 208.0 189 59.8
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 2.3e-51 206.5 140 74.3
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 4.0e-51 205.7 130 78.5
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 5.8e-50 201.8 134 76.1
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.3e-49 200.7 131 73.3
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 9.2e-48 194.5 183 56.3
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 1.7e-46 190.3 202 54.5
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.3e-46 189.9 121 77.7
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 6.6e-46 188.3 129 73.6
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 3.3e-45 186.0 119 77.3
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.3e-45 184.9 152 71.1
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.6e-44 183.7 142 66.2
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 2.6e-42 176.4 155 57.4
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.3e-41 174.1 152 69.1
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.4e-40 170.6 182 50.5
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 2.4e-40 169.9 145 64.1
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.2e-39 167.5 110 81.8
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.5e-37 160.6 214 41.1
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 2.1e-36 156.8 129 63.6
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 2.4e-35 153.3 107 72.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.2e-32 141.4 98 71.4
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.1e-27 127.9 88 69.3
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.8e-27 127.1 171 43.9
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.4e-24 117.5 191 37.7
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 5.3e-19 99.0 169 38.5
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 7.6e-18 95.1 86 62.8
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 8.7e-14 81.6 53 71.7
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.5e-13 80.1 55 63.6
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 2.6e-10 70.1 102 45.1
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 2.2e-09 67.0 47 66.0
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.1e-08 64.7 46 63.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.9e-08 63.9 49 67.3
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.2e-07 61.2 49 61.2
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 8.7e-06 55.1 59 50.8


User provided reference genes

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